Bernd Thiede

Image of Bernd Thiede
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Phone +47-22840533
Room 2128A
Username
Visiting address Blindernveien 31 0371 OSLO
Postal address Postboks 1066 Blindern 0316 OSLO

Academic interests

Mass spectrometry-based proteomics

Courses taught

Background

Proteomics

Awards

Appointments

Positions held

Partners

 

Tags: Proteomics, Mass spectrometry, Molecular Biology, Biochemistry, Proteomikk, Massespektrometri

Publications

  • Chollet, Maria Eugenia; Andersen, Elisabeth; Skarpen, Ellen; Myklebust, Christiane Filion; Koehler, Christian; Morth, Jens Preben; Chuansumrit, Ampaiwan; Pinotti, Mirko; Bernardi, Francesco; Thiede, Bernd; Sandset, Per Morten & Skretting, Grethe (2018). Factor VII deficiency: Unveiling the cellular and molecular mechanisms underlying Three model alterations of the enzyme catalytic domain. Biochimica et Biophysica Acta - Molecular Basis of Disease.  ISSN 0925-4439.  1864(3), s 660- 667 . doi: 10.1016/j.bbadis.2017.12.016
  • Pasovic, Lara; Utheim, Tor Paaske; Reppe, Sjur; Khan, Ayyad Ahmad Zartasht; Jackson, Catherine; Thiede, Bernd; Berg, Jens Petter; Messelt, Edvard Berger & Eidet, Jon Roger (2018). Improvement of storage medium for cultured human retinal pigment epithelial cells using factorial design. Scientific Reports.  ISSN 2045-2322.  8:5688, s 1- 17 . doi: 10.1038/s41598-018-24121-8 Full text in Research Archive.
  • Aqrawi, Lara Adnan; Galtung, Hilde; Vestad, Beate; Øvstebø, Reidun; Thiede, Bernd; Rusthen, Shermin; Young, Alix; Guerreiro, Eduarda; Utheim, Tor Paaske; Chen, Xiangjun; Utheim, Øygunn Aass; Palm, Øyvind & Jensen, Janicke Liaaen (2017). Identification of potential saliva and tear biomarkers in primary Sjögren’s syndrome, utilising the extraction of extracellular vesicles and proteomics analysis. Arthritis Research & Therapy.  ISSN 1478-6362.  19(1) . doi: 10.1186/s13075-017-1228-x Full text in Research Archive.
  • Barfeld, Stefan Jörg; Urbanucci, Alfonso; Itkonen, Harri; Fazli, Ladan; Hicks, Jessica L; Thiede, Bernd; Rennie, Paul S.; Yegnasubramanian, Srinivasan; DeMarzo, Angelo M. & Mills, Ian Geoffrey (2017). c-Myc antagonises the transcriptional activity of the androgen receptor in prostate cancer affecting key gene networks. EBioMedicine.  ISSN 2352-3964.  18, s 83- 93 . doi: 10.1016/j.ebiom.2017.04.006 Full text in Research Archive.
  • Grundt, Kirsten; Thiede, Bernd & Østvold, Anne Carine (2017). Identification of kinases phosphorylating 13 sites in the nuclear, DNA-binding protein NUCKS. Biochimica et Biophysica Acta - Proteins and Proteomics.  ISSN 1570-9639.  1865(3), s 359- 369 . doi: 10.1016/j.bbapap.2016.12.009
  • Haatveit, Hanne Merethe; Wessel, Øystein; Markussen, Turhan; Lund, Morten; Thiede, Bernd; Nyman, Ingvild Berg; Braaen, Stine; Dahle, Maria Krudtaa & Rimstad, Espen (2017). Viral protein kinetics of piscine orthoreovirus infection in atlantic salmon blood cells. Viruses.  ISSN 1999-4915.  9:49(3), s 1- 18 . doi: 10.3390/v9030049 Full text in Research Archive.
  • Imre, Gergely; Berthelet, Jean; Heering, Jan; Kehrloesser, Sebastian; Melzer, Inga Maria; Lee, Byung Il; Thiede, Bernd; Dötsch, Volker & Rajalingam, Krishnaraj (2017). Apoptosis inhibitor 5 is an endogenous inhibitor of caspase-2. EMBO Reports.  ISSN 1469-221X.  18(5), s 733- 744 . doi: 10.15252/embr.201643744 Full text in Research Archive.
  • Koehler, Christian; Bollineni, Ravi Chand & Thiede, Bernd (2017). Application of the half decimal place rule to increase the peptide identification rate. Rapid Communications in Mass Spectrometry.  ISSN 0951-4198.  31(2), s 227- 233 . doi: 10.1002/rcm.7780 Full text in Research Archive.
  • Lopez Soop, Graciela; Rønningen, Torunn; Rogala, Agnieszka; Richartz, Nina; Blomhoff, Heidi Kiil; Thiede, Bernd; Collas, Philippe & Küntziger, Thomas M. (2017). AKAP95 interacts with nucleoporin TPR in mitosis and is important for the spindle assembly checkpoint. Cell Cycle.  ISSN 1538-4101.  16(10), s 947- 956 . doi: 10.1080/15384101.2017.1310350
  • Stakkestad, Øystein; Lyngstadaas, Ståle Petter; Thiede, Bernd; Vondrasesek, Jiri; Skålhegg, Bjørn Steen & Reseland, Janne Elin (2017). Phosphorylation Modulates Ameloblastin Self-assembly and Ca2+ Binding. Frontiers in Physiology.  ISSN 1664-042X.  8 . doi: 10.3389/fphys.2017.00531 Full text in Research Archive.
  • Tran, Trung; Bollineni, Ravi Chand; Strozynski, Margarita Anna; Koehler, Christian & Thiede, Bernd (2017). Identification of Alternative Splice Variants Using Unique Tryptic Peptide Sequences for Database Searches. Journal of Proteome Research.  ISSN 1535-3893.  16(7), s 2571- 2578 . doi: 10.1021/acs.jproteome.7b00126
  • Tran, Trung; Strozynski, Margarita Anna & Thiede, Bernd (2017). Quantitative phosphoproteome analysis of cisplatin-induced apoptosis in Jurkat T cells. Proteomics.  ISSN 1615-9853.  17(11) . doi: 10.1002/pmic.201600470
  • Fiorito, Elisa; Sharma, Yogita; Gilfillan, Siv; Wang, Shixiong; Singh, Sachin Kumar; Somisetty, Venkata Satheesh; Madhumohan, Katika; Urbanucci, Alfonso; Thiede, Bernd; Mills, Ian Geoffrey & Rodriguez, Antoni Hurtado (2016). CTCF modulates Estrogen Receptor function through specific chromatin and nuclear matrix interactions. Nucleic Acids Research.  ISSN 0305-1048.  44, s 10588- 10602 . doi: 10.1093/nar/gkw785
  • Gerner, Lisa; Munack, Steffi; Temmerman, Koen; Lawrence-Dörner, Ann-Marie; Besir, Huseyin; Wilmanns, Matthias; Jensen, Jan Kristian; Thiede, Bernd; Mills, Ian Geoffrey & Morth, Jens Preben (2016). Data for the co-expression and purification of human recombinant CaMKK2 in complex with calmodulin in Escherichia coli. Data in Brief.  ISSN 2352-3409.  8, s 733- 740 . doi: 10.1016/j.dib.2016.06.033
  • Gerner, Lisa; Munack, Steffi; Temmerman, Koen; Lawrence-Dörner, Ann-Marie; Besir, Huseyin; Wilmanns, Matthias; Jensen, Jan Kristian; Thiede, Bernd; Mills, Ian Geoffrey & Morth, Jens Preben (2016). Using the fluorescent properties of STO-609 as a tool to assist structure-function analyses of recombinant CaMKK2. Biochemical and Biophysical Research Communications - BBRC.  ISSN 0006-291X.  476(2), s 102- 107 . doi: 10.1016/j.bbrc.2016.05.045
  • Olsen, Christel Moræus; Markussen, Turhan; Thiede, Bernd & Rimstad, Espen (2016). Infectious Salmon Anaemia Virus (ISAV) RNA Binding Protein Encoded by Segment 8 ORF2 and Its Interaction with ISAV and Intracellular Proteins. Viruses.  ISSN 1999-4915.  8(2) . doi: 10.3390/v8020052 Full text in Research Archive.
  • Arntzen, Magnus Øverlie; Boddie, Paul; Frick, Rahel; Koehler, Christian & Thiede, Bernd (2015). Consolidation of proteomics data in the Cancer proteomics database. Proteomics.  ISSN 1615-9853.  15(22), s 3765- 3771 . doi: 10.1002/pmic.201500144
  • Albrecht, Elke; Norheim, Frode; Thiede, Bernd; Holen, Torgeir; Ohashi, Tomoo; Schering, Lisa; Lee, Sindre; Brenmoehl, Julia; Thomas, Selina; Drevon, Christian A; Erickson, Harold P & Maak, Steffen (2015). Irisin - A myth rather than an exercise-inducible myokine. Scientific Reports.  ISSN 2045-2322.  5 . doi: 10.1038/srep08889
  • Albrecht, Elke; norheim, frode; Thiede, Bernd; Lee, Sindre; Holen, Torgeir; Ohashi,, Tomoo; Schering, Lisa; Brenmoehl, Julia; Thomas, Selina; Drevon, Christian A; Erickson, Harold P & Maak, Steffen (2015). Irisin – a myth rather than an exercise-inducible myokine. Scientific Reports.  ISSN 2045-2322. . doi: 10.1038/srep08889
  • Bollineni, Ravi Chand; Guldvik, Ingrid Jenny; Grönberg, Henrik; Wiklund, Fredrik; Mills, Ian Geoffrey & Thiede, Bernd (2015). A differential protein solubility approach for the depletion of highly abundant proteins in plasma using ammonium sulfate. The Analyst.  ISSN 0003-2654.  140(24), s 8109- 8117 . doi: 10.1039/c5an01560j
  • Bousquet, Paula; Sandvik, Joe Alexander; Arntzen, Magnus Øverlie; Jeppesen Edin, Nina F; Christoffersen, Stine; Krengel, Ute; Pettersen, Erik O & Thiede, Bernd (2015). Hypoxia Strongly Affects Mitochondrial Ribosomal Proteins and Translocases, as Shown by Quantitative Proteomics of HeLa Cells. International Journal of Proteomics.  ISSN 2090-2174. . doi: 10.1155/2015/678527
  • Chymkowitch, Pierre; Nguéa P, Aurélie; Aanes, Håvard; Koehler, Christian; Thiede, Bernd; Lorenz, Susanne; Meza, Leonardo Zepeda; Klungland, Arne & Enserink, Jorrit (2015). Sumoylation of Rap1 mediates the recruitment of TFIID to promote transcription of ribosomal protein genes. Genome Research.  ISSN 1088-9051.  25(6), s 897- 906 . doi: 10.1101/gr.185793.114
  • Koehler, Christian; Arntzen, Magnus Øverlie & Thiede, Bernd (2015). The impact of carbon-13 and deuterium on relative quantification of proteins using stable isotope diethyl labeling. Rapid Communications in Mass Spectrometry.  ISSN 0951-4198.  29(9), s 830- 836 . doi: 10.1002/rcm.7170
  • Serguienko, Anastassia; Grad, Iwona; Wennerstrøm, Anna; Meza, Leonardo Zepeda; Thiede, Bernd; Stratford, Eva Wessel; Myklebost, Ola & Munthe, Else (2015). Metabolic reprogramming of metastatic breast cancer and melanoma by Let-7a microRNA. OncoTarget.  ISSN 1949-2553.  6(4), s 2451- 2465 . doi: 10.18632/oncotarget.3235
  • Villa, Oscar; Brookes, Steven J; Thiede, Bernd; Heijl, Lars; Lyngstadaas, Ståle Petter & Reseland, Janne Elin (2015). Subfractions of enamel matrix derivative differentially influence cytokine secretion from human oral fibroblasts. Journal of Tissue Engineering.  ISSN 2041-7314.  6, s 1- 11 . doi: 10.1177/2041731415575857 Full text in Research Archive. Show summary
  • Øverbye, Anders; Skotland, Tore; Koehler, Christian; Thiede, Bernd; Seierstad, Therese; Berge, Viktor; Sandvig, Kirsten & Llorente, Alicia (2015). Identification of prostate cancer biomarkers in urinary exosomes. OncoTarget.  ISSN 1949-2553.  6(30), s 30357- 30376 . doi: 10.18632/oncotarget.4851
  • Frank, Matthias Johannes; Walter, Martin Sebastian; Rubert, Marina; Thiede, Bernd; Monjo Cabrer, Marta; Reseland, Janne Elin; Haugen, Håvard Jostein & Lyngstadaas, Ståle Petter (2014). Cathodic polarization coats titanium based implant materials with enamel matrix derivate (EMD). Materials.  ISSN 1996-1944.  7(3), s 2210- 2228 . doi: 10.3390/ma7032210 Full text in Research Archive. Show summary
  • Glowinski, Frithjof; Holland, Carsten; Thiede, Bernd; Jungblut, Peter R. & Meyer, Thomas (2014). Analysis of T4SS-induced signaling by H. pylori using quantitative phosphoproteomics. Frontiers in Microbiology.  ISSN 1664-302X.  5(JULY) . doi: 10.3389/fmicb.2014.00356
  • Haaland, Ingvild; Opsahl, Jill Anette; Berven, Frode; Reikvam, Håkon; Fredly, Hanne Kristin; Haugse, Ragnhild; Thiede, Bernd; McCormack, Emmet; Lain, Sonia; Bruserud, Øystein & Gjertsen, Bjørn Tore (2014). Molecular mechanisms of nutlin-3 involve acetylation of p53, histones and heat shock proteins in acute myeloid leukemia. Molecular Cancer.  ISSN 1476-4598.  13(1:116) . doi: 10.1186/1476-4598-13-116 Full text in Research Archive.
  • Oldenburg Ruppelt, Anja; Delbarre, Erwan; Thiede, Bernd; Vigouroux, Corinne & Collas, Philippe (2014). Deregulation of Fragile X-related protein 1 by the lipodystrophic lamin A p.R482W mutation elicits a myogenic gene expression program in preadipocytes. Human Molecular Genetics.  ISSN 0964-6906.  23(5), s 1151- 1162 . doi: 10.1093/hmg/ddt509
  • Pavlovic-Kozjak, Vera; Prell, F; Thiede, Bernd; Gotz, M; Wosiek, D; Ott, C & Rudel, T (2014). C1orf163/RESA1 is a novel mitochondrial intermembrane space protein connected to respiratory chain assembly. Journal of Molecular Biology.  ISSN 0022-2836.  426(4), s 908- 920 . doi: 10.1016/j.jmb.2013.12.001
  • Arczewska, Katarzyna; Tomazella, Gisele Guicardi; Lindvall, Jessica M.; Kassahun, Henok; Maglioni, Silvia; Torgovnick, Alessandro; Henriksson, Johan; Matilainen, Olli; Marquis, Bryce J.; Nelson, Bryant C.; Jaruga, Pawel; Babaie, Eshrat; Holmberg, Carina; Burglin, Thomas R.; Ventura, Natascia; Thiede, Bernd & Nilsen, Hilde (2013). Active Transcriptomic and Proteomic Reprogramming in the C. elegans Nucleotide Excision Repair Mutant xpa-1. Nucleic Acids Research.  ISSN 0305-1048.  41(10), s 5368- 5381 . doi: 10.1093/nar/gkt225
  • Arntzen, Magnus; Bull, Vibeke Hervik & Thiede, Bernd (2013). Cell Death Proteomics Database: Consolidating proteomics data on cell death. Journal of Proteome Research.  ISSN 1535-3893.  12(5), s 2206- 2213 . doi: 10.1021/pr4000703
  • Callaway, A.; Kostrzewa, M.; Willershausen, B.; Schmidt, F.; Thiede, Bernd; Küpper, H. & Kneist, S. (2013). Identification of Lactobacilli from Deep Carious Lesions by Means of Species-Specific PCR and MALDI-TOF Mass Spectrometry. Clinical Laboratory.  ISSN 1433-6510.  59(11-12), s 1373- 1379 . doi: 10.7754/Clin.Lab.2013.121225
  • Koehler, Christian; Arntzen, Magnus; De Souza, Gustavo Antonio & Thiede, Bernd (2013). An Approach for Triplex-Isobaric Peptide Termini Labeling (Triplex-IPTL). Analytical Chemistry.  ISSN 0003-2700.  85(4), s 2478- 2485 . doi: 10.1021/ac3035508
  • Moltu, Kristine; Bjørgo, Elisa; Berge, Torunn; Thiede, Bernd & Tasken, Kjetil (2013). A Proteomic Approach to Screening of Dynamic Changes in Detergent-Resistant Membranes from Activated Human Primary T Cells. Journal of Proteomics & Bioinformatics.  ISSN 0974-276X.  6, s 72- 80 . doi: 10.4172/jpb.1000264
  • Murrell, Wayne; Palmero, Emily Herrera; Bianco, John; Stangeland, Biljana; Joel, Mrinal; Paulson, Linda Marie; Thiede, Bernd; Grieg, Zanina Zilic; Ramsnes, Ingunn; Skjellegrind, Håvard Kjesbu; Nygård, Ståle; Brandal, Petter; Sandberg, Cecilie; Vik-Mo, Einar O.; Palmero, Sheryl & Langmoen, Iver Arne (2013). Expansion of Multipotent Stem Cells from the Adult Human Brain. PLoS ONE.  ISSN 1932-6203.  8(8) . doi: 10.1371/journal.pone.0071334
  • Størvold, Gro Leite; Landskron, Johannes; Strozynski, Margarita Anna; Arntzen, Magnus; Koehler, Christian; Kalland, Maria Elisabeth; Tasken, Kjetil & Thiede, Bernd (2013). Quantitative profiling of tyrosine phosphorylation revealed changes in the activity of the T cell receptor signaling pathway upon cisplatin-induced apoptosis. Journal of Proteomics.  ISSN 1874-3919.  91, s 344- 357 . doi: 10.1016/j.jprot.2013.07.019
  • Thiede, Bernd; Koehler, Christian; Strozynski, Margarita Anna; Treumann, Achim; Stein, Robert; Zimny-Arndt, Ursula; Schmid, Monika & Jungblut, Peter R. (2013). High Resolution Quantitative Proteomics of HeLa Cells Protein Species Using Stable Isotope Labeling with Amino Acids in Cell Culture(SILAC), Two-Dimensional Gel Electrophoresis(2DE) and Nano-Liquid Chromatograpohy Coupled to an LTQ-OrbitrapMass Spectrometer. Molecular & Cellular Proteomics.  ISSN 1535-9476.  12(2), s 529- 538 . doi: 10.1074/mcp.M112.019372
  • Tomazella, Gisele Guiqardi; Risberg, Kine; Mylvaganam, Haima; Lindemann, Paul Christoffer; Thiede, Bernd; De Souza, Gustavo Antonio & Wiker, Harald G (2012). Proteomic analysis of a multi-resistant clinical Escherichia coli isolate of unknown genomic background. Journal of Proteomics.  ISSN 1874-3919.  75(6), s 1830- 1837 . doi: 10.1016/j.jprot.2011.12.024
  • Arntzen, Magnus & Thiede, Bernd (2012). ApoptoProteomics, an Integrated Database for Analysis of Proteomics Data Obtained from Apoptotic Cells. Molecular & Cellular Proteomics.  ISSN 1535-9476.  11(2) . doi: 10.1074/mcp.M111.010447
  • Bull, Vibeke Hervik; Rajalingam, Krishnaraj & Thiede, Bernd (2012). Sorafenib-Induced Mitochondrial Complex I Inactivation and Cell Death in Human Neuroblastoma Cells. Journal of Proteome Research.  ISSN 1535-3893.  11(3), s 1609- 1620 . doi: 10.1021/pr200790e
  • Bull, Vibeke Hervik & Thiede, Bernd (2012). Proteome analysis of tunicamycin-induced ER stress. Electrophoresis.  ISSN 0173-0835.  33(12), s 1814- 1823 . doi: 10.1002/elps.201100565
  • Imre, Gergely; Heering, Jan; Takeda, Armelle-Natsuo; Husmann, Matthias; Thiede, Bernd; Heringdorf, Dagmar Meyer zu; Green, Douglas R; van der Goot, F Gisou; Sinha, Bhanu; Dötsch, Volker & Rajalingam, Krishnaraj (2012). Caspase-2 is an initiator caspase responsible for pore-forming toxin-mediated apoptosis. EMBO Journal.  ISSN 0261-4189.  31(11), s 2615- 2628 . doi: 10.1038/emboj.2012.93
  • Khan, R; Rukke, HV; Ricomini, AP; Fimland, G; Arntzen, Magnus; Thiede, Bernd & Petersen, Fernanda Cristina (2012). Extracellular Identification of a Processed Type II ComR/ComS Pheromone of Streptococcus mutans. Journal of Bacteriology.  ISSN 0021-9193.  194(15), s 3781- 3788 . doi: 10.1128/JB.00624-12
  • Koehler, Christian; Arntzen, Magnus; Treumann, Achim & Thiede, Bernd (2012). A Rapid Approach for Isobaric Peptide Termini Labeling. Methods in molecular biology.  ISSN 1064-3745.  893, s 129- 141 . doi: 10.1007/978-1-61779-885-6_10
  • Koehler, Christian; Arntzen, Magnus; Treumann, Achim & Thiede, Bernd (2012). Comparison of data analysis parameters and MS/MS fragmentation techniques for quantitative proteome analysis using isobaric peptide termini labeling (IPTL). Analytical and Bioanalytical Chemistry.  ISSN 1618-2642.  404(4), s 1103- 1114 . doi: 10.1007/s00216-012-5949-z
  • Ott, Christine; Ross, Katharina; Straub, Sebastian; Thiede, Bernd; Götz, Monika; Goosmann, Christian; Krischke, Markus; Mueller, Martin J.; Krohne, Georg; Rudel, Thomas & Kozjak-Pavlovic, Vera (2012). Sam50 Functions in Mitochondrial Intermembrane Space Bridging and Biogenesis of Respiratory Complexes. Molecular and Cellular Biology.  ISSN 0270-7306.  32(6), s 1173- 1188 . doi: 10.1128/MCB.06388-11
  • Patron, Juan P.; Fendler, Annika; Bild, Matthias; Jung, Ulrike; Müller, Henrik; Arntzen, Magnus; Piso, Chloe; Stephan, Carsten; Thiede, Bernd; Mollenkopf, Hans-Joachim; Jung, Klaus; Kaufmann, Stefan H.E. & Schreiber, Jörg (2012). MiR-133b Targets Antiapoptotic Genes and Enhances Death Receptor-Induced Apoptosis. PLoS ONE.  ISSN 1932-6203.  7(4) . doi: 10.1371/journal.pone.0035345
  • Tomazella, Gisele Guicardi; Kassahun, Henok; Nilsen, Hilde & Thiede, Bernd (2012). Quantitative Proteome Analysis Reveals RNA Processing Factors As Modulators of Ionizing Radiation-Induced Apoptosis in the C. elegans Germline. Journal of Proteome Research.  ISSN 1535-3893.  11(8), s 4277- 4288 . doi: 10.1021/pr300386z
  • Arntzen, Magnus; Koehler, Christian; Barsnes, Harald; Berven, Frode; Treumann, Achim & Thiede, Bernd (2011). IsobariQ: Software for Isobaric Quantitative Proteomics using IPTL, iTRAQ, and TMT. Journal of Proteome Research.  ISSN 1535-3893.  10(2), s 913- 920 . doi: 10.1021/pr1009977
  • Arntzen, Magnus; Koehler, Christian; Treumann, Achim & Thiede, Bernd (2011). Quantitative proteome analysis using isobaric peptide termini labeling (IPTL). Methods in molecular biology.  ISSN 1064-3745.  753, s 65- 76 . doi: 10.1007/978-1-61779-148-2_5
  • Arntzen, Magnus & Thiede, Bernd (2011). ApoptoProteomics: An integrated database for analysis of proteomics data obtained from apoptotic cells. Molecular & Cellular Proteomics.  ISSN 1535-9476.  10(12) . doi: 10.1074/mcp.M111.010447
  • De Souza, Gustavo; Arntzen, Magnus Øverlie; Fortuin, Suereta; Schürch, Anita; Målen, Hiwa; McEvoy, Christopher R; Van Soolingen, Dick; Thiede, Bernd; Warren, Robin M & Wiker, Harald G (2011). Proteogenomic analysis of polymorphisms and gene annotation divergences in prokaryotes using a clustered mass spectrometry-friendly database. Molecular & Cellular Proteomics.  ISSN 1535-9476.  10(1) . doi: 10.1074/mcp.M110.002527 Full text in Research Archive.
  • Koehler, Christian; Arntzen, Magnus; Strozynski, Margarita Anna; Treumann, Achim & Thiede, Bernd (2011). Isobaric Peptide Termini Labeling Utilizing Site-Specific N-Terminal Succinylation. Analytical Chemistry.  ISSN 0003-2700.  83(12), s 4775- 4781 . doi: 10.1021/ac200229w
  • Kolberg, Jan Isak; Ihle, Øistein; Thiede, Bernd & Aase, Audun (2011). Polyreactivity of Monoclonal Antibodies Made Against Human Erythrocyte Membranes with Various Pathogenic Bacteria. Hybridoma.  ISSN 0272-457X.  30(1), s 1- 9 . doi: 10.1089/hyb.2010.0062
  • Korvald, Hanne; Moe, Anne Margrethe Mølstad; Cederkvist, Fritjof Henning; Thiede, Bernd; Lærdahl, Jon Kristen; Bjørås, Magnar & Alseth, Ingrun (2011). Schizosaccharomyces pombe Ofd2 Is a Nuclear 2-Oxoglutarate and Iron Dependent Dioxygenase Interacting with Histones. PLoS ONE.  ISSN 1932-6203.  6(9) . doi: 10.1371/journal.pone.0025188
  • Kozielski, Frank; Riaz, Tahira; DeBonis, Salvatore; Koehler, Christian; Panse, Isabel; Strozynski, Margarita Anna; Donaldson, Ian Matthew; Thiede, Bernd & Kroening, Mario (2011). Proteome analysis of microtubule-associated proteins and their interacting partners from mammalian brain. Amino Acids.  ISSN 0939-4451.  41(2), s 363- 385 . doi: 10.1007/s00726-010-0649-5
  • Norheim, Frode; Raastad, Truls; Thiede, Bernd; Rustan, Arild; Drevon, Christian A & Haugen, Fred (2011). Proteomic identification of secreted proteins from human skeletal muscle cells and expression in response to strength training. American Journal of Physiology. Endocrinology and Metabolism.  ISSN 0193-1849.  301(5), s E1013- E1021 . doi: 10.1152/ajpendo.00326.2011
  • Saunders, Threrese Solstad; Bains, Simer Jit; Landskron, Johannes; Aandahl, Einar Martin; Thiede, Bernd; Tasken, Kjetil & Torgersen, Knut Martin (2011). CD147 (Basigin/Emmprin) identifies FoxP3(+)CD45RO(+)CTLA4(+)-activated human regulatory T cells. Blood.  ISSN 0006-4971.  118(19), s 5141- 5151 . doi: 10.1182/blood-2011-02-339242 Show summary
  • Schmidt, Frank; Dahlmann, Burkhardt; Hustoft, Hanne Kolsrud; Koehler, Christian; Strozynski, Margarita Anna; Kloss, Alexander; Zimny-Arndt, Ursula; Jungblut, Peter R. & Thiede, Bernd (2011). Quantitative proteome analysis of the 20S proteasome of apoptotic Jurkat T cells. Amino Acids.  ISSN 0939-4451.  41(2), s 351- 361 . doi: 10.1007/s00726-010-0575-6
  • Dørum, Siri; Arntzen, Magnus; Qiao, Shuo Wang; Holm, Anders; Koehler, Christian; Thiede, Bernd; Sollid, Ludvig Magne & Fleckenstein, Burkhard (2010). The Preferred Substrates for Transglutaminase 2 in a Complex Wheat Gluten Digest Are Peptide Fragments Harboring Celiac Disease T-Cell Epitopes. PLoS ONE.  ISSN 1932-6203.  5(11) . doi: 10.1371/journal.pone.0014056 Show summary
  • Jensen, D; Brønstad, Gunnar; Thiede, Bernd; Dunstan, H.; Lien, E.B.; Holmoy, T & Reichelt, Karl Ludvig (2010). Hyper-peptiduria in multiple sclerosis. Current Trends in Immunology.  ISSN 0972-4567.  (4), s 51- 60
  • Kozielski, Frank; Riaz, Tahira; DeBonis, Salvatore; Koehler, Christian; Kröning, Mario; Panse, Isabel; Strozynski, Margarita Anna; Donaldson, Ian M & Thiede, Bernd (2010). Proteome analysis of microtubule-associated proteins and their interacting partners from mammalian brain. Amino Acids.  ISSN 0939-4451. . doi: 10.1007/s00726-010-0649-5
  • Bull, Vibeke Hervik; Færgestad, Ellen Mosleth; Strozynski, Margarita Anna & Thiede, Bernd (2010). Temporal proteome profiling of taxol-induced mitotic arrest and apoptosis. Electrophoresis.  ISSN 0173-0835.  31(11), s 1873- 1885 . doi: 10.1002/elps.200900780
  • De Souza, Gustavo; Fortuin, Suereta; Aguilar, Diana; Pando, Rogelio Hernandez; McEvoy, Christopher R.E.; van Helden, Paul D.; Koehler, Christian J; Thiede, Bernd; Warren, Robin M & Wiker, Harald G (2010). Using a Label-free Proteomics Method to Identify Differentially Abundant Proteins in Closely Related Hypo- and Hypervirulent Clinical Mycobacterium tuberculosis Beijing Isolates. Molecular & Cellular Proteomics.  ISSN 1535-9476.  9(11), s 2414- 2423 . doi: 10.1074/mcp.M900422-MCP200 Show summary
  • Jehmlich, N; Fetzer, I; Seifert, J.; Mattow, J.; Vogt, C.; Harms, H.; Thiede, Bernd; Richnow, H. H.; von Bergen, M. & Schmidt, Frank (2010). Decimal Place Slope, A Fast and Precise Method for Quantifying 13C Incorporation Levels for Detecting the Metabolic Activity of Microbial Species. Molecular & Cellular Proteomics.  ISSN 1535-9476.  (9), s 1221- 1227 . doi: 10.1074/mcp.M900407-MCP200
  • Saunders, Threrese Solstad; Bjørgo, Elisa; Koehler, Christian; Strozynski, Margarita Anna; Torgersen, Knut Martin; Tasken, Kjetil & Thiede, Bernd (2010). Quantitative proteome analysis of detergent-resistant membranes identifies the differential regulation of protein kinase C isoforms in apoptotic T cells. Proteomics.  ISSN 1615-9853.  10(15), s 2758- 2768 . doi: 10.1002/pmic.201000164
  • Schmidt, Frank; Dahlmann, Burkhardt; Hustoft, Hanne Kolsrud; Koehler, Christian; Strozynski, Margarita Anna; Klof, Alexander; Zimmy-Arndt, Ursula; Jungblut, Peter R. & Thiede, Bernd (2010). Quantitative proteome analysis of the 20S proteasome of apoptotic Jurkat T cells. Amino Acids.  ISSN 0939-4451. . doi: 10.1007/s00726-010-0575-6
  • Tomazella, Gisele Guiqardi; daSilva, Idalete; Thomé, Carolina H.; Greene, Lewis J; Koehler, Christian J; Thiede, Bernd; Wiker, Harald G & De Souza, Gustavo (2010). Analysis of detergent-insoluble and whole cell lysate fractions of resting neutrophils using high-resolution mass spectrometry. Journal of Proteome Research.  ISSN 1535-3893.  9(4), s 2030- 2036 . doi: 10.1021/pr1000253 Show summary
  • Treumann, A & Thiede, Bernd (2010). Isobaric protein and peptide quantification: perspectives and issues. Espert Review of Proteomics.  ISSN 1478-9450.  7(5), s 647- 653 . doi: 10.1586/EPR.10.29
  • de Souza, GA; De Souza, Gustavo; Søfteland, Tina; Softeland, T; Koehler, Christian J; Thiede, Bernd & Wiker, Harald G (2009). Validating divergent ORF annotation of the Mycobacterium leprae genome through a full translation dataset and peptide identification by tandem mass spectrometry. Proteomics.  ISSN 1615-9853.  9(12), s 3233- 3243 . doi: 10.1002/pmic.200800955 Show summary
  • Koehler, Christian; Strozynski, Margarita Anna; Kozielski, F; Treumann, A & Thiede, Bernd (2009). Isobaric Peptide Termini Labeling for MS/MS-Based Quantitative Proteomics. Journal of Proteome Research.  ISSN 1535-3893.  8(9), s 4333- 4341 . doi: 10.1021/pr900425n
  • Preza, Dorita; Thiede, Bernd; Olsen, Ingar & Grinde, Bjørn (2009). The proteome of the human parotid gland secretion in elderly with and without root caries. Acta Odontologica Scandinavica.  ISSN 0001-6357.  67(3), s 161- 169 . doi: 10.1080/00016350902751545
  • Schmidt, F; Schmid, M; Thiede, Bernd; Pleissner, KP; Bohme, M & Jungblut, PR (2009). Assembling proteomics data as a prerequisite for the analysis of large scale experiments. Chemistry Central Journal.  ISSN 1752-153X.  3 . doi: 10.1186/1752-153X-3-2
  • Schmidt, Frank; Fiege, T; Hustoft, Hanne Kolsrud; Kneist, S & Thiede, Bernd (2009). Shotgun mass mapping of Lactobacillus species and subspecies from caries related isolates by MALDI-MS. Proteomics.  ISSN 1615-9853.  9(7), s 1994- 2003 . doi: 10.1002/pmic.200701028

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  • Sved Skottvoll, Frøydis; Lund, Kaja; Røberg-Larsen, Hanne; Berg, Henriette Sjånes; Thiede, Bernd; Lundanes, Elsa & Wilson, Steven Ray Haakon (2017). Diagnostic potential of exosomes: The purification issue.
  • Jensen, Janicke Liaaen; Utheim, Øygunn Aass; Chen, Xiangjun; Thiede, Bernd; Aqrawi, Lara Adnan; Rusthen, Shermin; Young, Alix; Utheim, Tor Paaske & Galtung, Hilde (2016). Searching for Disease Biomarkers for Primary Sjögren’s Syndrome Based on Oral and Ocular Patient Examinations.
  • Jungblut, Peter R.; Thiede, Bernd & Schluter, H (2016). Towards deciphering proteomes via the proteoform, protein speciation, moonlighting and protein code concepts. Journal of Proteomics.  ISSN 1874-3919.  134, s 1- 4 . doi: 10.1016/j.jprot.2016.01.012
  • Lopez Soop, Graciela; Reiner, Andrew Henry; Thiede, Bernd; Collas, Philippe & Küntziger, Thomas Michel (2015). Regulation of Normal Mitotic Progression by A-kinase Anchoring Protein 95 (AKAP95).
  • Bousquet, Paula; Abshiru, Nebiyu; Sandvik, Joe Alexander; Pettersen, Erik O; Thiede, Bernd; Woods, Robert; Moreno, Ernesto & Krengel, Ute (2014). Anti-tumor antibodies and hypoxia.
  • Perdreau, Harmonie; Guldsten, Hanne; Progida, Cinzia; Thiede, Bernd; Bakke, Oddmund & Morth, Jens Preben (2014). Molecular and Structural Characterization of Sjögren syndrome/scleroderma autoantigen 1 (SSSCA1)..
  • Perdreau, Harmonie; Barfeld, Stefan; Guldsten, Hanne; Thiede, Bernd; Mills, Ian Geoffrey & Morth, Jens Preben (2013). Molecular and Structural Characterization of Sjögren syndrome/scleroderma autoantigen 1, a new binding partner of Tankyrase regulated by the oncogene c-Myc.
  • Arntzen, Magnus & Thiede, Bernd (2013). Cell Death Proteomics.
  • Bousquet, Paula; Abshiru, Nebiyu; Johansen, Rune Forstrøm; Bjørås, Magnar; Sandvik, Joe Alexander; Pettersen, Erik O; Thiede, Bernd; Woods, Robert; Moreno, Ernesto & Krengel, Ute (2013). A structural and functional study of anti-ganglioside antibodies. International Journal of Molecular Medicine.  ISSN 1107-3756.  32, s S42- S42 Show summary
  • Köhler, Christian Jeffrey; Thiede, Bernd; Lundanes, Elsa & Greibrokk, Tyge (2013). Isobaric peptide termini labeling (IPTL) - An alternative approach for quantitative proteomics.
  • Arntzen, Magnus & Thiede, Bernd (2012). ApoptoProteomics: An integrated database for analysis of proteomics data obtained from apoptotic cells.
  • Arntzen, Magnus & Thiede, Bernd (2012). Apoptoproteomics.
  • Bousquet, Paula; Thiede, Bernd; Moreno, Ernesto & Krengel, Ute (2012). Antitumor antibodies - Crystallization and MS analysis.
  • Demko, Viktor; Ako, Ako Eugene; Perroud, Pierre-Francois; Liang, Zhe; Johansen, Wenche; Wilson, Robert; Shalchian-Tabrizi, Kamran; Thiede, Bernd; Quatrano, Ralph & Olsen, Odd-Arne (2012). Searching for cellular targets of the plant calpain DEK1.
  • Khan, Rabia; Rukke, Håkon Valen; Filho, Antonio Pedro Ricomini; Fimland, Gunnar; Arntzen, Magnus; Thiede, Bernd & Petersen, Fernanda Cristina (2012). Extracellular Identification of a Processed Type II ComR/ComS Pheromone of Streptococcus mutans. Journal of Bacteriology.  ISSN 0021-9193.  194(15), s 3781- 3788 . doi: 10.1128/​JB.00624-12 Full text in Research Archive.
  • Thiede, Bernd; Koehler, Christian; Strozynski, Margarita Anna; Treumann, A; Stein, Robert; Zimny-Amdt, Ursula; Schmid, Monika & Jungblut, Peter R. (2012). Protein species high resolution quantitative proteomics of HeLa cells using SILAC-2-DE-nanoLC/LTQ-Orbitrap mass spectrometry. Molecular & Cellular Proteomics.  ISSN 1535-9476. . doi: 10.1074/mcp.M112.019372
  • Arntzen, Magnus; Koehler, Christian; Barsnes, Harald; Berven, Frode; Treumann, Achim & Thiede, Bernd (2011). IsobariQ: Software for isobaric quantitative proteomics using IPTL, iTRAQ and TMT.
  • Bousquet, Paula; Thiede, Bernd; Moreno, Ernesto & Krengel, Ute (2011). Antitumor antibodies – Crystallization and MS analysis.
  • Tasken, Kjetil; Saunders, Threrese Solstad; Torgersen, Knut Martin; Aandahl, Einar Martin; Thiede, Bernd; Bains, Simer Jit; Landskron, Johannes; Hagness, Morten; Henjum, Karen; Foss, Aksel & Bjørnbeth, Bjørn Atle (2011). Method and compositions for identifying activated regulatory T cells.
  • Arntzen, Magnus & Thiede, Bernd (2010). IsobariQ.
  • Holland, C; Schmid, M; Zimny-Arndt, U; Thiede, Bernd; Jungblut, PR & Meyer, TF (2010). Host cell phosphoproteomics in response to H. pylori infection. European Journal of Cell Biology.  ISSN 0171-9335.  89, s 5- 5
  • Norheim, Frode; Raastad, Truls; Thiede, Bernd; Drevon, Christian A & Haugen, Fred (2010). The human skeletal muscle secretome - identification of the most abundantly secreted proteins in vitro and their regulation in response to training in vivo. Cardiovascular Research.  ISSN 0008-6363.  87, s S120- S120
  • Callaway, A; Kneist, S; Schmidt, Frank; Willershausen, B; Rupf, S; Wicht, M & Thiede, Bernd (2009). Diversity of Lactobacillus species in deep carious lesions of deciduous molars. International Journal of Medical Microbiology.  ISSN 1438-4221.  299, s 51- 51
  • De Souza, Gustavo; Fortuin, Suereta; McEvoy, Christopher R; Pando, Rogelio Hernandez; Koehler, Christian J; Thiede, Bernd; Warren, Robin M & Wiker, Harald G (2009). A label-free method identified differentially abundant proteins in related M.tuberculosis Beijing strains.

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Published Nov. 12, 2015 3:21 PM - Last modified June 7, 2018 8:30 PM

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