Ståle Nygård

Image of Ståle Nygård
Norwegian version of this page
Phone +47-22840863
Mobile phone 95129127 95129127
Room 10463
Username
Visiting address Ole Johan Dahls Hus Gaustadalléen 23 B N-0373 OSLO
Postal address Postboks 1080 Blindern 0316 OSLO

Academic Interests

Bioinformatics, biostatistics, functional genomics, pathways, microarrays 

Teaching

  • http://www.uio.no/studier/emner/matnat/ibv/MBV-INF4410/

  • http://www.uio.no/studier/emner/matnat/ifi/INF-BIO5120/index-eng.html

  • http://www.uio.no/studier/emner/matnat/ibv/MBV3070/

Higher education and employment history

PhD in statistics, Dept of Mathematics, UiO (2008)

Other

Heading the helpdesk of the Norwegian Bioinformatics Platform, which is a part of the pan-European research infrastructure ELIXIR.

Training coordinator of the Norwegian ELIXIR node

Profile at google scholar (more up to date than Cristin)

Publications

  • de Vries, Elisabeth M.G.; Färkkilä, Martti; Milkiewicz, Piotr; Hov, Johannes Espolin Roksund; Eksteen, Bertus; Thorburn, Douglas; Chazouillères, Olivier; Pares, Albert; Nygård, Ståle; Gilja, Odd Helge; Wunsch, Ewa; Invernizzi, Pietro; Carbone, Marco; Bernuzzi, Francesca; Boberg, Kirsten Muri; Røsjø, Helge; Rosenberg, William; Beuers, Ulrich H.; Ponsioen, Cyriel Y.; Karlsen, Tom Hemming & Vesterhus, Mette (2017). Enhanced liver fibrosis test predicts transplant-free survival in primary sclerosing cholangitis, a multi-centre study. Liver international (Print).  ISSN 1478-3223.  37(10), s 1554- 1561 . doi: 10.1111/liv.13402
  • Landin, Maria Augusta Dos S Silva; Mariussen, Espen; Nygård, Ståle; Berger, Urs & Osmundsen, Harald (2017). Effects of HBCD on hepatic gene expression of wilde-type and PPAR-a -/- mice.. Frontiers in Genetics.  ISSN 1664-8021.
  • Melvær, Giil Lasse; Vedeler, Christian A.; Kristoffersen, Einar Klæboe; Nordrehaug, Jan Erik; Heidecke, Harald; Dechend, Ralf; Schulze-Forster, Kai; Muller, Dominik N.; Von Goetze, Victoria S.; Cabral-Marques, Otavio; Riemekasten, Gabriela; Vogelsang, Petra; Nygård, Ståle; Lund, Anders & Aarsland, Dag (2017). Antibodies to signaling molecules and receptors in Alzheimer's disease are associated with psychomotor slowing, depression, and poor visuospatial function. Journal of Alzheimer's Disease.  ISSN 1387-2877.  59(3), s 929- 939 . doi: 10.3233/JAD-170245
  • Vesterhus, Mette; Holm, Anders; Hov, Johannes Espolin Roksund; Nygård, Ståle; Schrumpf, Erik; Melum, Espen; Thorbjørnsen, Liv Wenche; Paulsen, Vemund; Lundin, Knut Erik Aslaksen; Dale, Inge; Gilja, Odd Helge; Zweers, Serge J.; Vatn, Morten H; Schaap, Frank G.; Jansen, Peter L.M.; Ueland, Thor; Røsjø, Helge; Moum, Bjørn; Ponsioen, Cyriel Y.; Boberg, Kirsten Muri; Färkkilä, Martti; Karlsen, Tom Hemming & Lund-Johansen, Fridtjof (2017). Novel serum and bile protein markers predict primary sclerosing cholangitis disease severity and prognosis. Journal of Hepatology.  ISSN 0168-8278.  66(6), s 1214- 1222 . doi: 10.1016/j.jhep.2017.01.019
  • Ferrante, Linda; Rognum, Torleiv Ole; Vege, Åshild; Nygård, Ståle & Opdal, Siri Hauge (2016). Altered gene expression and possible immunodeficiency in cases of sudden infant death syndrome. Pediatric Research.  ISSN 0031-3998.  80(1), s 77- 84 . doi: 10.1038/pr.2016.45
  • Kummen, Martin; Holm, Kristian; Anmarkrud, Jarl Andreas; Nygård, Ståle; Vesterhus, Mette; Høivik, Marte; Trøseid, Marius; Marschall, Hanns-Ulrich; Schrumpf, Erik; Moum, Bjørn; Røsjø, Helge; Aukrust, Pål; Karlsen, Tom Hemming & Hov, Johannes Espolin Roksund (2016). The gut microbial profile in patients with primary sclerosing cholangitis is distinct from patients with ulcerative colitis without biliary disease and healthy controls. Gut.  ISSN 0017-5749.  66(4), s 611- 619 . doi: 10.1136/gutjnl-2015-310500 Show summary
  • Lyngbakken, Magnus Nakrem; Røsjø, Helge; Holmen, Oddgeir; Nygård, Ståle; Dalen, Håvard; Hveem, Kristian & Omland, Torbjørn (2016). Gender, High-Sensitivity Troponin I, and the Risk of Cardiovascular Events (from the Nord-Trøndelag Health Study).. American Journal of Cardiology.  ISSN 0002-9149.  118(6), s 816- 821 . doi: 10.1016/j.amjcard.2016.06.043
  • Lyngbakken, Magnus Nakrem; Skranes, Julia Brox; de Lemos, JA; Nygård, Ståle; Dalen, Håvard; Hveem, Kristian; Røsjø, Helge & Omland, Torbjørn (2016). Impact of Smoking on Circulating Cardiac Troponin I Concentrations and Cardiovascular Events in the General Population: The HUNT Study (Nord-Trøndelag Health Study).. Circulation.  ISSN 0009-7322.  134(24), s 1962- 1972 . doi: 10.1161/CIRCULATIONAHA.116.023726 Show summary
  • Myhre, Peder Langeland; Ottesen, Anett Hellebø; Okkonen, Marjatta; Linko, Rita; Stridsberg, Mats; Nygård, Ståle; Christensen, Geir Arve; Pettilä, Ville; Omland, Torbjørn & Røsjø, Helge (2016). Prognostic value of secretoneurin in patients with acute respiratory failure:Data from the FINNALI study. Clinical Chemistry.  ISSN 0009-9147.  62(10), s 1380- 1389 . doi: 10.1373/clinchem.2016.258764
  • Ramberg, Håkon Andre; Grytli, Helene Hartvedt; Nygård, Ståle; Wang, Wanzhong; Øgren, Hans Olav; Zhao, Sen; Løvf, Marthe; Katz, Betina; Skotheim, Rolf I.; Bjartell, Anders; Eri, Lars Magne; Berge, Viktor; Svindland, Aud & Tasken, Kristin Austlid (2016). PBX3 is a putative biomarker of aggressive prostate cancer. International Journal of Cancer.  ISSN 0020-7136.  139(8), s 1810- 1820 . doi: 10.1002/ijc.30220
  • Røsjø, Helge; Stridsberg, Mats; Ottesen, Anett Hellebø; Nygård, Ståle; Christensen, Geir Arve; Pettilä, Ville; Linko, Rita; Karlsson, Sari; Varpula, Tero; Ruokonen, Esko & Omland, Torbjørn (2016). Prognostic Value of Secretoneurin in Critically Ill Patients with Infections. Critical Care Medicine.  ISSN 0090-3493.  44(10), s 1882- 1890 . doi: 10.1097/CCM.0000000000001832
  • Skarpengland, Tonje; Holm, Sverre; Scheffler, Katja; Gregersen, Ida; Dahl, Tuva Børresdatter; Suganthan, Rajikala; Segers, Filip; Østlie, Ingunn; Otten, Jeroen J.T.; Gomez, Luisa Fernanda Luna; Ketelhuth, Daniel F.J.; Lundberg, Anna M.; Neurauter, Christine Gran; Hildrestrand, Gunn Annette; Skjelland, Mona; Bjørndal, Bodil; Svardal, Asbjørn M.; Iversen, Per Ole; Hedin, Ulf; Nygård, Ståle; Olstad, Ole Kristoffer; Krohg-Sørensen, Kirsten; Slupphaug, Geir; Eide, Lars; Kusnierczyk, Anna; Folkersen, Lasse; Ueland, Thor; Berge, Rolf Kristian; Hansson, Göran K.; Biessen, Erik A.L.; Halvorsen, Bente; Bjørås, Magnar & Aukrust, Pål (2016). Neil3-dependent base excision repair regulates lipid metabolism and prevents atherosclerosis in Apoe-deficient mice. Scientific Reports.  ISSN 2045-2322.  6:28337 . doi: 10.1038/srep28337
  • Bergseng, Elin; Dørum, Siri; Arntzen, Magnus; Nielsen, Morten; Nygård, Ståle; Buus, Søren; De Souza, Gustavo Antonio & Sollid, Ludvig Magne (2015). Different binding motifs of the celiac disease-associated HLA molecules DQ2.5, DQ2.2, and DQ7.5 revealed by relative quantitative proteomics of endogenous peptide repertoires. Immunogenetics.  ISSN 0093-7711.  67(2), s 73- 84 . doi: 10.1007/s00251-014-0819-9
  • Brynildsen, Jon; Høiseth, Arne Didrik; Nygård, Ståle; Hagve, Tor-Arne; Christensen, Geir Arve; Omland, Torbjørn & Røsjø, Helge (2015). Diagnostisk treffsikkerhet for hjertesvikt – data fra Akershus hjerteundersøkelse 2. Tidsskrift for Den norske legeforening.  ISSN 0029-2001.  135(19), s 1738- 1744 . doi: 10.4045/tidsskr.14.1174
  • Hillestad, Vigdis; Espe, Emil Knut Stenersen; Fadila, Cero; Larsen, Karl-Otto; Sjaastad, Ivar; Nygård, Ståle; Skjønsberg, Ole Henning & Christensen, Geir Arve (2015). IL-18 neutralization during alveolar hypoxia improves left ventricular diastolic function in mice. Acta Physiologica.  ISSN 1748-1708.  213(2), s 492- 504 . doi: 10.1111/apha.12376
  • Landin, Maria Augusta Dos S Silva; Nygård, Ståle; Shabestari, Maziar; Babaie, Eshrat; Reseland, Janne Elin & Osmundsen, Harald (2015). Mapping the global mRNA transcritome during development of the murine first molar. Frontiers in Genetics.  ISSN 1664-8021.  6(47) . doi: 10.3389/fgene.2015.00047 Full text in Research Archive. Show summary
  • Lau, Corinna; Nygård, Ståle; Fure, Hilde; Olstad, Ole Kristoffer; Holden, Marit; Lappegård, Knut Tore; Brekke, Ole Lars; Espevik, Terje; Hovig, Johannes Eivind & Mollnes, Tom Eirik (2015). CD14 and complement crosstalk and largely mediate the transcriptional response to Escherichia coli in human whole blood as revealed by DNA microarray. PLoS ONE.  ISSN 1932-6203.  10(2) . doi: 10.1371/journal.pone.0117261 Full text in Research Archive. Show summary
  • Lau, Corinna; Olstad, Ole Kristoffer; Holden, Marit; Nygård, Ståle; Fure, Hilde; Lappegård, Knut Tore; Brekke, Ole Lars; Espevik, Terje; Hovig, Johannes Eivind & Mollnes, Tom Eirik (2015). Gene expression profiling of Gram-negative bacteria-induced inflammation in human whole blood: The role of complement and CD14-mediated innate immune response. Genomics Data.  ISSN 2213-5960.  5, s 176- 183 . doi: 10.1016/j.gdata.2015.05.019 Full text in Research Archive.
  • Omland, Torbjørn; De Lemos, James A; Holmen, Oddgeir; Dalen, Håvard; Saltyte Benth, Jurate; Nygård, Ståle; Hveem, Kristian & Røsjø, Helge (2015). Impact of sex on the prognostic value of high-sensitivity cardiac troponin I in the general population: The HUNT study. Clinical Chemistry.  ISSN 0009-9147.  61(4), s 646- 656 . doi: 10.1373/clinchem.2014.234369
  • Ottesen, Anett Hellebø; Louch, William Edward; Carlson, Cathrine Rein; Landsverk, Ole J. B.; Kurola, Jouni; Johansen, Rune Forstrøm; Moe, Morten Kaare; Aronsen, Jan Magnus; Høiseth, Arne Didrik; Jarstadmarken, Hilde; Nygård, Ståle; Bjørås, Magnar; Sjaastad, Ivar; Pettilä, Ville; Stridsberg, Mats; Omland, Torbjørn; Christensen, Geir Arve & Røsjø, Helge (2015). Secretoneurin is a novel prognostic cardiovascular biomarker associated with cardiomyocyte calcium handling. Journal of the American College of Cardiology.  ISSN 0735-1097.  65(4), s 339- 351 . doi: 10.1016/j.jacc.2014.10.065
  • Ricanek, Petr; Lunde, Lisa Kristina; Frye, Stephan Alfons; Støen, Mari; Nygård, Ståle; Morth, Jens Preben; Rydning, Andreas; Vatn, Morten H; Amiry-Moghaddam, Mahmood & Tonjum, Tone (2015). Reduced expression of aquaporins in human intestinal mucosa in early stage inflammatory bowel disease. Clinical and Experimental Gastroenterology.  ISSN 1178-7023.  8, s 49- 67 . doi: 10.2147/CEG.S70119
  • Stangeland, Biljana; Mughal, Awais; Grieg, Zanina Zilic; Sandberg, Cecilie; Joel, Mrinal; Nygård, Ståle; Meling, Torstein Ragnar; Murrell, Wayne; Vik-Mo, Einar O. & Langmoen, Iver Arne (2015). Combined expressional analysis, bioinformatics and targeted proteomics identify new potential therapeutic targets in glioblastoma stem cells. OncoTarget.  ISSN 1949-2553.  6(28), s 26192- 26215 . doi: 10.18632/oncotarget.4613
  • Vesterhus, Mette; Hov, Johannes Espolin Roksund; Holm, Anders; Schrumpf, Erik; Nygård, Ståle; Godang, Kristin; Andersen, Ina Marie; Næss, Sigrid; Thorburn, Douglas; Saffioti, Francesca; Vatn, Morten; Gilja, Odd Helge; Lund-Johansen, Fridtjof; Syversveen, Trygve; Braband, Knut; Parés, Albert; Ponsioen, Cyriel Y.; Pinzani, Massimo; Färkkilä, Martti; Moum, Bjørn; Ueland, Thor; Røsjø, Helge; Rosenberg, William; Boberg, Kirsten Muri & Karlsen, Tom Hemming (2015). Enhanced liver fibrosis score predicts transplant-free survival in primary sclerosing cholangitis. Hepatology.  ISSN 0270-9139.  62(1), s 188- 197 . doi: 10.1002/hep.27825
  • Nygård, Ståle; Reitan, Trond; Clancy, Trevor; Nygaard, Vegard; BJØRNSTAD, JOHANNES; Skrbic, Biljana; Tønnessen, Theis; Christensen, Geir Arve & Hovig, Johannes Eivind (2014). Identifying pathogenic processes by integrating microarray data with prior knowledge. BMC Bioinformatics.  ISSN 1471-2105.  15(1) . doi: 10.1186/1471-2105-15-115
  • Wollen, Embjørg Julianne; Kwinta, Przemko; Bik-Multanowski, Miroslaw; Madetko-Talowska, Anna; Sejersted, Yngve; Wright, Marianne; Günther, Clara-Cecilie; Nygård, Ståle; Saugstad, Ola Didrik & Pietrzyk, Jacek Jozef (2014). Hypoxia-reoxygenation affects whole-genome expression in the newborn eye. Investigative Ophthalmology and Visual Science.  ISSN 0146-0404.  55(3), s 1393- 1401 . doi: 10.1167/iovs.13-13159 Show summary
  • Wollen, Embjørg Julianne; Sejersted, Yngve; Wright, Marianne; Madetko-Talowska, Anna; Bik-Multanowski, Miroslaw; Kwinta, Przemko; Günther, Clara-Cecilie; Nygård, Ståle; Løberg, Else Marit; Ystgaard, Martin Bogale; Pietrzyk, Jacek J. & Saugstad, Ola Didrik (2014). Transcriptome profiling of the newborn mouse brain after hypoxia-reoxygenation: Hyperoxic reoxygenation induces inflammatory and energy failure responsive genes. Pediatric Research.  ISSN 0031-3998.  75(4), s 517- 526 . doi: 10.1038/pr.2013.249 Show summary
  • Wu, Xueping; Sagave, Julia Fritzi; Rutkovskiy, Arkady; Haugen, Fred; Baysa, Anton; Nygård, Ståle; Czibik, Gabor Tamas; Dahl, Christen Peder; Gullestad, Lars; Vaage, Ingvar Jarle & Valen, Guro (2014). Expression of bone morphogenetic protein 4 and its receptors in the remodeling heart. Life Sciences.  ISSN 0024-3205.  97(2), s 145- 154 . doi: 10.1016/j.lfs.2013.12.030
  • Sandve, Geir Kjetil; Gundersen, Sveinung; Johansen, Morten; Glad, Ingrid Kristine; Gunathasan, Krishanthi; Holden, Lars; Holden, Marit; Liestøl, Knut; Nygård, Ståle; Nygaard, Vegard; Paulsen, Jonas; Rydbeck, Halfdan; Trengereid, Kai; Clancy, Trevor; Drabløs, Finn; Ferkingstad, Egil; Kalaš, Matúš; Lien, Tonje Gulbrandsen; Rye, Morten Beck; Frigessi, Arnoldo & Hovig, Johannes Eivind (2013). The Genomic HyperBrowser: an analysis web server for genome-scale data. Nucleic Acids Research.  ISSN 0305-1048.  41(W1), s W133- W141 . doi: 10.1093/nar/gkt342 Full text in Research Archive. Show summary
  • Clancy, Trevor; Rødland, Einar Andreas; Nygård, Ståle & Hovig, Johannes Eivind (2013). Predicting Physical Interactions between Protein Complexes. Molecular & Cellular Proteomics.  ISSN 1535-9476.  12(6), s 1723- 1734 . doi: 10.1074/mcp.O112.019828
  • Murrell, Wayne; Palmero, Emily Herrera; Bianco, John; Stangeland, Biljana; Joel, Mrinal; Paulson, Linda Marie; Thiede, Bernd; Grieg, Zanina Zilic; Ramsnes, Ingunn; Skjellegrind, Håvard Kjesbu; Nygård, Ståle; Brandal, Petter; Sandberg, Cecilie; Vik-Mo, Einar O.; Palmero, Sheryl & Langmoen, Iver Arne (2013). Expansion of Multipotent Stem Cells from the Adult Human Brain. PLoS ONE.  ISSN 1932-6203.  8(8) . doi: 10.1371/journal.pone.0071334
  • Pietrzyk, Jacek Jozef; Kwinta, Przemko; Bik-Multanowski, Miroslaw; Madetko-Talowska, Anna; Jagla, Mateusz; Tomasik, Tomasz; Mitkowska, Zofia; Wollen, Embjørg Julianne; Nygård, Ståle & Saugstad, Ola Didrik (2013). New insight into the pathogenesis of retinopathy of prematurity: assessment of whole-genome expression. Pediatric Research.  ISSN 0031-3998.  73(4), s 476- 483 . doi: 10.1038/pr.2012.195
  • Skrbic, Biljana; BJØRNSTAD, JOHANNES; Marstein, Henriette; Carlson, Cathrine Rein; Sjaastad, Ivar; Nygård, Ståle; Bjørnstad, Sigrid; Christensen, Geir Arve & Tønnessen, Theis (2013). Differential regulation of extracellular matrix constituents in myocardial remodeling with and without heart failure following pressure overload. Matrix Biology.  ISSN 0945-053X.  32(2), s 133- 142 . doi: 10.1016/j.matbio.2012.11.011
  • Vistnes, Reidun Maria; Høiseth, Arne Didrik; Røsjø, Helge; Nygård, Ståle; Pettersen, Eirik; Søyseth, Vidar; Hurlen, Petter; Christensen, Geir Arve & Omland, Torbjørn (2013). Lack of pro-inflammatory cytokine mobilization predicts poor prognosis in patients with acute heart failure. Cytokine.  ISSN 1043-4666.  61(3), s 962- 969 . doi: 10.1016/j.cyto.2013.01.006
  • Wollen, Embjørg Julianne; Sejersted, Yngve; Wright, Marianne; Bik-Multanowski, Miroslaw; Madetko-Talowska, Anna; Günther, Clara-Cecilie; Nygård, Ståle; Kwinta, Przemko; Pietrzyk, Jacek Jozef & Saugstad, Ola Didrik (2013). Transcriptome profiling of the newborn mouse lung after hypoxia and reoxygenation: hyperoxic reoxygenation affects mTOR signaling pathway, DNA repair, and JNK-pathway regulation. Pediatric Research.  ISSN 0031-3998.  74(5), s 536- 544 . doi: 10.1038/pr.2013.140 Show summary
  • Lindholm, Evita Maria; Kristian, Alexandr; Nalwoga, Hawa; Kruger, Kristi; Nygård, Ståle; Akslen, Lars A.; Mælandsmo, Gunhild & Engebråten, Olav (2012). Effect of antiangiogenic therapy on tumor growth, vasculature and kinase activity in basal- and luminal-like breast cancer xenografts. Molecular Oncology.  ISSN 1574-7891.  6(4), s 418- 427 . doi: 10.1016/j.molonc.2012.03.006
  • Rutkovskiy, Arkady; Mariero, Lars Henrik; Nygård, Ståle; Stensløkken, Kåre-Olav; Valen, Guro & Vaage, Ingvar Jarle (2012). Transient hyperosmolality modulates expression of cardiac aquaporins. Biochemical and Biophysical Research Communications - BBRC.  ISSN 0006-291X.  425(1), s 70- 75 . doi: 10.1016/j.bbrc.2012.07.052
  • Røsjø, Helge; Nygård, Ståle; Kaukonen, Kirsi-Maija; Karlsson, Sari; Stridsberg, Mats; Ruokonen, Esko; Pettilä, Ville & Omland, Torbjørn (2012). Prognostic value of chromogranin A in severe sepsis: data from the FINNSEPSIS study. Intensive Care Medicine.  ISSN 0342-4642.  38(5), s 820- 829 . doi: 10.1007/s00134-012-2546-8
  • Røsjø, Helge; Tamm, Natalia N.; Kravdal, Gunnhild; Seferian, Karina R.; Høiseth, Arne Didrik; Nygård, Ståle; Badr, Pirouz; Røysland, Ragnhild & Omland, Torbjørn (2012). Diagnostic utility of a single-epitope sandwich B-type natriuretic peptide assay in stable coronary artery disease: Data from the Akershus Cardiac Examination (ACE) 1 Study. Clinical Biochemistry.  ISSN 0009-9120.  45(16-17), s 1269- 1275 . doi: 10.1016/j.clinbiochem.2012.05.010
  • Røysland, Ragnhild; Kravdal, Gunnhild; Høiseth, Arne Didrik; Nygård, Ståle; Pirouz, Badr; Hagve, Tor-Arne; Omland, Torbjørn & Røsjø, Helge (2012). Cardiac troponin T levels and exercise stress testing in patients with suspected coronary artery disease: the Akershus Cardiac Examination (ACE) 1 study. Clinical Science.  ISSN 0143-5221.  122(11-12), s 599- 606 . doi: 10.1042/CS20110557
  • Wæhre, Anne; Vistnes, Reidun Maria; Sjaastad, Ivar; Nygård, Ståle; Husberg, Cathrine; Lunde, Ida Gjervold; Aukrust, Pål; Yndestad, Arne; Vinge, Leif Erik; Behmen, Dina; Neukamm, Ernst Christian; Brun, Henrik; Thaulow, Erik & Christensen, Geir Arve (2012). Chemokines regulate small leucine-rich proteoglycans in the extracellular matrix of the pressure-overloaded right ventricle. Journal of applied physiology.  ISSN 8750-7587.  112(8), s 1372- 1382 . doi: 10.1152/japplphysiol.01350.2011
  • BJØRNSTAD, JOHANNES; Sjaastad, Ivar; Nygård, Ståle; Hasic, Almira; Ahmed, Muhammad Shakil; Attramadal, Håvard; Finsen, Alexandra; Christensen, Geir Arve & Tønnessen, Theis (2011). Collagen isoform shift during the early phase of reverse left ventricular remodelling after relief of pressure overload. European Heart Journal.  ISSN 0195-668X.  32(2), s 236- 245 . doi: 10.1093/eurheartj/ehq166
  • Finsen, Alexandra; Lunde, Ida Gjervold; Sjaastad, Ivar; Østli, Even; Lyngra, Marianne; Jarstadmarken, Hilde; Hasic, Almira; Nygård, Ståle; Wilcox-Adelman, Sarah A; Goetinck, Paul F; Lyberg, Torstein; Skrbic, Biljana; Florholmen, Geir; Tønnessen, Theis; Louch, William Edward; Djurovic, Srdjan; Carlson, Cathrine Rein & Christensen, Geir Arve (2011). Syndecan-4 is essential for development of concentric myocardial hypertrophy via stretch-induced activation of the calcineurin-NFAT pathway. PLoS ONE.  ISSN 1932-6203.  6(12) . doi: 10.1371/journal.pone.0028302 Full text in Research Archive.
  • Sandve, Geir Kjetil Ferkingstad; Ferkingstad, Egil & Nygård, Ståle (2011). Sequential Monte Carlo multiple testing. Bioinformatics.  ISSN 1367-4803.  27(23), s 3235- 3241 . doi: 10.1093/bioinformatics/btr568
  • Wæhre, Anne; Halvorsen, Bente; Yndestad, Arne; Husberg, Cathrine; Sjaastad, Ivar; Nygård, Ståle; Dahl, Christen Peder; Ahmed, Muhammad Shakil; Finsen, Alexandra; Reims, Henrik Mikael; Louch, William Edward; Hilfiker-Kleiner, Denise; Vinge, Leif Erik; Roald, Borghild; Attramadal, Håvard; Lipp, Martin; Gullestad, Lars; Aukrust, Pål & Christensen, Geir Arve (2011). Lack of Chemokine Signaling through CXCR5 Causes Increased Mortality, Ventricular Dilatation and Deranged Matrix during Cardiac Pressure Overload. PLoS ONE.  ISSN 1932-6203.  6(4), s e18668 . doi: 10.1371/journal.pone.0018668
  • Hougen, Karina; Aronsen, Jan Magnus; Stokke, Mathis Korseberg; Enger, Ulla Helene; Nygård, Ståle; Andersson, Kristin Brevik; Christensen, Geir Arve; Sejersted, Ole M & Sjaastad, Ivar (2010). Cre-loxP DNA recombination is possible with only minimal unspecific transcriptional changes and without cardiomyopathy in Tg(alpha MHC-MerCreMer) mice. American Journal of Physiology. Heart and Circulatory Physiology.  ISSN 0363-6135.  299(5), s H1671- H1678 . doi: 10.1152/ajpheart.01155.2009
  • Vistnes, Reidun Maria; Wæhre, Anne; Nygård, Ståle; Sjaastad, Ivar; Andersson, Kristin Brevik; Husberg, Cathrine & Christensen, Geir Arve (2010). Circulating cytokine levels in mice with heart failure are etiology dependent. Journal of applied physiology.  ISSN 8750-7587.  108(5), s 1357- 1364 . doi: 10.1152/japplphysiol.01084.2009
  • Bøvelstad, Hege; Nygård, Ståle & Borgan, Ørnulf (2009). Survival prediction from clinico-genomic models - a comparative study. BMC Bioinformatics.  ISSN 1471-2105.  10 . doi: 10.1186/1471-2105-10-413 Show summary
  • Madsen, Lene; Lund, Terje; Grieg, Zanina Zilic; Nygård, Ståle; Holmvang, Lene; Jurlander, Birgit; Grande, Peer; Christensen, Geir Arve & Atar, Dan (2009). Cardiac troponin I degradation in serum of patients with hypertrophic obstructive cardiomyopathy undergoing percutaneous septal ablation. Cardiology.  ISSN 0008-6312.  114, s 167- 173 . doi: 10.1159/000226596
  • Nakken, Ester; Nygård, Ståle; Haaland, Therese Kristina; Berge, K.E.; Ødegaard, Annlaug; Labori, Knut Jørgen & Ræder, Morten (2009). Gene expression profiles reflect sclerosing cholangitis activity in abcb4 (-/ -) mice. Scandinavian Journal of Gastroenterology.  ISSN 0036-5521.  44(2), s 211- 218 . doi: 10.1080/00365520802400867
  • Husberg, Cathrine; Nygård, Ståle; Finsen, Alexandra; Damås, Jan Kristian; Frigessi, Arnoldo; Øie, Erik; Wæhre, Anne; Gullestad, Lars; Aukrust, Pål; Yndestad, Arne & Christensen, Geir Arve (2008). Cytokine expression profiling of the myocardium reveals a role for CX3CL1 (fractalkine) in heart failure. Journal of Molecular and Cellular Cardiology.  ISSN 0022-2828.  45, s 261- 269 . doi: 10.1016/j.yjmcc.2008.05.009
  • Nygård, Ståle; Borgan, Ørnulf; Lingjærde, Ole Christian & Størvold, Hege Leite (2008). Partial least squares Cox regression for genome-wide data. Lifetime Data Analysis.  ISSN 1380-7870.  14, s 179- 195 . doi: 10.1007/s10985-007-9076-7
  • Bøvelstad, Hege; Nygård, Ståle; Størvold, Hege Leite; Aldrin, Magne; Borgan, Ørnulf; Frigessi, Arnoldo & Lingjærde, Ole Christian (2007). Predicting survival from microarray data - a comparative study. Bioinformatics.  ISSN 1367-4803.  23, s 2080- 2087 . doi: 10.1093/bioinformatics/btm305
  • Husberg, Cathrine; Nygård, Ståle; Finsen, Alexandra Vanessa; Damås, Jan Kristian; Frigessi, Arnoldo; Øie, Erik; Gullestad, Lars; Aukrust, Pål; Yndestad, Arne & Christensen, Geir (2007). Cytokine expression profiling of the myocardium reveals a role for CX3CL1 (fractalkine) in heart failure. Journal of Molecular and Cellular Cardiology.  ISSN 0022-2828.  42( 6), s 152- 153

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  • Braadland, PR; Giskeødegård, Guro F.; Sandsmark, Elise; Bertilsson, Helena; Wood, Leslie Euceda; Hansen, Ailin Falkmo; Grytli, Helene Hartvedt; Katz, Betina; Svindland, Aud; Berge, Viktor; Eri, LM; Nygård, Ståle; Bathen, Tone Frost; Tasken, Kristin Austlid & Tessem, May-Britt (2016). Distinguishing indolent from agressive prostate cancer by ex vivo metabolic fingerprinting.
  • Mohammadzadeh, Naiyereh; Engebretsen, Kristin V Thunheim; Lunde, Ida Gjervold; Sjaastad, Ivar; Strand, Mari Elen; Marstein, Henriette; Aronsen, Jan Magnus; Nygård, Ståle; Skrbic, Biljana; Bandlien, Caroline; Andenæs, Kine; Chakravarti, Shukti; Christensen, Geir Arve & Tønnessen, Theis (2016). Lack of the extracellular matrix proteoglycan lumican leads to cardiac dysfunction in response to pressure overload.
  • Mohammadzadeh, Naiyereh; Engebretsen, Kristin; Lunde, Ida Gjervold; Sjaastad, Ivar; Strand, Mari Elen; Marstein, Henriette; Aronsen, Jan Magnus; Nygård, Ståle; Skrbic, Biljana; Bandlien, Caroline; Andenæs, Kine; Chakravarti, Shukti; Christensen, Geir Arve & Tønnessen, Theis (2016). Lack of the extracellular matrix proteoglycan lumican leads to ventricular dilatation, attenuated hypertrophy and contractile dysfunction in response to pressure overload.
  • Carlson, Cathrine Rein; Nygård, Ståle; Sirnes, Solveig; Jarstadmarken, Hilde; Martinsen, Marita; Lunde, Marianne; Tutturen, Astrid Elisabeth Voorham; De Souza, Gustavo Antonio & Christensen, Geir Arve (2015). A protein-protein interaction (PPI) map of cardiac syndecan-4.
  • Drabløs, Finn; Nygård, Ståle; Hovig, Johannes Eivind; Våge, Dag Inge; Willassen, Nils Peder; Petersen, Kjell & Jonassen, Inge (2014). ELIXIR - An infrastructure for bioinformatics.
  • Lipsett, David Bruce; Frisk, Michael; Hodne, Kjetil; Singh, Neha; Nygård, Ståle; Aronsen, Jan Magnus; Sejersted, Ole M; Sjaastad, Ivar; Wasserstrom, Andrew J.; Christensen, Geir Arve & Louch, William Edward (2014). B1N1 controls longitudinal T-tubule growth in cardiomyocytes during development and disease.
  • Nygård, Ståle & Jonassen, Inge (2014). The Norwegian Bioionformatics Platform. NBS-nytt.  ISSN 0801-3535.  (2), s 32- 35
  • Ottesen, Anett Hellebø; Louch, William Edward; Carlson, Cathrine Rein; Landsverk, Ole J. B.; Kurola, Jouni; Johansen, Rune Forstrøm; Moe, Morten Kaare; Aronsen, Jan Magnus; Høiseth, Arne Didrik; Jarstadmarken, Hilde; Nygård, Ståle; Bjørås, Magnar; Sjaastad, Ivar; Pettilä, Ville; Stridsberg, Mats; Omland, Torbjørn; Christensen, Geir Arve & Røsjø, Helge (2014). Secretoneurin provides independent prognostic information in patients with heart failure and cardiac arrest, and has a direct inhibitory effect on diastolic Ca2+ leak and arrhythmogenic Ca2+ waves via CaMKII inhibition. Circulation Research.  ISSN 0009-7330.  115
  • Ottesen, Anett Hellebø; Louch, William Edward; Carlson, Cathrine Rein; Landsverk, Ole J. B.; Johansen, Rune forstrom; Moe, Morten; Høiseth, Arne Didrik; Jarstadmarken, Hilde o.; Nygård, Ståle; Bjørås, Magnar; Stridsberg, Mats; Omland, Torbjørn; Christensen, Geir Arve & Røsjø, Helge (2013). Secretoneurin is a novel endogenous CaMKII inhibitor that regulates cardiomyocyte calcium handling and is closely associated with mortality in patients with acute heart failure. Circulation.  ISSN 0009-7322.  128
  • Brynildsen, Jon; Høiseth, Arne Didrik; Nygård, Ståle; Hagve, Tor-Arne; Christensen, Geir Arve; Omland, Torbjørn & Røsjø, Helge (2013). Suboptimal accuracy of the ED physician and NT-proBNP levels to diagnose heart failure in elderly patients with dyspnoea: the Akershus Cardiac Examination (ACE) 2 Study. European Heart Journal.  ISSN 0195-668X.  34, s 132- 132
  • Lærdahl, Jon Kristen; Nygård, Ståle; Jonassen, Inge; Hovig, Johannes Eivind; Petersen, Kjell; Drabløs, Finn; Willassen, Nils Peder & Våge, Dag Inge (2013). The national technology platform for bioinformatics.
  • Ottesen, Anett Hellebø; Louch, William Edward; Carlson, Cathrine Rein; Landsverk, Ole J. B.; Johansen, Rune forstrom; Moe, Morten Carsten; Høiseth, Arne Didrik; Jarstadmarken, Hilde o.; Nygård, Ståle; Bjørås, Magnar; Stridsberg, Mats; Omland, Torbjørn; Christensen, Geir Arve & Røsjø, Helge (2013). Secretoneurin regulates cardiomyocyte calcium homeostasis via CaMKIIinhibition and is a potent marker of mortality in patients with acute heart failure.
  • Ottesen, Anett Hellebø; Louch, William Edward; Carlson, Cathrine Rein; Landsverk, Ole J. B.; Johansen, Rune Forstrom; Moe, Morten; Høiseth, Arne Didrik; Jarstadmarken, Hilde; Nygård, Ståle; Bjørås, Magnar; Stridsberg, Mats; Omland, Torbjørn; Christensen, Geir Arve & Røsjø, Helge (2013). 32. Secretoneurin is a novel endogenous CaMKII inhibitor that regulates cardiomyocyte calcium handling and is closely associated with mortality in patients with acute heart failure.
  • Hillestad, Vigdis; Larsen, Karl Otto; Sjaastad, Ivar; Nygård, Ståle; Skjønsberg, Ole Henning & Christensen, Geir Arve (2011). Neutralization of circulating interleukin-18 reduces diastolic dysfunction.
  • Husberg, Cathrine; Agnetti, Giulio; Nygård, Ståle; Andersson, Kristin Brevik; Christensen, Geir Arve & Van Eyk, Jennifer (2011). Disruption of Ca2+ homeostasis induces activation of heat shock proteins and a shift in cytoskeleton composition.
  • Lau, Corinna; Nygård, Ståle; Fure, Hilde; Lappegård, Knut Tore; Brekke, Ole Lars; Hovig, Eivind & Mollnes, Tom Eirik (2011). Challenging pattern recognition cross-talk: A gene profiling perspective of human Gram-negative bacteriaemia. Molecular Immunology.  ISSN 0161-5890.  48(14), s 1691- 1691 . doi: 10.1016/j.molimm.2011.06.297
  • Lunde, Ida Gjervold; Florholmen, Geir; Finsen, Alexandra; Skrbic, Biljana; Kvaløy, Heidi; Austbø, Bjørg; Jarstadmarken, Hilde; Hasic, Almira; Nygård, Ståle; Sjaastad, Ivar; Tønnessen, Theis; Wilcox-Adelman, Sarah; Carlson, Cathrine Rein & Christensen, Geir Arve (2011). The Z-disc proteoglycan syndecan-4 regulates mechanical stress-induced calcineurin-NFAT signalling in cardiomyocytes.
  • Nygård, Ståle; Reitan, Trond; Clancy, Trevor; Nygaard, Vegard; BJØRNSTAD, JOHANNES; Tønnessen, Theis; Christensen, Geir Arve & Hovig, Eivind (2011). Identifying pathogenic signaling and regulatory networks by integrating microarray data with prior knowledge.
  • Nygård, Ståle; Reitan, Trond; Clancy, Trevor; Nygaard, Vegard; BJØRNSTAD, JOHANNES; Tønnessen, Theis; Christensen, Geir Arve & Hovig, Eivind (2011). Identifying pathogenic signaling and regulatory networks by integrating microarray data with prior knowledge.
  • Skrbic, Biljana; BJØRNSTAD, JOHANNES; Marstein, Henriette; Sjaastad, Ivar; Nygård, Ståle; Christensen, Geir Arve & Tønnessen, Theis (2011). Reduction in collagen type 8 might be involved in transition from compensated hypertrophy to left ventricular dilatation and overt heart failure in pressure overload.
  • Skrbic, Biljana; BJØRNSTAD, JOHANNES; Marstein, Henriette; Sjaastad, Ivar; Nygård, Ståle; Christensen, Geir Arve & Tønnessen, Theis (2011). Reduksjon i kollagen VIII kan være involvert i venstre ventrikkel dilatasjon og overgang fra kompensert hypertrofi til dekompensert hjertesvikt ved trykkoverbelastning.
  • Wæhre, Anne; Vistnes, Reidun Maria; Sjaastad, Ivar; Nygård, Ståle; Husberg, Cathrine; Lunde, Ida Gjervold; Behmen, Dina; Neukamm, Christian; Brun, H; Thaulow, E & Christensen, Geir Arve (2011). Chemokines regulate small leucine-rich proteins in the extracellular matrix of the pressure overload right ventricle.
  • BJØRNSTAD, JOHANNES; Sjaastad, Ivar; Nygård, Ståle; Finsen, Alexandra; Hasic, Almira & Christensen, Geir Arve (2010). The pro-inflammatory adipocytokine visfatin might play a role regulating cardiac metabolism in human and experimental aortic stenosis. European Journal of Heart Failure. Supplements.  ISSN 1567-4215.  9, s S220- S220
  • Drabløs, Finn; Petersen, Kjell; Johansen, Jostein; Nygård, Ståle; Ahmad, Rafi; Smalås, Arne; Hovig, Eivind & Jonassen, Inge (2010). The FUGE Bioinformatics platform: a central platform in the FUGE2 period. MITAT. Minimally invasive therapy & allied technologies.  ISSN 1364-5706.  19, s 70- 71 . doi: 10.3109/13645706.2010.500867
  • Drabløs, Finn; Petersen, Kjell; Johansen, Jostein; Nygård, Ståle; Ahmad, Rafi; Smalås, Arne; Hovig, Eivind & Jonassen, Inge (2010). The FUGE Bioinformatics platform: a central platform in the FUGE2 period.
  • Hillestad, Vigdis; Larsen, Karl-Otto; Sjaastad, Ivar; Nygård, Ståle; Skjønsberg, Ole Henning & Christensen, Geir Arve (2010). Effects of IL-ı8 neutralization in alveolar hypoxia.
  • Hougen, Karina; Aronsen, Jan Magnus; Stokke, Mathis Korseberg; Enger, Ulla Helene; Nygård, Ståle; Andersson, Kristin Brevik; Christensen, Geir Arve; Sejersted, Ole M & Sjaastad, Ivar (2010). Single dose tamoxifen for Cre-lox gene inactivation minimizes unspecific transcriptional changes and cardiomyopathy in mice.
  • Nygård, Ståle; Nygaard, Vigdis; Clancy, Trevor; BJØRNSTAD, JOHANNES; Skrbic, Biljana; Sjaastad, Ivar; Tønnessen, Theis; Christensen, Geir Arve & Hovig, E (2010). Integrating microarray gene expression data with prior knowledge about molecular interactions for identification of important heart failure pathways.
  • Nygård, Ståle; Nygaard, Vigdis; Clancy, Trevor; BJØRNSTAD, JOHANNES; Skrbic, Biljana; Tønnessen, Theis; Christensen, Geir Arve & Hovig, Eivind (2010). Integrating microarray gene expression data with prior knowledge about molecular interactions for identification of important heart failure pathways.
  • Skrbic, Biljana; BJØRNSTAD, JOHANNES; Marstein, Henriette; Sjaastad, Ivar; Nygård, Ståle; Christensen, Geir Arve & Tønnessen, Theis (2010). Reduction in collagen VIII might be involved in transition from compensated hypertrophy to overt heart failure in pressure overload.
  • Vistnes, Reidun Maria; Wæhre, Anne; Sjaastad, Ivar; Nygård, Ståle; Husberg, Cathrine & Christensen, Geir Arve (2010). Circulating cytokines in heart failure.
  • BJØRNSTAD, JOHANNES; Sjaastad, Ivar; Nygård, Ståle; Finsen, Alexandra; Hasic, Almira; Attramadal, Håvard; Ahmed, Muhammad Shakil; Christensen, Geir Arve & Tønnessen, Theis (2009). Reverse remodeling of the left ventricle during the early phase after relief of pressure overload in a mouse model. Hjerteforum.  ISSN 0802-1465.  22, s 110- 110
  • BJØRNSTAD, JOHANNES; Sjaastad, Ivar; Nygård, Ståle; Hasic, Almira; Ahmed, Muhammad Shakil; Attramadal, Håvard; Finsen, Alexandra; Christensen, Geir Arve & Tønnessen, Theis (2009). Reverse remodeling of the left ventricle during the early phase after relief of pressure overload in a mouse model. European Heart Journal, Supplement.  ISSN 1520-765X.  30, s 218- 218
  • Halvorsen, Bente; Yndestad, Arne; Husberg, Cathrine; Sjaastad, Ivar; Nygård, Ståle; Louch, William Edward; Reims, HM; Roald, B; Dahl, Christen Peder; Finsen, Alexandra; Ahmed, Muhammad Shakil; Attramadal, Håvard; Hilfiker-Kleiner, D; Lipp, M.; Aukrust, Pål & Christensen, Geir Arve (2009). The homeostatic chemokine CXCL13 and its receptor CXCR5 are regulated in heart failure and are involved in cardiac remodelling.
  • Hillestad, Vigdis; Larsen, Karl-Otto; Sjaastad, Ivar; Nygård, Ståle; Skjønsberg, Ole Henning & Christensen, Geir Arve (2009). IL-18BP; a potential therapeutic agent in right ventricular hypertrophy.
  • Husberg, Cathrine; Agnetti, Giulio; Nygård, Ståle; Andersson, Kristin Brevik; Christensen, Geir Arve & van Eyk, Jennifer E. (2009). Activation of Heat Shock Proteins and Shifts in Cytoskeleton Composition in a Cardiac-specific SERCA2 KO Mouse. Circulation.  ISSN 0009-7322.  120(18), s S717- S717
  • Lunde, Ida Gjervold; Finsen, Alexandra; Østli, EK; Lyngra, Marianne; Sjaastad, Ivar; Jarstadmarken, Hilde; Karahasan, Almira; Nygård, Ståle; Wilcox-Adelman, Sarah; Goetinck, Paul; Lyberg, Torstein; Tønnessen, Theis; Djurovic, Srdjan; Carlson, Cathrine Rein & Christensen, Geir Arve (2009). Phosphorylation of syndecan-4 regulates myocardial hypertrophy through the calcineurin-NFAT signalling pathway.
  • Vistnes, Maria; Wæhre, Anne; Sjaastad, Ivar; Nygård, Ståle; Andersson, Kristin Brevik; Husberg, Cathrine & Christensen, Geir Arve (2009). Circulating cytokine levels heart failure are etiology-dependent. Hjerteforum.  ISSN 0802-1465.  22, s 113- 113
  • Wæhre, Anne; Halvorsen, Bente; Yndestad, Arne; Husberg, Cathrine; Sjaastad, Ivar; Nygård, Ståle; Louch, William Edward; Reims, HM; Roald, Borghild; Dahl, Christen Peder; Finsen, Alexandra; Ahmed, Muhammad Shakil; Attramadal, Håvard; Hilfiker-Kleiner, D; Lipp, M.; Gullestad, Lars; Aukrust, Pål & Christensen, Geir Arve (2009). The homeostatic chemokine CXCL13 and its receptor CXCR5 are regulated in heart failure and are involved in cardiac remodelling.
  • Wæhre, Anne; Halvorsen, Bente; Yndestad, Arne; Husberg, Cathrine; Sjaastad, Ivar; Nygård, Ståle; Louch, William Edward; Reims, HM; Roald, Borghild; Dahl, Christen Peder; Finsen, Alexandra; Ahmed, Muhammad Shakil; Attramadal, Håvard; Hilfiker-Kleiner, D; Lipp, M; Gullestad, Lars; Aukrust, Pål & Christensen, Geir Arve (2009). The homeostatic chemokine cxc113 and its receptor cxcr5 are regulated in heart failure and are involved in cardiac remodeling. Circulation.  ISSN 0009-7322.  120, s S801- S801
  • BJØRNSTAD, JOHANNES; Sjaastad, Ivar; Finsen, Alexandra; Nygård, Ståle; Hasic, Almira & Christensen, Geir Arve (2008). Reversible pressure overload alters expression of actin binding and extracellular matrix genes.
  • Husberg, Cathrine; Nygård, Ståle; Finsen, Alexandra; Damås, JK; Frigessi, A.; Øie, EH; Gullestad, Lars; Wæhre, Anne; Andersson, Kristin Brevik; Aukrust, Pål; Yndestad, Arne & Christensen, Geir Arve (2008). Enhanced CX3CL1 (fractalkine) production in the failing myocardium may promote myocardial remodeling and dysfunction.
  • Madsen, LH; Lund, Terje; Grieg, Zanina Zilic; Nygård, Ståle; Holmvang, L; Jurlander, B; Grande, P; Christensen, Geir Arve & Atar, Dan (2008). Immunoblot analysis of cardiac troponin I in patients with hypertrophic obstructive cardiomyopathy undergoing percutaneous septal ablation.
  • Vistnes, Maria; Wæhre, Anne; Sjaastad, Ivar; Nygård, Ståle; Andersson, Kristin Brevik; Husberg, Cathrine & Christensen, Geir Arve (2008). Cytokine profiles in the circulation of mice with heart failure are etiology-dependent.
  • Vistnes, Maria; Wæhre, Anne; Sjaastad, Ivar; Nygård, Ståle; Andersson, Kristin Brevik; Husberg, Cathrine & Christensen, Geir Arve (2008). Cytokine profiles in the circulation of mice with heart failure are etiology-dependent.
  • Husberg, Cathrine; Finsen, Alexandra; Nygård, Ståle & Christensen, Geir Arve (2007). Differential regulation of genes encoding contractile proteins during development of heart failure after myocardial infarction in mice.
  • Husberg, Cathrine; Finsen, Alexandra; Nygård, Ståle & Christensen, Geir Arve (2007). Differential regulation of genes encoding contractile proteins during development of heart failure after myocardial infarction in mice.

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Published Jan. 16, 2013 12:05 AM - Last modified Mar. 8, 2015 8:36 PM