Archaeogenomics group

In our group we’re interested in using (ancient) DNA as a tool to answer a wide range of questions in ecology, evolution, and archaeology.

    Bastiaan, Oliver, Agata, Giada and Anneke in full gear during an aDNA lab cleaning day.
    Bastiaan, Oliver, Agata, Giada and Anneke in full gear during an aDNA lab cleaning day.

    About the group

    We study spatial and temporal changes in populations and species over hundreds to thousands of years, with a specific focus on human induced change and historic trade patterns. We primarily work on animals – ranging from fish to birds to mammals – and also have some projects focusing on plants.

    Our methods focus on whole genome (shotgun) resequencing, metabarcoding and occasionally we’ll use reduced representation (hybridization capture) sequencing, or single marker PCR. Our work greatly benefits from the excellent infrastructure and expertise we have available locally, including the Norwegian Sequencing Centre, the CEES labs and the ancient DNA laboratory. We really enjoy collaborating closely with people with specialties in other disciplines, including archaeologists and paleontologists.

    We currently have several ongoing projects investigating dispersal and adaptation of biodiversity through human movement, trade and domestication in Viking Age and medieval northern Europe. In addition, we work on the population genomics of Atlantic puffins and use sedimentary ancient DNA to reconstruct past environments. We are further involved in collaborative projects on ancient dispersal and adaptation of New Zealand snapper, common beans and barley.


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    Latest news

    A new paper by Giada is now out

    Our new paper on aDNA preservation in fish bones is now out! A fantastic achievement, congratulations Giada!


    New project funded!

    16/12/2020
    Whoop whoop, new project funded by the Research Council of Norway! 12 million NOK for "EvoCave: Investigating 122 000 years of high-latitude faunal diversity using palaeozoology, archaeology, palaeoecology and ancient DNA". We'll be hiring a postdoc and a PhD student next year!

    New paper on byrozoan museum specimens

    New paper exploring the potential for DNA analyses of bryozoan specimens from museum collections


    First paper from Anneke her PhD published

    Congratulations to Anneke, check out her new paper published in Environmental DNA in whcih she uses eDNA to study dietary niche overlap.


    Preprint of paper non puffin population genomics online

    A preprint of our puffin population genomics paper is now available on bioRxiv. Congratulations to Oliver for reaching this great milestone, and what an excellent way to start his parental leave! Now fingers crossed for positive reviews :)

     


    Collaborating on ERC Synergy Grant 4-OCEANS!

    We're excited that the ERC Synergy Grant 4-OCEANS with PIs James Barrett, Poul Holm, Cristina Brito and Francis Ludlow has been funded! Archaeogenomics collaborates on this grant and we will have several positions (Labtech, PhD & Postdoc) that will be associated with this ambitious project. Stay tuned!


    New paper from Oliver!

    28/10/2020

    Congratulations to Oliver and the rest of the team with their latest paper on plague published in PNAS!

    A genomic and historical synthesis of plague in 18th century Eurasia


    New paper from Giada!

    06/10/2020

    Congratulations to Giada for publishing another one of her PhD papers!

    Variola virus genome sequenced from an eighteenth-century museum specimen supports the recent origin of smallpox

    Zoom lab meetings and summer

    03/07/2020

    Aye we've been really bad in keeping the site updated! But no fear we are still going strong :-) Everyone got used to working from home and in the past 2 months we have been slowly allowed back into the labs and even into the offices. Just as the rest of the world we have become experts in lab zoom meetings, but thankfully now also have occasional non-digital meetings again. In the mean time data is being produced and analysed, papers are being written, submitted and revised, grants applied for, etc. Have a nice summer everyone!

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    New paper published

    23/01/2020

    Even's last paper of his PhD just came out in Applied and Environmental Microbiology. Congratulations! We use metagenomic shotgun sequencing to look at intra- and interspecific variation of the intestinal microbiome in a range of gadoid species and ecotypes.


    New papers published

    06/01/2020

    Our new paper on the potential impacts and societal consequences of the historic walrus ivory trade from Norse Greenland just came online. A really neat collaborative effort with James Barrett from the  University of Cambridge.

    And also another paper to which our PhD student Oliver contributed, on the metagenomics of dental calculus in ancient Egyptian baboons.


    Welcome to Lane and Emma

    18/12/2019

    This month, we can welcome both Lane Atmore and Emma Falkeid to our group! Lane obtained her MSc from the University of Cambridge, working on adaptation and selection in  human populations using whole genome sequence data. She will work on her PhD here, using ancient DNA from Atlantic herring samples to investigate trade and human impacts as part of our SEACHANGES ITN network.  Emma has just finished her Bachelor degree, and will be working on her MSc, studying ancient Atlantic tuna samples (also together with Lane) in a collaborative project with Svein Nielsen from the Museum of Cultural History.


    Welcome to Lulu

    30/10/2019

    A BIG welcome to Lourdes Garcia!  Lourdes recently started with us to do her PhD. Originally from Mexico, Lourdes obtained her MSc degree from Lund University, where she studied population structure in eelgrasses. She will be working on the analyses of ancient DNA from Atlantic cod, and is part of our SEACHANGES ITN network.


     

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    Published Mar. 21, 2018 11:46 AM - Last modified Jan. 11, 2021 9:50 AM