Srinidhi Varadharajan

Image of Srinidhi Varadharajan
Mobile phone 44154
Room 3302E

Academic interests

I am a new PhD student at CEES started around the end of September 2014. I hold a Masters degree in Bioinformatics and my primary interest is in the field of genomics.  

My research work at CEES, under the supervision of Asbjørn Vøllestad and Kjetill Jakobsen, will involve analysis of sequence data from Grayling. Being a part of an interdisciplinary environment like CELS I look forward to working with statisticians and informaticians to solve some important biological questions related to teleost fishes.


  • Riiser, Even Sannes; Haverkamp, Thomas Hendricus Augustus; Varadharajan, Srinidhi; Borgan, Ørnulf; Jakobsen, Kjetill Sigurd; Jentoft, Sissel & Star, Bastiaan (2019). Switching on the light: using metagenomic shotgun sequencing to characterize the intestinal microbiome of Atlantic cod. Environmental Microbiology.  ISSN 1462-2912.  21(7), s 2576- 2594 . doi: 10.1111/1462-2920.14652 Full text in Research Archive.
  • Savilammi, Tiina; Primmer, Craig R.; Varadharajan, Srinidhi; Guyomard, Rene; Guiguen, Yann; Sandve, Simen Rød; Vøllestad, Leif Asbjørn; Papakostas, Spiros & Lien, Sigbjørn (2019). The chromosome-level genome assembly of european grayling reveals aspects of a unique genome evolution process within salmonids. G3: Genes, Genomes, Genetics.  ISSN 2160-1836.  9(5), s 1283- 1294 . doi: 10.1534/g3.118.200919 Full text in Research Archive.
  • Varadharajan, Srinidhi; Rastas, Pasi; Löytynoja, Ari; Matschiner, Michael; Calboli, Federico C. F.; Guo, Baocheng; Nederbragt, Alexander Johan; Jakobsen, Kjetill Sigurd & Merilä, Juha (2019). A High-Quality Assembly of the Nine-Spined Stickleback (Pungitius pungitius) Genome. Genome Biology and Evolution.  ISSN 1759-6653.  11(11), s 3291- 3308 . doi: 10.1093/gbe/evz240 Full text in Research Archive.
  • Varadharajan, Srinidhi; Sandve, Simen Rød; Gillard, Gareth Benjamin; Tørresen, Ole K.; Mulugeta, Teshome Dagne; Hvidsten, Torgeir Rhoden; Lien, Sigbjørn; Vøllestad, Leif Asbjørn; Jentoft, Sissel; Nederbragt, Alexander Johan & Jakobsen, Kjetill Sigurd (2018). The grayling genome reveals selection on gene expression regulation after whole-genome duplication. Genome Biology and Evolution.  ISSN 1759-6653.  10(10), s 2785- 2800 . doi: 10.1093/gbe/evy201 Full text in Research Archive.

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  • Milec, Leona Johanna M; Dubin, Arseny; Kapepula, Lumami; Masilya, Pascal; Mulimbwa, N'sibula; Muterezi Bukinga, Fidel; Varadharajan, Srinidhi; Wagner, Catherine E.; Vanhove, Maarten, P. M. & Raeymaekers, Joost A. M. (2019). Rearranged and relocated: chromosome-level assemblies and comparative genomics of two pelagic freshwater herring species..
  • Sandve, Simen Rød; Hvidsten, Torgeir Rhoden; Lien, Sigbjørn; Rori, Rohlfs; Jakobsen, Kjetill Sigurd; Nome, Torfinn; Varadharajan, Srinidhi; Nederbragt, Alexander Johan & Vøllestad, Leif Asbjørn (2017). Evolution after whole genome duplication - insights from the salmonids.
  • Varadharajan, Srinidhi (2017). Selection on gene duplicates following whole genome duplication: What do we learn from salmonid genomes?.
  • Varadharajan, Srinidhi (2016). Whole genome duplication in salmonids. What to do with all those extra, duplicated genes?.
  • Varadharajan, Srinidhi (2015). The grayling genome – comparative genomics of salmonids.

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Published Oct. 30, 2014 4:24 PM - Last modified Jan. 19, 2015 10:51 AM