Lex Nederbragt
Senior Lecturer
-
Centre for Ecological and Evolutionary Synthesis
Senior Lecturer - Research Group for Biomedical Informatics
Norwegian version of this page
Phone
+47 22844132
Room
3403
Username
Visiting address
Kristine Bonnevieshus
Blindernveien 31
Postal address
Postboks 1066 Blindern
0316 Oslo
For my personal presentation go to the CEES webpages here
Publications
- Grytten, Ivar; Rand, Knut Dagestad; Nederbragt, Alexander Johan & Sandve, Geir Kjetil (2020). Assessing graph-based read mappers against a baseline approach highlights strengths and weaknesses of current methods. BMC Genomics. ISSN 1471-2164. 21 . doi: 10.1186/s12864-020-6685-y Full text in Research Archive.
- Khelik, Ksenia; Sandve, Geir Kjetil; Nederbragt, Alexander Johan & Rognes, Torbjørn (2020). NucBreak: location of structural errors in a genome assembly by using paired-end Illumina reads. BMC Bioinformatics. ISSN 1471-2105. 21(1) . doi: 10.1186/s12859-020-3414-0 Full text in Research Archive.
- Grytten, Ivar; Rand, Knut Dagestad; Nederbragt, Alexander Johan; Storvik, Geir Olve; Glad, Ingrid Kristine & Sandve, Geir Kjetil (2019). Graph Peak Caller: Calling ChIP-seq peaks on graph-based reference genomes. PLoS Computational Biology. ISSN 1553-734X. 15(2), s 1- 13 . doi: 10.1371/journal.pcbi.1006731 Full text in Research Archive.
- Varadharajan, Srinidhi; Rastas, Pasi; Löytynoja, Ari; Matschiner, Michael; Calboli, Federico C. F.; Guo, Baocheng; Nederbragt, Alexander Johan; Jakobsen, Kjetill Sigurd & Merilä, Juha (2019). A High-Quality Assembly of the Nine-Spined Stickleback (Pungitius pungitius) Genome. Genome Biology and Evolution (GBE). ISSN 1759-6653. 11(11), s 3291- 3308 . doi: 10.1093/gbe/evz240 Full text in Research Archive.
- Jørgensen, Tor Erik; Karlsen, Bård Ove; Emblem, Åse; Breines, Ragna; Andreassen, morten; Rounge, Trine Ballestad; Nederbragt, Alexander Johan; Jakobsen, Kjetill Sigurd; Nymark, Marianne; Ursvik, anita; Coucheron, Dag H; Jakt, Lars Martin; Nordeide, Jarle Tryti; Moum, Truls Borg & Johansen, Steinar Daae (2018). Mitochondrial genome variation of Atlantic cod. BMC Research Notes. ISSN 1756-0500. 11:397, s 1- 7 . doi: 10.1186/s13104-018-3506-3 Full text in Research Archive.
- Lie, Kai Kristoffer; Tørresen, Ole K.; Solbakken, Monica Hongrø; Rønnestad, Ivar; Tooming-Klunderud, Ave; Nederbragt, Alexander Johan; Jentoft, Sissel & Sæle, Øystein (2018). Loss of stomach, loss of appetite? Sequencing of the ballan wrasse (Labrus bergylta) genome and intestinal transcriptomic profiling illuminate the evolution of loss of stomach function in fish. BMC Genomics. ISSN 1471-2164. 19(186), s 1- 17 . doi: 10.1186/s12864-018-4570-8 Full text in Research Archive.
- Nederbragt, Alexander Johan (2020). Ten quick tips for teaching with participatory live coding. PLoS Computational Biology. ISSN 1553-734X. . doi: 10.1371/JOURNAL.PCBI.1008090
- Nederbragt, Alexander Johan; Harris, Rayna Michelle; Hill, Alison Presmanes & Wilson, Greg (2020). Ten quick tips for teaching with participatory live coding. PLoS Computational Biology. ISSN 1553-734X. 16(9), s 1- 7 . doi: 10.1371/journal.pcbi.1008090 Full text in Research Archive.
- Fyhn, Marianne; Malthe-Sørenssen, Anders; Mørken, Knut Martin; Nederbragt, Alexander Johan; Odden, Tor Ole & Sundnes, Joakim (2019). Beregningsorientering og utdanningsutvikling.
- Nederbragt, Alexander Johan (2019). Learning from the Carpentries.
Published Nov. 3, 2010 3:30 PM
- Last modified Nov. 27, 2019 3:09 PM