Our latest publications - BMI

  • Landin, Maria Augusta Dos S Silva; Mariussen, Espen; Nygård, Ståle; Berger, Urs & Osmundsen, Harald (2017). Effects of HBCD on hepatic gene expression of wilde-type and PPAR-a -/- mice.. Frontiers in Genetics.  ISSN 1664-8021.
  • Myhre, Peder Langeland; Stridsberg, Mats; Linko, Rita; Okkonen, Marjatta; Nygård, Ståle; Christensen, Geir Arve; Pettilä, Ville; Omland, Torbjørn & Røsjø, Helge (2017). Circulating chromogranin B levels in patients with acute respiratory failure: data from the FINNALI Study. Biomarkers.  ISSN 1354-750X.  22(8), s 775- 781 . doi: 10.1080/1354750X.2016.1269200
  • Winther, Jacob Andreas; Brynildsen, Jon; Høiseth, Arne Didrik; Strand, Heidi; Følling, Ivar; Christensen, Geir Arve; Nygård, Ståle; Røsjø, Helge & Omland, Torbjørn (2017). Prognostic and diagnostic significance of copeptin in acute exacerbation of chronic obstructive pulmonary disease and acute heart failure: Data from the ACE 2 study. Respiratory Research.  ISSN 1465-993X.  18(1) . doi: 10.1186/s12931-017-0665-z
  • Josefsson, Sarah Elisabet Göthberg; Huse, Kanutte; Kolstad, Arne; Beiske, Klaus; Pende, Daniela; Steen, Chloe Beate; Inderberg, Else Marit; Lingjærde, Ole Christian; Østenstad, Bjørn; Smeland, Erlend B; Levy, Ronald; Irish, Jonathan M. & Myklebust, June (2017). T cells expressing checkpoint receptor TIGIT are enriched in follicular lymphoma tumors and characterized by reversible suppression of T-cell receptor signaling. Clinical Cancer Research.  ISSN 1078-0432. . doi: 10.1158/1078-0432.CCR-17-2337
  • Næss, Solveig; Chintaluri, Chaitanya; Ness, Torbjørn Vefferstad; Dale, Anders; Einevoll, Gaute & Wójcik, Daniel K. (2017). Corrected four-sphere head model for eeg signals. Frontiers in Human Neuroscience.  ISSN 1662-5161.  11:490, s 1- 7 . doi: 10.3389/fnhum.2017.00490
  • Seppälä, Toni; Pylvänäinen, Kirsi; Evans, Dafydd Gareth; Järvinen, Heikki; Renkonen-Sinisalo, Laura; Bernstein, Inge; Holinski-Feder, Elke; Sala, Paola; Lindblom, Annika; Macrae, Finlay; Blanco, Ignacio; Sijmons, Rolf; Jeffries, Jacqueline; Vasen, Hans; Burn, John; Nakken, Sigve; Hovig, Eivind; Rødland, Einar Andreas; Tharmaratnam, Kukatharmini; De Vos Tot Nederveen Cappel, Wouter H.; Hill, James; Wijnen, Juul; Jenkins, Mark; Genuardi, Maurizio; Green, Kate; Lalloo, Fiona; Sunde, Lone; Mints, Miriam; Bertario, Lucio; Pineda, Marta; Navarro, Matilde; Morak, Monika; Frayling, Ian M.; Plazzer, John-Paul; Sampson, Julian R.; Capella, Gabriel; Möslein, Gabriela; Mecklin, Jukka-Pekka & Møller, Pål (2017). Colorectal cancer incidence in path_MLH1 carriers subjected to different follow-up protocols: A Prospective Lynch Syndrome Database report. Hereditary Cancer in Clinical Practice.  ISSN 1731-2302.  15:18, s 1- 10 . doi: 10.1186/s13053-017-0078-5
  • Møller, Pål; Seppälä, Toni; Bernstein, Inge; Holinski-Feder, Elke; Sala, Paola; Evans, D. Gareth; Lindblom, Annika; MacRae, Finlay; Blanco, Ignacio; Sijmons, Rolf; Jeffries, Jacqueline; Vasen, Hans; Burn, John; Nakken, Sigve; Hovig, Eivind; Rødland, Einar Andreas; Tharmaratnam, Kukatharmini; De Vos Tot Nederveen Cappel, Wouter H.; Hill, James; Wijnen, Juul; Jenkins, Mark; Green, Kate; Lalloo, Fiona; Sunde, Lone; Mints, Miriam; Bertario, Lucio; Pineda, Marta; Navarro, Matilde; Morak, Monika; Renkonen-Sinisalo, Laura; Frayling, Ian M.; Plazzer, John-Paul; Pylvanainen, Kirsi; Genuardi, Maurizio; Mecklin, Jukka-Pekka; Möslein, Gabriela; Sampson, Julian R. & Capella, Gabriel (2017). Incidence of and survival after subsequent cancers in carriers of pathogenic MMR variants with previous cancer: A report from the prospective Lynch syndrome database. Gut.  ISSN 0017-5749.  66(9), s 1657- 1664 . doi: 10.1136/gutjnl-2016-311403
  • Smebye, Marianne Lislerud; Agostini, Antonio; Johannessen, Bjarne; Thorsen, Jim; Davidson, Ben; Tropé, Claes Gøran; Heim, Sverre; Skotheim, Rolf I. & Micci, Francesca (2017). Involvement of DPP9 in gene fusions in serous ovarian carcinoma. BMC Cancer.  ISSN 1471-2407.  17(1) . doi: 10.1186/s12885-017-3625-6
  • Dragly, Svenn-Arne; Mobarhan, Milad; Solbrå, Andreas Våvang; Tennøe, Simen; Hafreager, Anders; Malthe-Sørenssen, Anders; Fyhn, Marianne; Hafting, Torkel & Einevoll, Gaute (2017). Neuronify: An educational simulator for neural circuits. eNeuro.  ISSN 2373-2822.  4(2:e0022-17.2017), s 1- 13 . doi: 10.1523/ENEURO.0022-17.2017
  • Cheng, Jiqiu; Demeulemeester, Jonas; Wedge, David C.; Vollan, Hans Kristian Moen; Pitt, Jason; Russnes, Hege Elisabeth Giercksky; Pandey, Bina P.; Nilsen, Gro; Nord, Silje; Bignell, Graham R; White, Kevin P.; Børresen-Dale, Anne-Lise; Campbell, Peter J.; Kristensen, Vessela N.; Stratton, Michael R.; Lingjærde, Ole Christian; Moreau, Yves & Van Loo, Peter (2017). Pan-cancer analysis of homozygous deletions in primary tumours uncovers rare tumour suppressors. Nature Communications.  ISSN 2041-1723.  8:1221, s 1- 14 . doi: 10.1038/s41467-017-01355-0
  • Melvær, Giil Lasse; Vedeler, Christian A.; Kristoffersen, Einar Klæboe; Nordrehaug, Jan Erik; Heidecke, Harald; Dechend, Ralf; Schulze-Forster, Kai; Muller, Dominik N.; Von Goetze, Victoria S.; Cabral-Marques, Otavio; Riemekasten, Gabriela; Vogelsang, Petra; Nygård, Ståle; Lund, Anders & Aarsland, Dag (2017). Antibodies to signaling molecules and receptors in Alzheimer's disease are associated with psychomotor slowing, depression, and poor visuospatial function. Journal of Alzheimer's Disease.  ISSN 1387-2877.  59(3), s 929- 939 . doi: 10.3233/JAD-170245
  • de Vries, Elisabeth M.G.; Färkkilä, Martti; Milkiewicz, Piotr; Hov, Johannes Espolin Roksund; Eksteen, Bertus; Thorburn, Douglas; Chazouillères, Olivier; Pares, Albert; Nygård, Ståle; Gilja, Odd Helge; Wunsch, Ewa; Invernizzi, Pietro; Carbone, Marco; Bernuzzi, Francesca; Boberg, Kirsten Muri; Røsjø, Helge; Rosenberg, William; Beuers, Ulrich H.; Ponsioen, Cyriel Y.; Karlsen, Tom Hemming & Vesterhus, Mette (2017). Enhanced liver fibrosis test predicts transplant-free survival in primary sclerosing cholangitis, a multi-centre study. Liver international (Print).  ISSN 1478-3223.  37(10), s 1554- 1561 . doi: 10.1111/liv.13402
  • Khelik, Ksenia; Lagesen, Karin; Sandve, Geir Kjetil; Rognes, Torbjørn & Nederbragt, Alexander Johan (2017). NucDiff: in-depth characterization and annotation of differences between two sets of DNA sequences. BMC Bioinformatics.  ISSN 1471-2105.  18(1) . doi: 10.1186/s12859-017-1748-z
  • Langguth, Johannes; Jarvis, Chad & Cai, Xing (2017). Porting Tissue-Scale Cardiac Simulations to the Knights Landing Platform, In Julian Martin Kunkel; Rio Yokota; Michela Taufer & John Shalf (ed.),  High Performance Computing; ISC High Performance 2017 International Workshops, DRBSD, ExaComm, HCPM, HPC-IODC, IWOPH, IXPUG, P^3MA, VHPC, Visualization at Scale, WOPSSS, Frankfurt, Germany, June 18-22, 2017, Revised Selected Papers.  Springer.  ISBN 978-3-319-67629-6.  28.  s 376 - 388
  • Alsøe, Lene; Sarno, Antonio; Carracedo Huroz, Sergio; Domanska, Diana Ewa; Dingler, Felix; Lirussi, Lisa; Sengupta, Tanima; Tekin, Nuriye Basdag; Jobert, Laure; Alexandrov, Ludmil B.; Galashevskaya, Anastasia; Rada, Cristina; Sandve, Geir Kjetil; Rognes, Torbjørn; Krokan, Hans Einar & Nilsen, Hilde Loge (2017). Uracil Accumulation and Mutagenesis Dominated by Cytosine Deamination in CpG Dinucleotides in Mice Lacking UNG and SMUG. Scientific Reports.  ISSN 2045-2322.  7(1) . doi: 10.1038/s41598-017-07314-5
  • Tveito, Aslak; Jæger, Karoline Horgmo; Kuchta, Miroslav; Mardal, Kent-Andre & Rognes, Marie Elisabeth (2017). A cell-based framework for numerical modeling of electrical conduction in cardiac tissue. Frontiers in Physics.  ISSN 2296-424X. . doi: 10.3389/fphy.2017.00048
  • Mariampillai, Julian Eek; Engeseth, Kristian; Kjeldsen, Sverre Erik; Grundvold, Irene; Liestøl, Knut; Erikssen, Gunnar; Erikssen, Jan Emil; Bodegard, Johan & Skretteberg, Torger (2017). Exercise systolic blood pressure at moderate workload predicts cardiovascular disease and mortality through 35 years of follow-up in healthy, middle-aged men. Blood Pressure.  ISSN 0803-7051.  26(4), s 229- 236 . doi: 10.1080/08037051.2017.1291276
  • Dominguez Valentin, Mev; Nakken, Sigve; Tubeuf, Hélène; Vodak, Daniel; Ekstrøm, Per Olaf; Nissen, Anke M.; Morak, Monika; Holinski-Feder, Elke; Martins, Alexandra; Møller, Pål & Hovig, Eivind (2017). Potentially pathogenic germline CHEK2 c.319+2T>A among multiple early-onset cancer families. Familial Cancer.  ISSN 1389-9600.  Published ahead of print, s 1- 13 . doi: 10.1007/s10689-017-0011-0
  • Zhao, Sen; Løvf, Marthe; Carm, Kristina Totland; Bakken, Anne Cathrine; Hoff, Andreas Midbøe & Skotheim, Rolf I. (2017). Novel transcription-induced fusion RNAs in prostate cancer. OncoTarget.  ISSN 1949-2553.  8(30), s 49133- 49143 . doi: 10.18632/oncotarget.17099
  • Tveito, Aslak; Jæger, Karoline Horgmo; Lines, Glenn Terje; Paszkowski, Lukasz; Sundnes, Joakim; Edwards, Andrew; Mäki-Marttunen, Tuomo; Halnes, Geir & Einevoll, Gaute (2017). An evaluation of the accuracy of classical models for computing the membrane potential and extracellular potential for neurons. Frontiers in Computational Neuroscience.  ISSN 1662-5188.  11 . doi: 10.3389/fncom.2017.00027
  • Larssen, Marte Strømsnes; Steine, Kjetil; Hilde, Janne Mykland; Skjørten, Ingunn; Hodnesdal, Christian; Liestøl, Knut & Gjesdal, Knut (2017). Mechanisms of ECG signs in chronic obstructive pulmonary disease.. Open heart.  ISSN 2053-3624.  4(1) . doi: 10.1136/openhrt-2016-000552
  • Noack, Marcus Michael & Funke, Simon Wolfgang (2017). Hybrid genetic deflated Newton method for global optimisation. Journal of Computational and Applied Mathematics.  ISSN 0377-0427.  325, s 97- 112 . doi: 10.1016/j.cam.2017.04.047
  • Strøm, Thea Bismo; Lærdahl, Jon Kristen & Leren, Trond Paul (2017). Mutations affecting the transmembrane domain of the LDL receptor: Impact of charged residues on the membrane insertion. Human Molecular Genetics.  ISSN 0964-6906.  26(9), s 1634- 1642 . doi: 10.1093/hmg/ddx068
  • Søberg, Kristoffer; Moen, Line Victoria; Skålhegg, Bjørn Steen & Lærdahl, Jon Kristen (2017). Evolution of the cAMP-dependent protein kinase (PKA) catalytic subunit isoforms.. PLoS ONE.  ISSN 1932-6203.  12:e0181091(7), s 1- 17 . doi: 10.1371/journal.pone.0181091
  • Vesterhus, Mette; Holm, Anders; Hov, Johannes Espolin Roksund; Nygård, Ståle; Schrumpf, Erik; Melum, Espen; Thorbjørnsen, Liv Wenche; Paulsen, Vemund; Lundin, Knut Erik Aslaksen; Dale, Inge; Gilja, Odd Helge; Zweers, Serge J.; Vatn, Morten H; Schaap, Frank G.; Jansen, Peter L.M.; Ueland, Thor; Røsjø, Helge; Moum, Bjørn; Ponsioen, Cyriel Y.; Boberg, Kirsten Muri; Färkkilä, Martti; Karlsen, Tom Hemming & Lund-Johansen, Fridtjof (2017). Novel serum and bile protein markers predict primary sclerosing cholangitis disease severity and prognosis. Journal of Hepatology.  ISSN 0168-8278.  66(6), s 1214- 1222 . doi: 10.1016/j.jhep.2017.01.019
  • Noack, Marcus Michael & Clark, Stuart (2017). Acoustic wave and eikonal equations in a transformed metric space for various types of anisotropy. Heliyon.  ISSN 2405-8440.  3(3) . doi: 10.1016/j.heliyon.2017.e00260
  • Domanska, Diana Ewa; Vodak, Daniel; Christin, Lund-Andersen; Salvatore, Stefania; Hovig, Eivind & Sandve, Geir Kjetil (2017). The rainfall plot: Its motivation, characteristics and pitfalls. BMC Bioinformatics.  ISSN 1471-2105. . doi: 10.1186/s12859-017-1679-8
  • Roy, Bishnudeo; Neumann, Ralf Stefan; Snir, Omri; Iversen, Rasmus; Sandve, Geir Kjetil; Lundin, Knut Erik Aslaksen & Sollid, Ludvig Magne (2017). High-Throughput Single-Cell Analysis of B Cell Receptor Usage among Autoantigen-Specific Plasma Cells in Celiac Disease. Journal of Immunology.  ISSN 0022-1767.  199((2)), s 782- 791 . doi: 10.4049/jimmunol.1700169
  • Kehlet, Benjamin Dam & Logg, Anders (2017). A posteriori error analysis of round-off errors in the numerical solution of ordinary differential equations. Numerical Algorithms.  ISSN 1017-1398.  76(1), s 191- 210 . doi: 10.1007/s11075-016-0250-4
  • Elgvin, Tore Oldeide; Trier, Cassandra Nicole; Tørresen, Ole Kristian; Hagen, Ingerid; Lien, Sigbjørn; Nederbragt, Alexander Johan; Ravinet, Mark Simon Paul; Jensen, Henrik & Sætre, Glenn-Peter (2017). The genomic mosaicism of hybrid speciation. Science Advances.  ISSN 2375-2548.  3 . doi: 10.1126/sciadv.1602996 Full text in Research Archive.
  • Marshall, Christian R.; Howrigan, Daniel P.; Merico, Daniele; Thiruvahindrapuram, Bhooma; Wu, Wenting; Greer, Douglas S.; Antaki, Danny; Shetty, Aniket; Holmans, Peter A.; Pinto, Dalila; Gujral, Madhusudan; Brandler, William M.; Malhotra, Dheeraj; Wang, Zhouzhi; Fuentes Fajarado, Karin V.; Maile, Michelle S.; Ripke, Stephan; Agartz, Ingrid; Albus, Margot; Alexander, Madeline; Amin, Farooq; Atkins, Joshua; Bacanu, Silviu A.; Belliveau, Richard A.; Bergen, Sarah E.; Bertalan, Marcelo; Bevilacqua, Elizabeth; Bigdeli, Tim B.; Black, Donald W.; Bruggeman, Richard; Buccola, Nancy G.; Buckner, Randy L.; Bulik-Sullivan, Brendan; Byerley, William; Cahn, Wiepke; Cai, Guiqing; Cairns, Murray J.; Campion, Dominique; Cantor, Rita M.; Carr, Vaughan J.; Carrera, Noa; Catts, Stanley V.; Chambert, Kimberly D.; Cheng, Wei; Cloninger, C. Robert; Cohen, David; Cormican, Paul; Craddock, Nick; Crespo-Facorro, Benedicto; Crowley, James J.; Curtis, David; Davidson, Michael; Davis, Kenneth L.; Degenhardt, Franziska; Del Favero, Jurgen; DeLisi, Lynn E.; Dikeos, Dimitris; Dinan, Timothy; Djurovic, Srdjan; Donohoe, Gary; Drapeau, Elodie; Duan, Jubao; Dudbridge, Frank; Eichhammer, Peter; Eriksson, Johan; Escott-Price, Valentina; Essioux, Laurent; Fanous, Ayman H.; Farh, Kai-How; Farrell, Martilias S.; Frank, Josef; Franke, Lude; Freedman, Robert; Freimer, Nelson B.; Friedman, Joseph I.; Forstner, Andreas J.; Fromer, Menachem; Genovese, Giulio; Georgieva, Lyudmila; Gershon, Elliot S.; Giegling, Ina; Giusti-Rodriguez, Paola; Godard, Stephanie; Goldstein, Jacqueline I.; Gratten, Jacob; De Haan, Lieuwe; Hamshere, Marian L.; Hansen, Mark; Hansen, Thomas; Haroutunian, Vahram; Hartmann, Annette M.; Henskens, Frans A.; Herms, Stefan; Hirschhorn, Joel N.; Hoffmann, Per; Hofman, Andrea; Huang, Hailiang; Ikeda, Masashi; Joa, Inge; Kähler, Anna Katarina; Kahn, René S.; Kalaydjieva, Luba; Karjalainen, Juha; Kavanagh, David; Keller, Matthew C.; Kelly, Brian J.; Kennedy, James L.; Kim, Yunjung; Knowles, James A.; Konte, Bettina; Laurent, Claudine; Lee, Phil; Lee, S. Hong; Legge, Sophie E.; Lerer, Bernard; Levy, Deborah L.; Liang, Kung-Yee; Lieberman, Jeffrey; Lonnqvist, Jouko; Loughland, Carmel M.; Magnusson, Patrik K.E.; Maher, Brion S.; Maier, Wolfgang; Mallet, Jacques; Mattheisen, Manuel; Mattingsdal, Morten; McCarley, Robert W.; McDonald, Colm; McIntosh, Andrew M.; Meier, Sandra; Meijer, Carin J.; Melle, Ingrid; Mesholam-Gately, Raquelle I.; Metspalu, Andres; Michie, Patricia T.; Milani, Lili; Milanova, Vihra; Mokrab, Younes; Morris, Derek W.; Muller-Myhsok, Bertram; Murphy, Kieran C.; Murray, Robin M.; Myin-Germeys, Inez; Nenadic, Igor; Nertney, Deborah A.; Nestadt, Gerald; Nicodemus, Kristin K.; Nisenbaum, Laura; Nordin, Annelie; O'Callaghan, Eadbhard; O'Dushlaine, Colm; Oh, Sang-Yun; Olincy, Ann; Olsen, Line; O'Neill, F. Anthony; Van Os, Jim; Pantelis, Christos; Papadimitriou, George N.; Parkhomenko, Elena; Pato, Michele T.; Paunio, Tiina; Perkins, Diana O.; Pers, Tune H.; Pietilainen, Olli; Pimm, Jonathan; Pocklington, Andrew J.; Powell, John; Price, Alkes; Pulver, Ann E.; Purcell, Shaun M.; Quested, Digby; Rasmussen, Henrik B.; Reichenberg, Abraham; Reimers, Mark A.; Richards, Alexander L.; Roffman, Joshua L.; Roussos, Panos; Ruderfer, Douglas M.; Salomaa, Veikko; Sanders, Alan R.; Savitz, Adam; Schall, Ulrich; Schulze, Thomas G.; Schwab, Sibylle G.; Scolnick, Edward M.; Scott, Rodney J.; Seidman, Larry J.; Shi, Jianxin; Silverman, Jeremy M.; Smoller, Jordan W.; Söderman, Erik; Spencer, Chris CA; Stahl, Eli A.; Strengman, Eric; Strohmaier, Jana; Stroup, T. Scott; Suvisaari, Jaana; Svrakic, Dragan M.; Szatkiewicz, Jin P.; Thirumalai, Srinivas; Tooney, Paul A.; Veijola, Juha; Visscher, Peter M.; Waddington, John; Walsh, Dermot; Webb, Bradley T.; Weiser, Mark; Wildenauer, Dieter B.; Williams, Nigel M.; Williams, Stephanie; Witt, Stephanie H.; Wolen, Aaron R.; Wormley, Brandon K.; Wray, Naomi R.; Wu, Jing Qin; Zai, Clement C.; Adolfsson, Rolf; Andreassen, Ole Andreas; Blackwood, Douglas H.R.; Bramon, Elvira; Buxbaum, Joseph D.; Cichon, Sven; Collier, David A.; Corvin, Aiden; Daly, Mark J.; Darvasi, Ariel; Domenici, Enrico; Esko, Tonu; Gejman, Pablo V.; Gill, Michael; Gurling, Hugh; Hultman, Christina M.; Iwata, Nakao; Jablensky, Assen V.; Jönsson, Erik Gunnar; Kendler, Kenneth S.; Kirov, George; Knight, Jo; Levinson, Douglas F.; Li, Qingqin S.; McCarroll, Steven A.; McQuillin, Andrew; Moran, Jennifer L.; Mowry, Bryan J.; Nöthen, Markus M.; Ophoff, Roel A.; Owen, Michael J.; Palotie, Aarno; Pato, Carlos N.; Petryshen, Tracey L.; Posthuma, Danielle; Rietschel, Marcella; Riley, Brien P.; Rujescu, Dan; Sklar, Pamela; St. Clair, David; Walters, James T.R.; Werge, Thomas; Sullivan, Patrick F.; O'Donovan, Michael C.; Scherer, Stephen W.; Neale, Benjamin M. & Sebat, Jonathan (2017). Contribution of copy number variants to schizophrenia from a genome-wide study of 41,321 subjects. Nature Genetics.  ISSN 1061-4036.  49, s 27- 35 . doi: 10.1038/ng.3725
  • Jørgensen, Silje; Søraas, Arne Vasli; Sundsfjord, Arnfinn; Liestøl, Knut; Leegaard, Truls Michael & Jenum, Pål (2017). Fecal carriage of extended spectrum β-lactamase producing Escherichia coli and Klebsiella pneumoniae after urinary tract infection - A three year prospective cohort study. PLoS ONE.  ISSN 1932-6203.  12:e017w|(16), s 13510- 1 . doi: 10.1371/journal.pone.0173510
  • Sveen, Anita; Johannessen, B; Tengs, T; Danielsen, SA; Eilertsen, Ina Andrassy; Lind, Guro E.; Berg, Kaja Christine Graue; Leithe, Edward; Meza-Zepeda, Leonardo A; Domingo, Enric; Myklebost, Ola; Kerr, David; Tomlinson, Ian; Nesbakken, Arild; Skotheim, Rolf I. & Lothe, Ragnhild A (2017). Multilevel genomics of colorectal cancers with microsatellite instability – clinical impact of JAK1 mutations and consensus molecular subtype 1. Genome Medicine.  ISSN 1756-994X. . doi: DOI: 10.1186/s13073-017-0434-0
  • Russnes, Hege Elisabeth Giercksky; Lingjærde, Ole Christian; Børresen-Dale, Anne-Lise & Caldas, Carlos (2017). Breast cancer molecular stratification– from intrinsic subtypes to integrative clusters. American Journal of Pathology.  ISSN 0002-9440. . doi: 10.1016/j.ajpath.2017.04.022
  • Lågstad, Stian; Zhao, Sen; Hoff, Andreas Midbøe; Johannessen, Bjarne; Lingjærde, Ole Christian & Skotheim, Rolf I. (2017). Chimeraviz: A tool for visualizing chimeric RNA. Bioinformatics.  ISSN 1367-4803.  33(18), s 2954- 2956 . doi: 10.1093/bioinformatics/btx329
  • Silwal-Pandit, Laxmi; Nord, Silje; Gythfeldt, Hedda; Møller, Elen Kristine; Fleischer, Thomas; Rødland, Einar Andreas; Krohn, Marit; Borgen, Elin; Garred, Øystein; Olsen, Tone; Vu, Phuong; Skjerven, Helle; Fangberget, Anne; Holmen, Marit Muri; Schlichting, Ellen; Wille, Elisabeth; Stokke, Mette Nordberg; Vollan, Hans Kristian Moen; Kristensen, Vessela N.; Langerød, Anita; Lundgren, Steinar; Wist, Erik; Naume, Bjørn; Lingjærde, Ole Christian; Børresen-Dale, Anne-Lise & Engebråten, Olav (2017). The longitudinal transcriptional response to neoadjuvant chemotherapy with and without bevacizumab in breast cancer. Clinical Cancer Research.  ISSN 1078-0432.  23(16), s 4662- 4670 . doi: 10.1158/1078-0432.CCR-17-0160
  • Ree, Anne Hansen; Russnes, Hege Elisabeth Giercksky; Heinrich, Daniel; Dueland, Svein; Pedersen, Kjetil Boye; Nygaard, Vigdis; Silwal-Pandit, Laxmi; Østrup, Olga; Hovig, Eivind; Nygaard, Vegard; Rødland, Einar Andreas; Nakken, Sigve; Øien, Janne T; Johansen, Christin; Bergheim, Inger; Skarpeteig, Veronica; Sathermugathevan, Menaka; Sauer, Torill; Lund-Iversen, Marius; Beiske, Klaus; Nasser, Salah; Julsrud, Lars; Reisse, Claudius; Ruud, Espen Asak; Flørenes, Vivi Ann; Hagene, Kirsten T; Aas, Eline; Lurås, Hilde; Soriano, Siv Johnsen; Geitvik, Gry Aarum; Lingjærde, Ole Christian; Børresen-Dale, Anne-Lise; Mælandsmo, Gunhild & Flatmark, Kjersti (2017). Implementing precision cancer medicine in the public health services of Norway: the diagnostic infrastructure and a cost estimate. ESMO Open Cancer Horizons.  ISSN 2059-7029.  2(2) . doi: 10.1136/esmoopen-2017-000158
  • Simovski, Boris; Vodak, Daniel; Gundersen, Sveinung; Domanska, Diana Ewa; Azab, Abdulrahman; Holden, Lars; Holden, Marit; Grytten, Ivar; Rand, Knut Dagestad; Drabløs, Finn Sverre; Johansen, Morten; Mora, Antonio M.; Lund-Andersen, Christin; Fromm, Bastian; Eskeland, Ragnhild; Gabrielsen, Odd Stokke; Ferkingstad, Egil; Nakken, Sigve; Bengtsen, Mads; Nederbragt, Alexander Johan; Thorarensen, Hildur Sif; Andreas Akse, Johannes; Glad, Ingrid Kristine; Hovig, Johannes Eivind & Sandve, Geir Kjetil (2017). GSuite HyperBrowser: integrative analysis of dataset collections across the genome and epigenome. GigaScience.  ISSN 2047-217X. . doi: 10.1093/gigascience/gix032 Show summary
  • Aure, Miriam Ragle; Vitelli, Valeria; Jernström, Sandra Johanna; Kumar, Surendra; Krohn, Marit; Due, Eldri Undlien; Haukaas, Tonje Husby; Leivonen, Suvi-Katri; Vollan, Hans Kristian Moen; Luders, Torben; Rødland, Einar Andreas; Vaske, Charles; Zhao, Wei; Møller, Elen Kristine; Nord, Silje; Giskeødegård, Guro F.; Bathen, Tone Frost; Caldas, Carlos; Tramm, Trine; Alsner, Jan; Overgaard, Jens; Geisler, Jürgen; Bukholm, Ida Rashida Khan; Naume, Bjørn; Schlichting, Ellen; Sauer, Torill; Mills, Gordon B.; Kåresen, Rolf; Mælandsmo, Gunhild; Lingjærde, Ole Christian; Frigessi, Arnoldo; Kristensen, Vessela N.; Børresen-Dale, Anne-Lise; Sahlberg, Kristine Kleivi & OSBREAC, Oslo Breast Cancer Consortium (2017). Integrative clustering reveals a novel split in the luminal A subtype of breast cancer with impact on outcome. Breast Cancer Research.  ISSN 1465-542X.  19(44) . doi: 10.1186/s13058-017-0812-y Full text in Research Archive.
  • Tørresen, Ole Kristian; Star, Bastiaan; Jentoft, Sissel; Reinar, William Brynildsen; Grove, Harald; Miller, Jason R.; Walenz, Brian; Knight, James; Ekholm, Jenny M.; Peluso, Paul; Edvardsen, Rolf; Tooming-Klunderud, Ave; Skage, Morten; Lien, Sigbjørn; Jakobsen, Kjetill Sigurd & Nederbragt, Alexander Johan (2017). An improved genome assembly uncovers prolific tandem repeats in Atlantic cod. BMC Genomics.  ISSN 1471-2164.  18, s 1- 23 . doi: 10.1186/s12864-016-3448-x Full text in Research Archive.
  • Myklebust, June; Brody, Joshua; Kohrt, Holbrook E.; Kolstad, Arne; Czerwinski, Debra K; Waelchli, Sebastien; Green, Michael R.; Trøen, Gunhild; Liestøl, Knut; Beiske, Klaus; Houot, Roch; Delabie, Jan; Alizadeh, Ash A.; Irish, Jonathan M. & Levy, Ronald (2017). Distinct patterns of B-cell receptor signaling in non-Hodgkin lymphomas identified by single-cell profiling. Blood.  ISSN 0006-4971.  129(6), s 759- 770 . doi: 10.1182/blood-2016-05-718494
  • Meisal, Roger; Rounge, Trine Ballestad; Christiansen, Irene Kraus; Eieland, Alexander Kirkeby; Worren, Merete Molton; Molden, Tor; Kommedal, Øyvind; Hovig, Eivind; Leegaard, Truls Michael & Ambur, Ole Herman (2017). HPV Genotyping of Modified General Primer-Amplicons Is More Analytically Sensitive and Specific by Sequencing than by Hybridization. PLoS ONE.  ISSN 1932-6203.  12(1), s 1- 14 . doi: 10.1371/journal.pone.0169074 Full text in Research Archive.
  • Kvisvik, Brede Alexander; Mørkrid, Lars; Røsjø, Helge; Småstuen, Milada Cvancarova; Rowe, Alexander D.; Eek, Christian; Bendz, Bjørn; Edvardsen, Thor & Gravning, Jørgen A. (2017). High-Sensitivity Troponin T vs I in Acute Coronary Syndrome: Prediction of Significant Coronary Lesions and Long-term Prognosis. Clinical Chemistry.  ISSN 0009-9147. . doi: 10.1373/clinchem.2016.261107
  • Taraldsrud, Eli; Aukrust, Pål; Jørgensen, Silje; Lingjærde, Ole Christian; Olweus, Johanna; Myklebust, June & Fevang, Børre (2017). Patterns of constitutively phosphorylated kinases in B cells are associated with disease severity in common variable immunodeficiency. Clinical Immunology.  ISSN 1521-6616.  175, s 69- 74 . doi: 10.1016/j.clim.2016.11.014 Show summary
  • Engeseth, Kristian; Hodnesdal, Christian; Grundvold, Irene; Liestøl, Knut; Gjesdal, Knut; Erikssen, Gunnar; Kjeldsen, Sverre Erik; Erikssen, Jan Emil; Bodegard, Johan & Skretteberg, Torger (2016). Heart rate reserve predicts cardiovascular death among physically unfit but otherwise healthy middle-aged men: a 35-year follow-up study. European Journal of Preventive Cardiology.  ISSN 2047-4873.  23(1), s 59- 66 . doi: 10.1177/2047487314553202
  • Sas-Chen, Aldema; Aure, Miriam Ragle; Leibovich, Limor; Carvalho, Silvia; Enuka, Yehoshua; Körner, Cindy; Polycarpou-Schwarz, Maria; Lavi, Sara; Nevo, Nava; Kuznetsov, Yuri; Yuan, Justin; Azuaje, Francisco; Ulitsky, Igor; Diederichs, Sven; Wiemann, Stefan; Yakhini, Zohar; Kristensen, Vessela N.; Børresen-Dale, Anne-Lise; Yarden, Yosef; Sauer, Torill; Geisler, Jürgen; Hofvind, Solveig; Bathen, Tone Frost; Borgen, Elin; Engebråten, Olav; Fodstad, Øystein; Garred, Øystein; Geitvik, Gry; Kåresen, Rolf; Naume, Bjørn; Mælandsmo, Gunhild; Russnes, Hege Elisabeth Giercksky; Schlichting, Ellen; Sørlie, Therese; Lingjærde, Ole Christian; Sahlberg, Kristine Kleivi; Skjerven, Helle & Fritzman, Britt (2016). LIMT is a novel metastasis inhibiting lncRNA suppressed by EGF and downregulated in aggressive breast cancer. EMBO Molecular Medicine.  ISSN 1757-4676.  8(9), s 1052- 1064 . doi: 10.15252/emmm.201606198 Full text in Research Archive.
  • Alver, Tine Norman; Lavelle, Timothy J; Longva, Ane Sager; Øy, Geir Frode; Hovig, Johannes Eivind & Bøe, Sigurd (2016). MITF depletion elevates expression levels of ERBB3 receptor and its cognate ligand NRG1-beta in melanoma. OncoTarget.  ISSN 1949-2553.  7(34), s 55128- 55140 . doi: 10.18632/oncotarget.10422 Show summary
  • Haugvik, Sven-Petter; Vodak, Daniel; Haugom, Lisbeth; Hovig, Johannes Eivind; Gladhaug, Ivar Prydz; Heim, Sverre & Micci, Francesca (2016). Transcriptomic Profiling of Tumor Aggressiveness in Sporadic Nonfunctioning Pancreatic Neuroendocrine Neoplasms. Pancreas.  ISSN 0885-3177.  45(8), s 1196- 1203 . doi: 10.1097/MPA.0000000000000610
  • Rognes, Torbjørn; Flouri, Tomáš; Nichols, Ben; Quince, Christopher & Mahé, Frédéric (2016). VSEARCH: A versatile open source tool for metagenomics. PeerJ.  ISSN 2167-8359.  4(10) . doi: 10.7717/peerj.2584 Full text in Research Archive. Show summary
  • Sourouri, Mohammed; Scott, Baden & Cai, Xing (2016). Panda: A Compiler Framework for Concurrent CPU+GPU Execution of 3D Stencil Computations on GPU-accelerated Supercomputers. International journal of parallel programming.  ISSN 0885-7458.  45(3), s 711- 729 . doi: 10.1007/s10766-016-0454-1 Show summary
  • Ramberg, Håkon Andre; Grytli, Helene Hartvedt; Nygård, Ståle; Wang, Wanzhong; Øgren, Hans Olav; Zhao, Sen; Løvf, Marthe; Katz, Betina; Skotheim, Rolf I.; Bjartell, Anders; Eri, Lars Magne; Berge, Viktor; Svindland, Aud & Tasken, Kristin Austlid (2016). PBX3 is a putative biomarker of aggressive prostate cancer. International Journal of Cancer.  ISSN 0020-7136.  139(8), s 1810- 1820 . doi: 10.1002/ijc.30220
  • Namouchi, Amine; Gomez Munoz, Marta; Frye, Stephan Alfons; Moen, Line Victoria; Rognes, Torbjørn; Tonjum, Tone & Balasingham, Seetha (2016). The Mycobacterium tuberculosis transcriptional landscape under genotoxic stress. BMC Genomics.  ISSN 1471-2164.  17 . doi: 10.1186/s12864-016-3132-1 Show summary
  • Lyngbakken, Magnus Nakrem; Røsjø, Helge; Holmen, Oddgeir; Nygård, Ståle; Dalen, Håvard; Hveem, Kristian & Omland, Torbjørn (2016). Gender, High-Sensitivity Troponin I, and the Risk of Cardiovascular Events (from the Nord-Trøndelag Health Study).. American Journal of Cardiology.  ISSN 0002-9149.  118(6), s 816- 821 . doi: 10.1016/j.amjcard.2016.06.043
  • Sveen, Anita; Løes, Inger Marie; Alagaratnam, Sharmini; Nilsen, Gro; Høland, Maren; Lingjærde, Ole Christian; Sorbye, Halfdan; Berg, Kaja Christine Graue; Horn, Arild; Angelsen, Jon-Helge; Knappskog, Stian; Lønning, Per Eystein & Lothe, Ragnhild A (2016). Intra-patient inter-metastatic genetic heterogeneity in colorectal cancer as a key determinant of survival after curative liver resection. PLoS Genetics.  ISSN 1553-7390.  12:e1006225(7) . doi: 10.1371/journal.pgen.1006225
  • Riise, Atle; Mannino, Carlo & Lamorgese, Leonardo Cameron (2016). Recursive logic-based Benders’ decomposition for multi-mode outpatient scheduling. European Journal of Operational Research.  ISSN 0377-2217.  255(3), s 719- 728 . doi: 10.1016/j.ejor.2016.06.015 Show summary
  • Funke, Simon Wolfgang; Kramer, Stephan C. & Piggott, Matthew D. (2016). Design optimisation and resource assessment for tidal-stream renewable energy farms using a new continuous turbine approach. Renewable Energy.  ISSN 0960-1481.  99, s 1046- 1061 . doi: 10.1016/j.renene.2016.07.039 Show summary
  • Star, Bastiaan; Tørresen, Ole Kristian; Nederbragt, Alexander Johan; Jakobsen, Kjetill Sigurd; Pampoulie, Christophe & Jentoft, Sissel (2016). Genomic characterization of the Atlantic cod sex-locus. Scientific Reports.  ISSN 2045-2322.  6, s 1- 9 . doi: 10.1038/srep31235
  • Domanska, Diana Ewa & Lukasik, Szymon (2016). Handling high-dimensional data in air pollution forecasting tasks. Ecological Informatics.  ISSN 1574-9541.  34, s 70- 91 . doi: 10.1016/j.ecoinf.2016.04.007
  • Skarpengland, Tonje; Holm, Sverre; Scheffler, Katja; Gregersen, Ida; Dahl, Tuva Børresdatter; Suganthan, Rajikala; Segers, Filip; Østlie, Ingunn; Otten, Jeroen J.T.; Gomez, Luisa Fernanda Luna; Ketelhuth, Daniel F.J.; Lundberg, Anna M.; Neurauter, Christine Gran; Hildrestrand, Gunn Annette; Skjelland, Mona; Bjørndal, Bodil; Svardal, Asbjørn M.; Iversen, Per Ole; Hedin, Ulf; Nygård, Ståle; Olstad, Ole Kristoffer; Krohg-Sørensen, Kirsten; Slupphaug, Geir; Eide, Lars; Kusnierczyk, Anna; Folkersen, Lasse; Ueland, Thor; Berge, Rolf Kristian; Hansson, Göran K.; Biessen, Erik A.L.; Halvorsen, Bente; Bjørås, Magnar & Aukrust, Pål (2016). Neil3-dependent base excision repair regulates lipid metabolism and prevents atherosclerosis in Apoe-deficient mice. Scientific Reports.  ISSN 2045-2322.  6:28337 . doi: 10.1038/srep28337
  • Johnsen, Gaute Floer; Sundnes, Joakim; Wengenroth, Jonas & Haugen, Håvard Jostein (2016). Methodology for Morphometric Analysis of Modern Human contralateral Premolars. Journal of computer assisted tomography.  ISSN 0363-8715.  40(4), s 617- 625 . doi: 10.1097/RCT.0000000000000417
  • Børnich, Claus; Grytten, Ivar; Hovig, Johannes Eivind; Paulsen, Jonas; Cech, Martin & Sandve, Geir Kjetil (2016). Galaxy Portal: Interacting with the galaxy platform through mobile devices. Bioinformatics.  ISSN 1367-4803.  32(11), s 1743- 1745 . doi: 10.1093/bioinformatics/btw042
  • Haakensen, Vilde Drageset; Nygaard, Vegard; Greger, Liliana; Aure, Miriam Ragle; Fromm, Bastian; Bukholm, Ida Rashida Khan; Luders, Torben; Chin, Suet-Feung; Git, Anna; Caldas, Carlos; Kristensen, Vessela N.; Brazma, Alvis; Børresen-Dale, Anne-Lise; Hovig, Johannes Eivind & Helland, Åslaug (2016). Subtype-specific micro-RNA expression signatures in breast cancer progression. International Journal of Cancer.  ISSN 0020-7136.  139(5), s 1117- 1128 . doi: 10.1002/ijc.30142
  • Björklund, Andreas T.; Clancy, Trevor; Goodridge, Jodie; Béziat, Vivien; Schaffer, Marie; Hovig, Johannes Eivind; Ljunggren, Hans-Gustaf; Ljungman, Per T. & Malmberg, Karl-Johan (2016). Naive donor NK cell repertoires associated with less leukemia relapse after allogeneic hematopoietic stem cell transplantation. Journal of Immunology.  ISSN 0022-1767.  196(3), s 1400- 1411 . doi: 10.4049/jimmunol.1501434
  • Vaccaro, Carlos A.; Sarroca, Carlos; Rossi, Benedito; Lopez-Kostner, Francisco; Dominguez Valentin, Mev; Calo, Natalia Causada; Cutait, Raul; Valle, Adriana Della; Nuñez, Lina; Neffa, Florencia; Alvarez, Karin; Gonzalez, Maria Laura; Kalfayan, Pablo; Lynch, Henry T. & Church, James (2016). Lynch syndrome in South America: past, present and future. Familial Cancer.  ISSN 1389-9600.  15(3), s 437- 445 . doi: 10.1007/s10689-016-9903-7
  • Balaban, Gabriel; Alnæs, Martin Sandve; Sundnes, Joakim & Rognes, Marie Elisabeth (2016). Adjoint multi-start-based estimation of cardiac hyperelastic material parameters using shear data. Biomechanics and Modeling in Mechanobiology.  ISSN 1617-7959.  s 1- 13 . doi: 10.1007/s10237-016-0780-7
  • Christ, Liliane Florence; Wenzel, Eva; Liestøl, Knut; Raiborg, Camilla; Campsteijn, Coen & Stenmark, Harald Alfred (2016). ALIX and ESCRT-I/II function as parallel ESCRT-III recruiters in cytokinetic abscission. Journal of Cell Biology.  ISSN 0021-9525.  212(5), s 499- 513 . doi: 10.1083/jcb.201507009
  • Blaker, Yngvild Nuvin; Spetalen, Signe; Eide, Marianne Brodtkorb; Lingjærde, Ole Christian; Beiske, Klaus; Østenstad, Bjørn; Sander, Birgitta; Wahlin, Björn Engelbrekt; Melen, Christopher Michael; Myklebust, June; Holte, Harald; Delabie, Jan & Smeland, Erlend B (2016). The tumour microenvironment influences survival and time to transformation in follicular lymphoma in the rituximab era. British Journal of Haematology.  ISSN 0007-1048.  175(1), s 102- 114 . doi: 10.1111/bjh.14201
  • Haukaas, Tonje Husby; Euceda, Leslie R.; Giskeødegård, Guro F.; Lamichhane, Santosh; Krohn, Marit; Jernström, Sandra Johanna; Aure, Miriam Ragle; Lingjærde, Ole Christian; Schlichting, Ellen; Garred, Øystein; Due, Eldri Undlien; Mills, Gordon B.; Sahlberg, Kristine Kleivi; Børresen-Dale, Anne-Lise & Bathen, Tone Frost (2016). Metabolic clusters of breast cancer in relation to gene- and protein expression subtypes. Cancer & Metabolism.  ISSN 2049-3002.  4 . doi: 10.1186/s40170-016-0152-x Full text in Research Archive.
  • Sandhu, Vandana; Wedge, David C.; Lothe, Inger Marie Bowitz; Labori, Knut Jørgen; Dentro, Stefan C.; Buanes, Trond; Skrede, Martina; Larsen, Astrid Marie; Munthe, Else; Myklebost, Ola; Lingjærde, Ole Christian; Børresen-Dale, Anne-Lise; Andersen, Tone Ikdahl; Van Loo, Peter; Nord, Silje & Kure, Elin H. (2016). The genomic landscape of pancreatic and periampullary adenocarcinoma. Cancer Research.  ISSN 0008-5472.  76(17), s 5092- 5102 . doi: 10.1158/0008-5472.CAN-16-0658
  • Nik-Zainal, Serena; Davies, Helen; Staaf, Johan; Ramakrishna, Manasa; Glodzik, Dominik; Zou, Xueqing; Martincorena, Inigo; Alexandrov, Ludmil B.; Martin, Sancha; Wedge, David C.; Van Loo, Peter; Ju, Young Seok; Smid, Marcel; Brinkman, Arie; Morganella, Sandro; Aure, Miriam Ragle; Lingjærde, Ole Christian; Langerød, Anita; Ringnér, Markus; Ahn, Sung-Min; Boyault, Sandrine; Brock, Jane E.; Broeks, Annegien; Butler, Adam; Desmedt, Christine; Dirix, Luc; Dronov, Serge; Fatima, Aquila; Foekens, John A.; Gerstung, Moritz; Hooijer, Gerrit K.J.; Jang, Se Jin; Jones, David R.; Kim, Hyung-Yong; King, Tari A.; Krishnamurthy, Savitri; Lee, Hee Jin; Lee, Jeong-Yeon; Li, Yilong; McLaren, Stuart; Menzies, Andrew; Mustonen, Ville; O'Meara, Sarah; Pauporté, Iris; Pivot, Xavier; Purdie, Colin A.; Raine, Keiran; Ramakrishnan, Kamna; Rodriguez-González, F. Germán; Romieu, Gilles; Sieuwerts, Anieta M.; Simpson, Peter T.; Shepherd, Rebecca; Stebbings, Lucy; Stefansson, Olafur A.; Teague, Jon; Tommasi, Stefania; Treilleux, Isabelle; Eynden, Gert G. Van den; Vermeulen, Peter; Vincent-Salomon, Anne; Yates, Lucy; Caldas, Carlos; Van't Veer, Laura; Tutt, Andrew; Knappskog, Stian; Tan, Benita Kiat Tee; Jonkers, Jos; Borg, Åke; Ueno, Naoto T.; Sotiriou, Christos; Viari, Alain; Futreal, P. Andrew; Campbell, Peter J.; Span, Paul N.; Van Laere, Steven; Lakhani, Sunil R.; Eyfjörd, Jórunn E.; Thompson, Alastair M.; Birney, Ewan; Stunnenberg, Hendrik G.; van de Vijver, Marc J.; Martens, John W. M.; Børresen-Dale, Anne-Lise; Richardson, Andrea L.; Kong, Gu; Thomas, Gilles & Stratton, Michael R. (2016). Landscape of somatic mutations in 560 breast cancer whole-genome sequences. Nature.  ISSN 0028-0836.  534(7605), s 47- 54 . doi: 10.1038/nature17676
  • Späth, Florentin; Andersson, Ulrika; Dahlin, Anna M; Langseth, Hilde; Hovig, Johannes Eivind; Johannesen, Tom Børge; Grankvist, Kjell; Björkblom, Benny; Wibom, Carl & Melin, Beatrice (2016). Pre-diagnostic serum levels of EGFR and ErbB2 and genetic glioma risk variants: a nested case-control study. Tumour Biology.  ISSN 1010-4283.  37(8), s 11065- 11072 . doi: 10.1007/s13277-015-4742-y
  • Jørgensen, Magne; Dybå, Tore; Liestøl, Knut & Sjøberg, Dag (2016). Incorrect results in software engineering experiments: How to improve research practices. Journal of Systems and Software.  ISSN 0164-1212.  116, s 133- 145 . doi: 10.1016/j.jss.2015.03.065 Show summary
  • Halvorsen, Ann Rita; Silwal-Pandit, Laxmi; Meza, Leonardo Zepeda; Vodak, Daniel; Vu, Phuong Ngoc Thi; Sagerup, Camilla Maria Troøien; Hovig, Johannes Eivind; Myklebost, Ola; Børresen-Dale, Anne-Lise; Brustugun, Odd Terje & Helland, Åslaug (2016). TP53 mutation spectrum in smokers and never smoking lung cancer patients. Frontiers in Genetics.  ISSN 1664-8021.  7(MAY) . doi: 10.3389/fgene.2016.00085 Show summary
  • Tørresen, Ole Kristian; Rise, Matthew L.; Jin, Xingkun; Star, Bastiaan; MacKenzie, Simon; Jakobsen, Kjetill Sigurd; Nederbragt, Alexander Johan & Jentoft, Sissel (2016). An improved version of the Atlantic cod genome and advancements in functional genomics: implications for the future of cod farming, In Simon MacKenzie & Sissel Jentoft (ed.),  Genomics in Aquaculture.  Elsevier.  ISBN 9780128014189.  3.  s 45 - 72
  • Tørresen, Ole Kristian; Star, Bastiaan; Jentoft, Sissel; Jakobsen, Kjetill Sigurd & Nederbragt, Alexander Johan (2016). The new era of genome sequencing using high-throughput sequencing technology: Generation of the first version of the Atlantic cod genome, In Simon MacKenzie & Sissel Jentoft (ed.),  Genomics in Aquaculture.  Elsevier.  ISBN 9780128014189.  1.  s 1 - 20
  • Solbakken, Monica Hongrø; Tørresen, Ole Kristian; Nederbragt, Alexander Johan; Seppola, Marit; Gregers, Tone Fredsvik; Jakobsen, Kjetill Sigurd & Jentoft, Sissel (2016). Evolutionary redesign of the Atlantic cod (Gadus morhua L.) Toll-like receptor repertoire by gene losses and expansions. Scientific Reports.  ISSN 2045-2322.  6 . doi: 10.1038/srep25211 Full text in Research Archive. Show summary
  • Kummen, Martin; Holm, Kristian; Anmarkrud, Jarl Andreas; Nygård, Ståle; Vesterhus, Mette; Høivik, Marte; Trøseid, Marius; Marschall, Hanns-Ulrich; Schrumpf, Erik; Moum, Bjørn; Røsjø, Helge; Aukrust, Pål; Karlsen, Tom Hemming & Hov, Johannes Espolin Roksund (2016). The gut microbial profile in patients with primary sclerosing cholangitis is distinct from patients with ulcerative colitis without biliary disease and healthy controls. Gut.  ISSN 0017-5749.  66(4), s 611- 619 . doi: 10.1136/gutjnl-2015-310500 Show summary
  • Nygaard, Vegard; Rødland, Einar Andreas & Hovig, Johannes Eivind (2016). Methods that remove batch effects while retaining group differences may lead to exaggerated confidence in downstream analyses. Biostatistics.  ISSN 1465-4644.  17(1), s 29- 39 . doi: 10.1093/biostatistics/kxv027
  • Zhang, Wei & Cai, Xing (2016). Solving 3D Time-Fractional Diffusion Equations by High-Performance Parallel Computing. Fractional Calculus and Applied Analysis.  ISSN 1311-0454.  19(1), s 140- 160 . doi: 10.1515/fca-2016-0008
  • Mortensen, Mikael & Langtangen, Hans Petter (2016). High performance Python for direct numerical simulations of turbulent flows. Computer Physics Communications.  ISSN 0010-4655.  203, s 53- 65 . doi: 10.1016/j.cpc.2016.02.005 Full text in Research Archive.
  • Kopylova, Evguenia; Navas-Molina, Jose A.; Mercier, Céline; Xu, Zhenjiang Zech; Mahé, Frédéric; He, Yan; Zhou, Hong-Wei; Rognes, Torbjørn; Caporaso, J. Gregory & Knight, Rob (2016). Open-Source Sequence Clustering Methods Improve the State Of the Art. mSystems.  ISSN 2379-5077.  1(1) . doi: 10.1128/mSystems.00003-15 Show summary
  • Støverud, Karen-Helene; Alnæs, Martin Sandve; Langtangen, Hans Petter; Haughton, Victor & Mardal, Kent-Andre (2016). Poro-elastic modeling of Syringomyelia – a systematic study of the effects of pia mater, central canal, median fissure, white and gray matter on pressure wave propagation and fluid movement within the cervical spinal cord. Computer Methods in Biomechanics and Biomedical Engineering.  ISSN 1025-5842.  19(6), s 686- 698 . doi: 10.1080/10255842.2015.1058927
  • Samarakoon, Pubudu Saneth; Sorte, Hanne Sørmo; Stray-Pedersen, Asbjørg; Rødningen, Olaug Kristin; Rognes, Torbjørn & Lyle, Robert (2016). cnvScan: A CNV screening and annotation tool to improve the clinical utility of computational CNV prediction from exome sequencing data. BMC Genomics.  ISSN 1471-2164.  17(51) . doi: 10.1186/s12864-016-2374-2
  • Kjersem, Janne Beathe; Thomsen, Maria; Guren, Tormod Kyrre; Hamfjord, Julian; Carlsson, G; Gustavsson, B.; Ikdahl, Tone; Indrebø, Gunnar; Pfeiffer, P; Lingjærde, Ole Christian; Tveit, Magne Kjell; Wettergren, Y & Kure, Elin H. (2016). AGXT and ERCC2 polymorphisms are associated with clinical outcome in metastatic colorectal cancer patients treated with 5-FU/oxaliplatin. The Pharmacogenomics Journal.  ISSN 1470-269X.  16(3), s 272- 279 . doi: 10.1038/tpj.2015.54
  • Sandhu, Vandana; Lothe, Inger Marie Bowitz; Labori, Knut Jørgen; Skrede, Martina; Hamfjord, Julian; Larsen, Astrid Marie; Buanes, Trond; Dube, Gugu; Kale, MM; Sawant, S; Kulkarni-Kale, U; Børresen-Dale, Anne-Lise; Lingjærde, Ole Christian & Kure, Elin H. (2016). Differential expression of miRNAs in pancreatobiliary type of periampullary adenocarcinoma and its associated stroma. Molecular Oncology.  ISSN 1574-7891.  10(2), s 303- 316 . doi: 10.1016/j.molonc.2015.10.011
  • Riise, Atle; Mannino, Carlo & Burke, Edmund K. (2016). Modelling and solving generalised operational surgery scheduling problems. Computers & Operations Research.  ISSN 0305-0548.  66, s 1- 11 . doi: 10.1016/j.cor.2015.07.003 Show summary

View all works in Cristin

  • Slettemeås, Jannice Schau; Sekse, Camilla & Lagesen, Karin (2017). Quinolone resistant Escherichia coli in Norwegian poultry and their impact on humans.
  • Canon, Richard; Azab, Abdulrahman; Sica, Jeffrey; Kurtzer, Gregory; Priedhorsky, Reid; Younge, Andrew & Randles, Tim (2017). Containers in HPC.
  • Møller, Pål & Hovig, Eivind (2017). Our genes, our selves: hereditary breast cancer and biological citizenship in Norway. Medicine, Health care and Philosophy.  ISSN 1386-7423.  Published ahead of print, s 1- 4 . doi: 10.1007/s11019-017-9803-0
  • Cai, Xing (2017). OpenMP Programming.
  • Lagesen, Karin; Kaspersen, Håkon; Slettemeås, Jannice Schau; Sekse, Camilla & Urdahl, Anne Margrete (2017). BIFROST: A flexible and portable genomic read set characterization pipeline.
  • Slettemeås, Jannice Schau; Norström, Madelaine; Sunde, Marianne; Urdahl, Anne Margrete; Wester, Astrid Lousie; Lagesen, Karin; Simonsen, Gunnar Skov; Ulstad, Charlotte Rosenberg & Sekse, Camilla (2017). Quinolone resistant Escherichia coli from broiler in Norway - characterization, comparison to human isolates and molecular risk assessment. Show summary
  • Aamdal, Steinar; Bentzen, Heidi Beate; Borge, Ole Johan; Erikstein, Bjørn K; Grimsgaard, Sameline; Hovig, Johannes Eivind; Myklebost, Ola & Widerberg, Ketil (2017). Åpne Nordens grenser for forskning og behandling. Aftenposten (morgenutg. : trykt utg.).  ISSN 0804-3116.
  • Holden, Lars; Jullum, Martin & Sandve, Geir Kjetil (2017). Statistical modeling of repertoire overlap in entire sampling spaces. NR-notat. SAMBA/13/17. Show summary
  • Spilsberg, Bjørn; Lagesen, Karin; Kristoffersen, Anja Bråthen & Holst-Jensen, Arne (2017). Identification and quantification of genetically modified organisms (GMO) from high throughput sequencing data.
  • Tennøe, Simen (2017). Hvordan kan vi modelere hjernen med en datamaskin?.
  • Eide, Marta; Puntervoll, Pål; Lille-Langøy, Roger; Goldstone, Jared V.; Tørresen, Ole Kristian; Nederbragt, Alexander Johan; Rydbeck, Halfdan; Jakobsen, Kjetill Sigurd; Stegeman, John; Goksøyr, Anders & Karlsen, Odd Andre (2016). Chemical warfare in the marine environment: genomic survey of the Atlantic cod (Gadus morhua) defensome reveals the absence of an important xenosensor.
  • Tennøe, Simen & Feinberg, Jonathan (2016). Chaospy: A modular implementation of Polynomial Chaos Expansions and Monte Carlo methods.
  • Mobarhan, Milad; Tennøe, Simen & Solbrå, Andreas Våvang (2016). Neuronify: a new tool for creating simple neural networks.
  • Mobarhan, Milad; Dragly, Svenn-Arne; Tennøe, Simen & Solbrå, Andreas Våvang (2016). Introduction to Computational Biology with Python.

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