Reinar, W. R., Greulich, A., Stø, I. M., Knutsen, J. B., Reitan, T., Tørresen, O. K., Jentoft, S., Butenko, M. A., Jakobsen, K. S. 2023. Adaptive protein evolution through length variation of short tandem repeats in Arabidopsis. Science Advances. DOI: 10.1126/sciadv.add6960
Pinninti, L. R., Maurstad, M. F., Hoff, S. N. K., Kristensen, T., Noble, L. R., Jentoft, S., Fernandes, J. M. O. 2023. The complete mitochondrial genome of the Atlantic spiny lumpsucker Eumicrotremus spinosus (Fabricius, 1776). Mitochondrial DNA Part B, 8:3, 364-367, DOI: 10.1080/23802359.2023.2184649
Theissinger, K., Fernandes, C., Formenti, G., Bista, I., Berg, P. R., Bleidorn, C., Bombarely, A., Crottini, A.,Gallo, G. R., Godoy, J. A., Jentoft, S., Malukiewicz, J., Mouton, A., Oomen, R. A., Paez, S., Palsbøll, P. J., Pampoulie, C., Ruiz-López, M. J., Secomandi, S. Svardal, H., Theofanopoulou, C., de Vries, J., Waldvogel, A.-M., Zhang, G., Jarvis, E. D., Bálint, M., Ciofi, C., Waterhouse, R. M., Mazzoni, C. J., Höglund, J. 2023. The European Reference Genome Atlas Consortium. How genomics can help biodiversity conservation. Trends in Genetics. https://doi.org/10.1016/j.tig.2023.01.005
Bjørnestad, S. A., Solbakken, M. H., Jakobsen, K. S., Jentoft, S., Bakke, O., Progida, C. 2023. Atlantic cod (Gadus morhua) MHC I localizes to endolysosomal compartments independently of cytosolic sorting signals. Frontiers in Cell and Developmental Biology. doi: 10.3389/fcell.2023.1050323
Ghorbani, A., Khataeipour, S. J., Solbakken, M. H., Huebert, D. N. G., Khoddami, M., Eslamloo, K., Collins, C., Hori, T., Jentoft, S., Rise, M. L., Larijani M. 2022. Ancestral reconstruction reveals catalytic inactivation of activation-induced cytidine deaminase concomitant with cold water adaption in the Gadiformes bony fish. BMC Biology. 20(1):293. doi: 10.1186/s12915-022-01489-8
Weist, P., Jentoft, S., Tørresen, O. K., Schade, F. M., Pampoulie, C., Krumme, U., Hanel, R. 2022. The role of genomic signatures of directional selection and demographic history in the population structure of a marine teleost with high gene flow. Ecology and Evolution. https://doi.org/10.1002/ece3.9602
Martínez-García, L., Ferrari, G., Cuevas, A., Atmore, L. M., López-Arias, B., Culling, M., Llorente-Rodríguez, L., Morales-Muñiz, A., Roselló-Izquierdo, E., Quirós, J.-A., Marlasca-Martín, R., Hänfling, B., Hutchinson, W. F., Jakobsen, K. S., Jentoft, S., Orton, D., Star, B., Barrett, J. H. 2022. Ancient DNA evidence for the ecological globalization of cod fishing in medieval and post-medieval Europe. Proceedings of the Royal Society B. https://doi.org/10.1098/rspb.2022.1107
Nilsson, P., Ravinet, M., Cui, Y., Berg, P. R., Zhang, Y., Guo, R., Luo, T., Song, Y., Trucchi, E., Hoff, S. N. K., Lv, R., Schmid, B. V., Easterday, R. W., Jakobsen, K. S., Stenseth, N. C., Yang, R., Jentoft, S. 2022. Polygenic plague resistance in the great gerbil uncovered by population sequencing. PNAS Nexus. doi.org/10.1093/pnasnexus/pgac211
Oomen, R. A., Knutsen, H., Olsen, E. M., Jentoft, S., Stenseth, N. C., Hutchings, J. A. 2022. Warming Accelerates the Onset of the Molecular Stress Response and Increases Mortality of Larval Atlantic Cod. Integrative and Comparative Biology. doi.org/10.1093/icb/icac145
Pampoulie, C., Berg, P. R., Jentoft, S. 2022. Hidden but revealed: After years of genetic studies behavioural monitoring combined with genomics uncover new insight into the population dynamics of Atlantic cod in Icelandic waters. Evolutionary Applications. DOI: 10.1111/eva.13471
Lancaster, L. T., Fuller, Z. L., Berger, D., Barbour, M. A., Jentoft, S., Wellenreuther, M. 2022. Understanding climate change response in the age of genomics. Journal of Animal Ecology. DOI: 10.1111/1365-2656.13711
Martínez-García, L., Ferrari, G., Hufthammer, A. K., Jakobsen, K. S., Jentoft, S., Barrett, J. H., Star, B.. 2022. Ancient DNA reveals a southern presence of the North East Arctic cod during the Holocene. Biology Letters. https://doi.org/10.1098/rsbl.2022.0021
Knutsen, H.,Catarino, D.,Rogers, L., Sodeland, M., Mattingsdal, M., Jahnke, M., Hutchings, J. A., Mellerud, I., Espeland, S. H., Johanneson, K., Roth, O., Hansen, M. M., Jentoft, S., André, C., Jorde, P. E. 2022. Combining population genomics with demographic analyses highlights habitat patchiness and larval dispersal as determinants of connectivity in coastal fish species. Molecular Ecology. https://doi.org/10.1111/mec.16415
Matschiner, M., Barth, J. M. I., Tørresen, O. K., Star, B., Baalsrud, H. T., Brieuc, M. S. O., Pampoulie, C., Bradbury, I., Jakobsen, K. S., Jentoft, S. 2022. Supergene origin and maintenance in Atlantic cod. Accepted Nature Ecology & Evolution. DOI : 10.1038/s41559-022-01661-x
Sodeland, M., Jentoft, S., Jorde, P. E., Mattingsdal, M., Albretsen, J., Kleiven, A. R., Synnes, A.-E., Espeland, S. H., Olsen, E. M., Andrè, C., Stenseth, N. C., Knutsen, H. 2022. Stabilizing selection on Atlantic cod supergenes through a millennium of extensive exploitation. PNAS. https://doi.org/10.1073/pnas.2114904119
Parker, J., Guslund, N. C., Jentoft, S., Olivia Roth, O. 2022. Characterization of pipefish immune cell populations through single-cell transcriptomics. Frontiers Immunology. 13: 820152. doi: 10.3389/fimmu
Formenti, G., Theissinger, K., Fernandes, C., Bista, I., Bombarely, A. Bleidorn, C., Ciofi, C., Crottini, A., Godoy, J. A., Höglund, J., Malukiewicz, J., Mouton, A., Oomen, R. A., Paez, S., Palsbøll, P. J., Pampoulie, C., Ruiz-López, M. J., Svardal, H., Theofanopoulou, C., Vries, J., Waldvogel, A.-M., Zhang, G., Mazzoni, C. J., Jarvis, E. D., Bálint, M. and the European Reference Genome Atlas (ERGA) Consortium (including Jentoft, S.). 2022. The era of reference genomes in conservation genomics. TREE. https://doi.org/10.1016/j.tree.2021.11.008
Parker, J., Dubin, A., Schneider, R., Wagner, K. S., Jentoft, S., Böhne, A., Bayer, T., Roth, O. 2021. Immunological tolerance in the evolution of male pregnancy. Molecular Ecology. doi: 10.1111/mec.16333
Ferrari, G., Atmore, L. M., Jentoft, S., Jakobsen, K. S., Makowiecki, D., Barrett, J. H., Star, B. 2021. An accurate assignment test for extremely low-coverage whole-genome sequence data. Molecular Ecology Resources. doi.org/10.1111/1755-0998.13551
Martínez-García, L., Ferrari, G., Oosting, T., Ballantyne, R., van der Jagt, I., Ystgaard, I., Harland, J., Nicholson, R., Hamilton-Dyer, S., Baalsrud, H. T., Brieuc, M. S. O., Atmore, L. M., Burns, F., Schmölcke, U., Jakobsen, K. S., Jentoft, S., Orton, D., Hufthammer, A. K., Barrett, J. H., Star, B.. 2021. Historical demographic processes dominate genetic variation in ancient Atlantic cod mitogenomes. Frontiers in Ecology and Evolution. https://doi.org/10.3389/fevo.2021.671281
Pinsky, M. L., Eikeset, A. M., Helmerson, C., Bradbury, I. R., Bentzen, P. Morris, C., Gondek, A., Helle Tessand Baalsrud, H. T., Brieuc, M. S. O., Kjesbu, O. S., Godiksen, J. A., Barth, J. M. I., Matschiner, M., Stenseth, N. C., Jakobsen, K. S., Jentoft, S., Star, B. 2021. Genomic stability through time despite decades of exploitation in cod on both sides of the Atlantic. PNAS. https://doi.org/10.1073/pnas.2025453118
Jin, X., Morro, B, Tørresen, O. K., Moiche, V., Solbakken, M. H., Jakobsen, K. S., Jentoft, S., MacKenzie, S. 2020. Innovation in NLR and TLR sensing drives the MHC-II free Atlantic cod immune system. Frontiers in Immunology. https://doi.org/10.3389/fimmu.2020.609456
Ronco, F., Matschiner, M., Böhne, A., Boila, A., Büscher, H. H., El Taher, A., Indermaur, A., Malinsky, M., Ricci, V., Kahmen, A., Jentoft, S., Salzburger, W. 2020. Drivers and dynamics of a massive adaptive radiation in cichlid fishes. Nature. https://doi.org/10.1038/s41586-020-2930-4
Cayuela, H., Rougemont, Q., Laporte, M., Mérot, C., Normandeau, E., Dorant, Y., Tørresen, O. K., Hoff, S. N. K., Jentoft, S., Sirois, P., Castonguay, M., Jansen, T., Praebel, K., Clément, M., Bernatchez, L. 2020. Shared ancestral polymorphism and chromosomal rearrangements as potential drivers of local adaptation in a marine fish. Molecular Ecology. DOI: 10.1111/mec.15499
Guslund, N. C., Solbakken, M. H., Brieuc, M. S. O., Jentoft, S., Jakobsen, K. S., Qiao, S.-W. 2020. Single cell transcriptome profiling of the Atlantic cod immune cell repertoire lacking the major histocompatibility class II system. Frontiers in Immunology. https://doi.org/10.3389/fimmu.2020.559555
Roth, O., Solbakken, M. H., Tørresen, O. K., Bayer, T., Matschiner, M., Baalsrud, H. T., Hoff, S. N. K., Brieuc, M. S. O., Haase, D., Hanel, R., Reusch, T. B. H., Jentoft, S. 2020. Evolution of male pregnancy associated withremodeling of canonical vertebrate immunity in seahorses and pipefishes. PNAS. https://doi.org/10.1073/pnas.1916251117
Nilsson, P., Solbakken. M. H., Schmid, B. V., Orr, R. J. S., Lv, R., Cui, Y., Song, Y., Zhang, Y., Baalsrud, H. T., Tørresen, O. K., Stenseth, N. Chr., Yang, R., Jakobsen, K. S., Easterday, W. R., Jentoft, S. 2020. The genome of the great gerbil reveals species-specific duplication of an MHCII gene. Genome Biology and Evolution. https://doi.org/10.1093/gbe/evaa008
Riiser, E. S., Haverkamp, T. H. A., Varadharajan, S., Borgan, Ø., Jakobsen, K. S., Jentoft, S., Star, B. 2020. Metagenomic shotgun analyses reveal complex patterns of intra- and interspecific variation in the intestinal microbiomes of codfishes. Applied Environmental Microbiology. DOI: 10.1128/AEM.02788-19
Mittermayer, F. H., Stiasny, M. H., Clemmesen, C., Bayer, T., Puvanendran, V., Chierici, M., Jentoft, S., Reusch, T. B. H. 2019. Transcriptome profiling reveals exposure to predicted end-of-century ocean acidification as a stealth stressor for Atlantic cod larvae. Scientific Reports. https://doi.org/10.1038/s41598-019-52628-1
Mattingsdal, M., Jorde, P. E., Knutsen, H., Jentoft, S., Stenseth, N. C., Sodeland, M., Robalo, J. I., Hansen, M. M., André, C., Gonzalez, E. B. 2019. Demographic history has shaped the strongly differentiated corkwing wrasse populations in Northern Europe. Molecular Ecology. https://doi.org/10.1111/mec.15310
André, C., Barth, J. M. I., Jonsson, P., Jentoft, S., Knutsen, H., Svedäng, H. 2019. Response to comments by Cardinale et al. on "Local cod (Gadus morhua) revealed by egg surveys and population genetic analysis after longstanding depletion on the Swedish Skagerrak coast" by Svedäng et al., (2019). ICES Journal of Marine Science. DO - 10.1093/icesjms/fsz125
Solbakken, M. H., Jentoft, S., Reitan, T., Mikkelsen, H., Jakobsen, K. S., Seppola, M. 2019. Whole transcriptome analysis of the Atlantic cod vaccine response reveals subtle changes in adaptive immunity. Comparative Biochemistry and Physiology - Part D: Genomics and Proteomics. DOI: 10.1016/j.cbd.2019.100597
Weist, P., Schade, F. M., Damerau, M., Barth, J. M. I., Dierking, J., André, C., Petereit, C., Reusch, T., Jentoft, S., Hanel, R., Krumme, U. 2019. Assessing SNP-markers to study population mixing and ecological adaptation in Baltic cod. PLoS ONE. https://doi.org/10.1371/journal.pone.0218127
Riiser, E. S., Haverkamp, T. H. A., Varadharajan, S., Borgan, Ø., Jakobsen, K. S., Jentoft, S., Star, B. 2019. Switching on the light: using metagenomic shotgun sequencing to characterize the intestinal microbiome of Atlantic cod. Environmental Microbiology. DOI: 10.1111/1462-2920.14652
Musilova, Z., Cortesi, F., Matschiner, M., Davies, W. I. L., Patel, J. S., Stieb, S. M., de Busserolles, F., Malmstrøm, M., Tørresen, O. K., Brown, C. J., Mountford, J. K, Hanel, R., Stenkamp, D. L., Jakobsen, K. S., Carleton, K. L., Jentoft, S., Marshall, J., Salzburger, W. 2019. Vision using multiple distinct rod opsins in deep-sea fishes. Science. 364(6440):588-592. DOI: 10.1126/science.aav4632
Gonzalez, E. B., Espeland, S. H., Jentoft, S., Hansen, M. M., Robalo, J. I., Stenseth, N. C., Jorde, P. E. 2019. Interbreeding between local and translocated populations of a cleaner fish in an experimental mesocosm predicts risk of disrupted local adaptation. Ecology and Evolution. https://doi.org/10.1002/ece3.5246
Solbakken, M. H., Jentoft, S., Reitan, T., Mikkelsen, H., Gregers, T. F., Bakke, O., Jakobsen, K. S., Seppola, M. 2019. Disentangling the immune response and host-pathogen interactions in Francisella noatunensisinfected Atlantic cod. Comparative Biochemistry and Physiology - Part D: Genomics and Proteomics. 30: 333-346. https://doi.org/10.1016/j.cbd.2019.04.004
Inkpen, S., Solbakken, M. H., Jentoft, S., Eslamloo, K., Rise, M. 2019. Full characterization and transcript expression profiling of the interferon regulatory factor (IRF) gene family in Atlantic cod (Gadus morhua). Developmental and Comparative Immunology. https://doi.org/10.1016/j.dci.2019.03.015
Barth, J. M. I., Villegas-Ríos, D., Freitas, C., Moland, E., Star, B., André, C., Knutsen, H., Bradbury, I., Dierking, J., Petereit, C., Righton, D., Metcalfe, J., Jakobsen, K. S., M. Olsen, E. M., Jentoft, S. 2019. Disentangling structural genomic and behavioral barriers in a sea of connectivity. Molecular Ecology. https://doi.org/10.1111/mec.15010
Langangen, Ø., Färber, L., Stige, L. C., Diekert, F. K., Barth, J. M. I., Matschiner, M., Berg, P. R., Star, B., Stenseth, N. C., Jentoft, S., Durant, J. M. 2019. Ticket to spawn: Combining economic and genetic data to evaluate the effect of climate and demographic structure on spawning distribution in Atlantic cod. Global Change Biology. https://doi.org/10.1111/gcb.14474
Hoff, S. N. K., Baalsrud, H. T., Tooming-Klunderud, A., Skage, M., Richmond, T., Obernosterer, G., Shirzadi, R., Tørresen, O. K., Jakobsen, K. S., Jentoft, S. 2019. Long-read sequence capture of the hemoglobin gene clusters across codfish species. Molecular Ecology Resources. https://doi.org/10.1111/1755-0998.12955
Svedäng, H., Barth, J. M. I., Svenson, A., Jonsson, P., Jentoft, S., Knutsen, H., André, C. 2018. Local cod (Gadus morhua) revealed by egg trawling and population genetic analysis after longstanding depletion on the Swedish Skagerrak coast. ICES Journal of Marine Science. https://doi.org/10.1093/icesjms/fsy166
Varadharajan, S., Sandve, S. R., Gillard, G. B., Tørresen, O. K., Mulugeta, T. D., Hvidsten, T. R., Lien, S., Vøllestad, L. A., Jentoft, S., Nederbragt, A. J., Jakobsen, K. S. 2018. The grayling genome reveals selection on gene expression regulation after whole genome duplication. Genome Biology and Evolution. https://doi.org/10.1093/gbe/evy201
Machado, A. M., Tørresen, O. K., Kabeya, N., Couto, A., Petersen, B., Felício, M., Campos, P. F., Fonseca, E., Bandarra, N., Lopes‑Marques, M., Ferraz, R., Ruivo, R., Fonseca; M. M., Jentoft, S., Monroig, O., da Fonseca, R., Castro, L. F. C. 2018. “Out of the Can”: A Draft Genome Assembly, Liver Transcriptome, and Nutrigenomics of the European Sardine, Sardina Pilchardus. Genes. 9: 485. doi:10.3390/genes9100485
Riiser, E. S., Haverkamp, T. H. A., Borgan, Ø., Jakobsen, K. S., Jentoft, S., Star, B. 2018. A single Vibrionales16S rRNA oligotype dominates the intestinal microbiome in two geographically separated Atlantic cod populations. Frontiers in Microbiology. https://doi.org/10.3389/fmicb.2018.01561
Jorde, P. E., Kleiven, A. R., Sodeland, M., Olsen, E. M., Ferter, K., Jentoft, S., Knutsen, H. 2018. Who is fishing on what stock: population-of-origin of individual cod (Gadus morhua) in commercial and recreational fisheries. ICES Journal of Marine Science. DOI: 10.1093/icesjms/fsy080
Mattingsdal, M., Jentoft, S., Tørresen, O. K., Knutsen, H., Hansen, M. M., Robalo, J. I., Zagrodzka, Z., André, C., Gonzalez, E. B. 2018. A continuous genome assembly of the corkwing wrasse (Symphodus melops). Genomics. https://doi.org/10.1016/j.ygeno.2018.04.009
Tørresen, O. K., Brieuc, M. S. O., Solbakken. M. H., Sørhus. E., Nederbragt, A. J., Jakobsen. K. S., Meier, S., Edvardsen, R. B. Jentoft, S. 2018. Genomic architecture of haddock (Melanogrammus aeglefinus) shows expansions of innate immune genes and short tandem repeats. BMC Genomics. 19: 240. https://doi.org/10.1186/s12864-018-4616-y
Lie, K. K., Tørresen, O. K., Solbakken, M. H., Rønnestad, I., Tooming-Klunderud, A., Nederbragt, A. J., Jentoft, S., Sæle, Ø. 2018. Loss of stomach, loss of appetite? Sequencing of the ballan wrasse (Labrus bergylta) genome and intestinal transcriptomic profiling illuminate the evolution of loss of stomach function in fish. BMC Genomics.19:186. https://doi.org/10.1186/s12864-018-4570-8
Baalsrud, H. T., Tørresen, O. K., Solbakken, M. H., Salzburger, W., Hanel, R., Jakobsen, K. S., Jentoft, S. 2018. De novo gene evolution of antifreeze glycoproteins in codfishes revealed by whole genome sequence data. Molecular Biology and Evolution. ISSN 0737-4038. 35(3): 593- 606. doi: 10.1093/molbev/msx311
Berg, P. R., Star, B., Pampoulie, C., Bradbury, I. R., Bentzen, P., Hutchings, J. A., Jentoft, S., Jakobsen, K. S. 2017. Inversions play a key role in ecotype divergence of Atlantic cod across the Atlantic Ocean. Heredity. doi: 10.1038/hdy.2017.54
Baalsrud, H. T., Voje, K. L., Tørresen, O. K., Solbakken, M. H., Matschiner, M., Malmstrøm, M., Hanel, R., Salzburger, W., Jakobsen, K. S., Jentoft, S. 2017. Evolution of hemoglobin genes in codfishes influenced by ocean depth. Scientific Reports. 7: 7956. doi: 10.1038/s41598-017-08286-2
Star, B., Boessenkool, S., Agata T. Gondek, A., Elena A. Nikulina, E. A., Hufthammer, A. K., Pampoulie, C., Knutsen, H., André, C., Nistelberger, H. M., Dierking, J., Petereit, C., Heinrich, D., Jakobsen, K. S. Stenseth, N. C., Jentoft, S., Barrett, J. H. 2017. Ancient DNA reveals the Arctic origin of Viking Age cod from Haithabu, Germany. PNAS. 114(34): 9152–9157. doi: 10.1073/pnas.1710186114
Barth, J. M. I., Berg, P. R., Jonsson, P. R., Bonanomi, S., Corell, H., Hemmer-Hansen, J., Jakobsen, K. S., Johannesson, K., Jorde, P. E., Knutsen, H., Moksnes. P.-O., Star, B., Stenseth, N. C., Svedäng, H., Jentoft,S., André, C. 2017. Genome architecture enables local adaptation of Atlantic cod despite high connectivity. Molecular Ecology. 26(17): 4452–4466. DOI: 10.1111/mec.14207
Barth, J.M.I., Damerau, M., Matschiner, M., Jentoft, S., Hanel, R. 2017. Genomic differentiation and demographic histories of Atlantic and Indo-Pacific yellowfin tuna (Thunnus albacares) populations. Genome Biology and Evolution. 9(4): 1084-1098. https://doi.org/10.1093/gbe/evx067
Solbakken, M. H., Voje, K. L., Jakobsen, K. S., Jentoft, S. 2017. Linking species habitat and past palaeoclimatic events to evolution of the teleost innate immune system. Proceedings of the Royal Society B. DOI: 10.1098/rspb.2016.2810
Sørhus, E., Incardona, J. P., Furmanek, T., Goetz, G. W., Scholz, N. L., Meier, S.,Edvardsen, R. B., Jentoft, S. 2017. Novel adverse outcome pathways revealed by chemical genetics in a developing marine fish. eLIFE.DOI: http://dx.doi.org/10.7554/eLife.20707.
Tørresen, O. K., Star, B., Jentoft, S., Reinar, W. B., Grove, H., Miller, J. R., Walenz, B. P., Knight, J., Ekholm, J. M., Peluso, P., Edvardsen, R. B., Tooming-Klunderud, A., Skage, M., Lien, S., Jakobsen, K. S., Nederbragt, A. J. 2017. An improved genome assembly uncovers prolific tandem repeats in Atlantic cod. BMC Genomics, 18:95. DOI: 10.1186/s12864-016-3448-x
Malmstrøm, M., Matschiner, M., Tørresen, O. K., Jakobsen, K. S., Jentoft, S. 2017. Whole genome sequencing data and de novodraft assemblies for 66 teleost species. Scientific Data. doi:10.1038/sdata.2016.132
Solbakken, M.H., Rise, M.L., Jakobsen, K.S., Jentoft, S. 2016. Successive losses of central immune genes characterize the Gadiformes’ alternate immunity. Genome Biology and Evolution. doi: 10.1093/gbe/evw250
Gante, H., Matschiner, M., Malmstrøm, M., Jakobsen, K. S., Jentoft, S., Salzburger, W. 2016. Genomics of speciation and introgression in Princess cichlid fishes from Lake Tanganyika. Molecular Ecology. DOI: 10.1111/mec.13767
Malmstrøm, M., Matschiner, M., Tørresen, O. K., Star, B., Snipen, L. G., Hansen, T. F., Baalsrud, H. T., Nederbragt, A. J., Hanel, R., Salzburger. W., Stenseth, N.C., Jakobsen, K. S., Jentoft, S. 2016. Evolution of the immune system influences speciation rates in teleost fishes. Nature Genetics. 48: 1204–1210. doi:10.1038/ng.3645
Sørhus, E., Incardona, J. P., Karlsen, Ø., Linbo, T., Sørensen, L., Nordtug, T., van der Meeren, T., Thorsen, A., Thorbjørnsen, M., Jentoft, S., Edvardsen, R. B., Meier, S. 2016. Crude oil exposures reveal roles for intracellular calcium cycling in haddock craniofacial and cardiac development. Scientific Reports.6: 31058. DOI: 10.1038/srep31058
Star, B., Tørresen, O. K., Nederbragt, A. J., Jakobsen, K. S., Pampoulie, C., Jentoft, S. 2016. Genomic characterization of the Atlantic cod sex-locus. Scientific Reports.6: 31235. doi: 10.1038/srep31235
Trucchi, E., Facon, B., Gratton, P., Mori, E., Stenseth, N. C., Jentoft, S. 2016. Long live the alien: is high genetic diversity a pivotal aspect of crested porcupine (Hystrix cristata) long-lasting and successful invasion? Molecular Ecology. DOI: 10.1111/mec.13698
Solbakken, M. H., Tørresen, O. K., Nederbragt, A. J., Seppola, M., Gregers, T. F., Jakobsen, K. S., Jentoft, S. 2016. Evolutionary redesign of the Atlantic cod (Gadus morhua L.) Toll-like receptor repertoire by gene losses and expansions. Scientific Reports.6: 25211. doi:10.1038/srep25211
Lien S., B. F. Koop, S. R. Sandve, J. R. Miller, M. P. Kent, T. Nome, T. R. Hvidsten, J. Leong, D. Minkley, A. Zimin, F. Grammes, H. Grove, A. Gjuvsland, B. Walenz, R. A. Hermansen, K. von Schalburg, E. B. Rondeau, A. Di Genova, J. K. A. Samy, J. O. Vik, M. D. Vigeland, L. Caler, U. Grimholt, S. Jentoft, D. I. Våge, P. de Jong, T. Moen, M. Baranski, Y. Palti, D. R. Smith, J. A. Yorke, A. J. Nederbragt, A. Tooming-Klunderud, K. S. Jakobsen, X. Jiang, D. Fan, Y. Hu, D. A. Liberles, R. Vidal, P. Iturra, S. J.M. Jones, I. Jonassen, A. Maass, S. W. Omholt, W. S. Davidson. 2016. The Atlantic salmon genome provides insights into rediploidization. Nature. 533: 200–205. doi:10.1038/nature17164
Star, B., Hansen, M. H. S., Skage, M., Bradbury, I. R., Godiksen, J. A., Kjesbu, O. S., Jentoft, S. 2016. High endogenous levels of microsatellite DNA promote self-priming during next generation sequencing library creation of ancient DNA. STAR: Science & Technology of Archaeological Research, 2(1): 36-45. DOI: 10.1080/20548923.2016.1160594
Sodeland, M., Jorde, P. E., Lien, S., Jentoft, S., Berg, P. R., Grove, H., Kent, M. P., Arnyasi, M., Esben Olsen, E. M., Knutsen, H. 2016. Islands of divergence' in the Atlantic cod genome represent polymorphic chromosomal rearrangements. Genome Biology and Evolution. doi:10.1093/gbe/evw057
Berg, P. R., Star, B., Pampoulie, C., Sodeland, M., Barth, J.M. I., Knutsen, H., Jakobsen, K. S., Jentoft, S. 2016. Three chromosomal rearrangements promote genomic divergence between migratory and stationary ecotypes of Atlantic cod. Scientific Reports. 6: 23246. doi:10.1038/srep23246
Sørhus E., Incardona, J., Furmanek, T., Jentoft, S., Meier, S., Edvardsen, R. 2016. Developmental transcriptomics in Atlantic haddock: Illuminating pattern formation and organogenesis in non-model vertebrates.Developmental Biology. doi:10.1016/j.ydbio.2016.02.012
Berg, P.R., Jentoft, S., Star, B., Ring, K.H., Knutsen, H., Lien, S., Jakobsen, K.S., André, C. 2015. Adaptation to low salinity promotes genomic divergence in Atlantic cod (Gadus morhuaL.). Genome Biology and Evolution.doi: 10.1093/gbe/evv093
Sørhus, E., Edvardsen, R. B., Karlsen, Ø., Nordtug, T., van der Meeren, T., Thorsen, A., Harman, C., Jentoft, S., Meier, S. 2015. Unexpected interaction with dispersed crude oil droplets drives severe toxicity in Atlantic haddock embryos. PLoS ONE. doi: 10.1371/journal.pone.0124376
Andersen, Ø., Johnsen, De Rosa, M. C., Præbel, K., H., Stjelja, S., Kirubakaran, T. G., Pirolli, D., Jentoft, S., Fevolden, S. E. 2015. Evolutionary history and adaptive significance of the polymorphic Pan I in migratory and stationary populations of Atlantic cod (Gadus morhua). Marine Genomics. doi:10.1016/j.margen.2015.03.009
Pampoulie, C., Skirnisdottir, S., Star, B., Jentoft, S., Jónsdóttir, I. G., Hjörleifsson, E., Thorsteinsson, V., Pálsson, O. K., Berg, P. R., Andersen, Ø., Magnusdottir, S., Helyar, S. J., Daníelsdóttir, A. K. 2015. Rhodopsin gene polymorphism associated with divergent light environments in Atlantic cod. Behavior Genetics, 45(2): 236-244.
Cortesi, F., Musilová, Z., Stieb, S.M., Hart, N.S., Siebeck, U.E., Malmstrøm, M., Tørresen, O.K., Jentoft, S., Cheney, K.L., Marshall, N.J., Carleton, K.L., Salzburger, W. 2015. Ancestral duplications and highly dynamic opsin gene evolution in percomorph fishes. PNAS. 112(5): 1493-1498.
Star, B., Nederbragt, A. J., Hansen, M., Skage, M., Gilfillan, G., Bradbury, I., Pampoulie, C., Stenseth, N. C., Jakobsen, K. S., Jentoft, S. 2014. Palindromic sequence artifacts generated during Next Generation Sequencing library preparation from historic and ancient DNA. PLoS ONE. doi: 10.1371/journal.pone.0089676
Andersen, Ø., De Rosa, M. C., Yadav, P., Pirolli, D., Fernandes, J. M. O., Berg, P. R., Jentoft, S., Andrè, C. 2014. The conserved Phe GH5 of importance for hemoglobin intersubunit contact is mutated in gadoid fish. BMC Evolutionary Biology. doi: 10.1186/1471-2148-14-54.
Star, B., Haverkamp, T. H. A., Jentoft, S., Jakobsen, K. S. 2013. Next generation sequencing shows high variation of the intestinal microbial species composition in Atlantic cod caught at a single location. BMC Microbiology, 13:248. doi:10.1186/1471-2180-13-248.
Malmstrøm, M., Jentoft, S., Gregers, T., Jakobsen, K. S. 2013. Unraveling the evolution of the Atlantic cod’s (Gadus morhuaL.) alternative immune strategy. PLoS ONE, 8(9): e74004. doi:10.1371/journal.pone.0074004
Star, B., and Jentoft, S. 2012. Why does the immune system of Atlantic cod lack MHC II? BioEssays, 34(8): 648-651.
Star, B., Nederbragt, A. J., Jentoft, S., Grimholt, U., Malmstrøm, M., Gregers, T. F., Rounge, T. B., Paulsen, J., Solbakken, M. H., Sharma, A., Wetten, O. F., Lanzén A., Winer, R., Knight, J., Vogel, J.-H., Aken, B., Andersen, Ø., Lagesen, K., Tooming-Klunderud, A., Edvardsen, R. B., Kirubakaran G. T., Espelund, M., Nepal, C., Previti, C., Karlsen, B. O., Moum, T., Skage, M., Berg, P. R., Gjøen, T., Kuhl, H., Thorsen, J., Malde, K., Reinhardt, R., Du, L., Johansen, S. D., Searle, S., Lien, S., Nilsen, F., Jonassen, I., Omholt, S. W., Stenseth, N. C., Jakobsen, K. S. 2011. The genome sequence of Atlantic cod reveals a unique immune system. Nature, 477(7363): 207-210.
Jentoft, S., Øxnevad, S., Aastveit, A. H., Andersen, Ø. 2006. Effects of tank wall color and up-welling water flow on growth and survival of Eurasian perch larvae (Perca fluviatilis). J. World Aquacult. Soc.37: 313-317.
Jentoft, S., Aastveit, A. H., Torjesen, P. A., Andersen, Ø. 2005. Effects of stress on growth, cortisol and glucose levels in non-domesticated Eurasian perch (Perca fluviatilis) and domesticated rainbow trout (Oncorhynchus mykiss). Comp. Biochem. Physiol. Part A, 141: 353-358.
Jentoft, S., Topp, N., Seeliger, M., Malison, J. A., Barry, T. P., Held, J. A., Roberts, S., Goetz, F. 2005. Lack of growth enhancement by exogenous growth hormone treatment in yellow perch (Perca flavescens) in four separate experiments. Aquaculture, 250: 471-479.
Jentoft, S., Aastveit, A. H., Andersen, Ø. 2004. Molecular cloning and expression of insulin-like growth factor-I (IGF-I) in Eurasian perch (Perca fluviatilis): lack of responsiveness to growth hormone treatment. Fish Physiol. Biochem. 30: 67-76.
Jentoft, S. 2004. Growth regulation and stress responsiveness in juvenile Eurasian perch (Perca fluviatilis) and yellow perch (P. flavescens). Doctor Scientiarum Thesis 36, Universitetet for miljø- og biovitenskap.
Jentoft, S., Held, J. A., Malison, J. A., Barry, T. P. 2002. Ontogeny of the cortisol stress response in yellow perch (Perca flavescens). Fish Physiol. Biochem. 26: 371-378.
Dannevig, B. H., Olesen, N. J., Jentoft, S., Kvellestad, A., Taksdal, T., Håstein,T. 2001. The first isolation of rhabdovirus from perch (Perca fluviatilis) in Norway. Bull. Eur. Ass. Fish Pathol. 21 (5): 186-194.