Ongoing and completed master's projects

Title Published Student(s) Supervisor(s)
A machine learning approach for classification of prostate cancer from RNA data Sep. 25, 2018
Algorithm for droplet digital PCR data classification Sep. 26, 2017
Algorithms for large-scale analysis of genomic data May 24, 2013
Algorithms for rediscovery of cancer mutations in DNA sequencing data from blood plasma Sep. 20, 2017
Analysing big simulation data on the fly Sep. 20, 2018
Analysis pipeline for genome methylation experiments July 2, 2018
API for sequence alignment based on effective parallelisation Aug. 16, 2013
Benchmarking of software for mapping short sequences to a reference genome Aug. 16, 2013
Benchmarking of variant calling and mutation detection tools Aug. 19, 2013
Benchmarking system for genome assembly and/or variant calling software Oct. 25, 2012
Compressing short reads from high-throughput DNA sequencing June 6, 2011
Computational detection of chimeric sequences Sep. 28, 2015
Computational prediction of ribosomal RNAs Oct. 2, 2014
Contributing to large open-source software libraries June 6, 2011
Creating a highly dynamic benchmarking system June 6, 2011
Developing an app that allows researchers to follow the progress of jobs running on a high performance computing facility Sep. 16, 2013
Developing benchmarks for genome analysis June 4, 2013
Evaluering av gensøkingsmetoder Mar. 14, 2011
Extraction of biomedical knowledge from the ClinicalTrials database Oct. 19, 2011
Fighting the communication overhead in hybrid CPU-GPU computing Oct. 3, 2014
Full-scale 3D simulations of the heart as a "binary cube" Sep. 14, 2014
Genetic distances - methods for comparing whole genome sequences Oct. 14, 2015
Hacking the Cancer Genome Aug. 10, 2012
Highly dynamic clustering June 6, 2011
Hybrid CPU-GPU computing for simulating calcium handling in the heart Sep. 14, 2014