Trine Ballestad Rounge

Bilde av Trine Ballestad Rounge
English version of this page
Telefon +47 22844948
Mobiltelefon +4799604304
Brukernavn
Besøksadresse Sem Sælands vei 3 Farmasibygningen 0371 Oslo
Postadresse Postboks 1068 Blindern 0316 Oslo

Trine B Rounges forskningsinteresser er innen genomikk, epigenomikk, transkriptomikk, mikrobiomforskning og utvikling av kreftbiomarkører. Hennes forskningsmål er å identifisere DNA- og/eller RNA-mønstre som avslører kreftprogresjon på et tidlig stadium. Trine har bred bakgrunn innen bioinformatikk og molekylærbiologi. Hennes ekspertise er i å designe og etablere neste generasjons sekvenseringsprotokoller og påfølgende bioinformatikk.

Trine er PI for prosjektet CRCbiome finansiert av Kreftforeningen og HSØ, som har som mål å identifisere biomarkører i tarmmikrobiomet for bruk i screening av tykktarmskreft. I samarbeid med Paula Berstad leder de et arbeid for å belyse samspillet mellom mikrobiomet, livsstil, kosthold og medisinbruk på utvikling av tykktarmskreft.

Sammen med Hilde Langseth er Trine PI i et stort prosjekt som tar sikte på å identifisere sirkulerende RNA-kreftbiomarkører ved hjelp av serumprøver, finansiert av Norges Forskningsråd - JanusRNA. Forskergruppen har utviklet en småRNA-sekvenseringsprotokoll skreddersydd for prøver med lavt RNA-utbytte og gjort omfattende karakterisering av RNA-profiler i friske individer og livstil variabler. I dette prosjektet har de profilert pre-diagnostiske prøver fra syv ulike krefttyper Totalt er mer enn 4000 prøver analysert. Bioinformatiske, regresjons- og maskinlæringsmetoder brukes. Hun jobber også med prosjekter knyttet til DNA-metylering i tre ulike prosjekter.

Hun er også en av lederne i en tverrinstitusjonell gruppe som jobber med utvikling av metoder og analyser av genomiske endringer og variasjon ved vedvarende infeksjon av Human Papillomavirus, med mål om å finne ut om akkumuleringen av disse endringene kan brukes i livmorhalskreftscreening.

Publikasjoner

  • Istvan, Paula; Birkeland, Einar Elvbakken; Avershina, Ekaterina; Kværner, Ane Sørlie; Bemanian, Vahid & Pardini, Barbara [Vis alle 11 forfattere av denne artikkelen] (2024). Exploring the gut DNA virome in fecal immunochemical test stool samples reveals associations with lifestyle in a large population-based study. Nature Communications. ISSN 2041-1723. 15, s. 1–12. doi: 10.1038/s41467-024-46033-0. Fulltekst i vitenarkiv
  • Birkeland, Einar Elvbakken; Ferrero, Giulio; Pardini, Barbara; Umu, Sinan Ugur; Tarallo, Sonia & Bulfamante, Sara [Vis alle 10 forfattere av denne artikkelen] (2023). Profiling small RNAs in fecal immunochemical tests: is it possible? Molecular Cancer. ISSN 1476-4598. 22:161(1), s. 1–7. doi: 10.1186/s12943-023-01869-w. Fulltekst i vitenarkiv
  • Umu, Sinan Ugur; Paynter, Vanessa Molin; Trondsen, Håvard; Buschmann, Tilo; Rounge, Trine Ballestad & Peterson, Kevin J. [Vis alle 7 forfattere av denne artikkelen] (2023). Accurate microRNA annotation of animal genomes using trained covariance models of curated microRNA complements in MirMachine. Cell Genomics. 3:100348(8), s. 1–15. doi: 10.1016/j.xgen.2023.100348. Fulltekst i vitenarkiv
  • Rumbavicius, Ignas; Rounge, Trine Ballestad & Rognes, Torbjørn (2023). HoCoRT: host contamination removal tool. BMC Bioinformatics. ISSN 1471-2105. 24(1). doi: 10.1186/s12859-023-05492-w. Fulltekst i vitenarkiv
  • Kværner, Ane Sørlie; Andersen, Astrid Riseth; Henriksen, Hege Berg; Knudsen, Markus Dines; Johansen, Anne Marte Wetting & Hjartåker, Anette [Vis alle 13 forfattere av denne artikkelen] (2023). Associations of the 2018 World Cancer Research Fund/American Institute of Cancer Research (WCRF/AICR) cancer prevention recommendations with stages of colorectal carcinogenesis. Cancer Medicine. ISSN 2045-7634. 12(13), s. 14806–14819. doi: 10.1002/cam4.6119. Fulltekst i vitenarkiv
  • Bucher-Johannessen, Cecilie; Birkeland, Einar Elvbakken; Vinberg, Elina; Bemanian, Vahid; Hoff, Geir Svein & Berstad, Paula [Vis alle 7 forfattere av denne artikkelen] (2023). Long-term follow-up of colorectal cancer screening attendees identifies differences in Phascolarctobacterium spp. using 16S rRNA and metagenome sequencing. Frontiers in Oncology. ISSN 2234-943X. 13. doi: 10.3389/fonc.2023.1183039. Fulltekst i vitenarkiv
  • Løvestad, Alexander; Stosic, Milan; Costanzi, Jean-Marc; Christiansen, Irene Kraus; Aamot, Hege Vangstein & Ambur, Ole Herman [Vis alle 7 forfattere av denne artikkelen] (2023). TaME-seq2: tagmentation-assisted multiplex PCR enrichment sequencing for viral genomic profiling. Virology Journal. ISSN 1743-422X. 20, s. 1–11. doi: 10.1186/s12985-023-02002-5. Fulltekst i vitenarkiv
  • Abu-Halima, Masood; Keller, Andreas; Becker, Lea Simone; Fischer, Ulrike; Engel, Annika & Ludwig, Nicole [Vis alle 11 forfattere av denne artikkelen] (2023). Dynamic and static circulating cancer microRNA biomarkers – a validation study. RNA Biology. ISSN 1547-6286. 20(1), s. 1–9. doi: 10.1080/15476286.2022.2154470. Fulltekst i vitenarkiv
  • Senthakumaran, Thulasika; Moen, Aina Elisabeth Fossum; Tannæs, Tone Møller; Endres, Alexander; Brackmann, Stephan Andreas & Rounge, Trine Ballestad [Vis alle 8 forfattere av denne artikkelen] (2023). Microbial dynamics with CRC progression: a study of the mucosal microbiota at multiple sites in cancers, adenomatous polyps, and healthy controls. European Journal of Clinical Microbiology and Infectious Diseases. ISSN 0934-9723. 42, s. 305–322. doi: 10.1007/s10096-023-04551-7. Fulltekst i vitenarkiv
  • Løvestad, Alexander; Repesa, Adina; Costanzi, Jean-Marc; Lagström, Sonja ; Christiansen, Irene Kraus & Rounge, Trine Ballestad [Vis alle 7 forfattere av denne artikkelen] (2022). Differences in integration frequencies and APOBEC3 profiles of five high-risk HPV types adheres to phylogeny. Tumour Virus Research. ISSN 2666-6790. 14. doi: 10.1016/j.tvr.2022.200247. Fulltekst i vitenarkiv
  • Kværner, Ane Sørlie; Birkeland, Einar Elvbakken; Vinberg, Elina; Hoff, Geir; Hjartåker, Anette & Rounge, Trine Ballestad [Vis alle 7 forfattere av denne artikkelen] (2022). Associations of red and processed meat intake with screen-detected colorectal lesions. British Journal of Nutrition. ISSN 0007-1145. s. 1–36. doi: 10.1017/S0007114522002860. Fulltekst i vitenarkiv
  • Burton, Joshua; Wojewodzic, Marcin Wlodzimierz; Rounge, Trine Ballestad & Haugen, Trine B. (2022). A Role of the TEX101 Interactome in the Common Aetiology Behind Male Subfertility and Testicular Germ Cell Tumor. Frontiers in Oncology. ISSN 2234-943X. 12. doi: 10.3389/fonc.2022.892043. Fulltekst i vitenarkiv
  • Umu, Sinan Ugur; Langseth, Hilde; Zuber, Verena; Helland, Åslaug; Lyle, Robert & Rounge, Trine Ballestad (2022). Serum RNAs can predict lung cancer up to 10 years prior to diagnosis. eLIFE. ISSN 2050-084X. 11. doi: 10.7554/ELIFE.71035. Fulltekst i vitenarkiv
  • Blandino, Alice; Scherer, Dominique; Rounge, Trine Ballestad; Umu, Sinan Ugur; Boekstegers, Felix & Barahona Ponce, Carol [Vis alle 41 forfattere av denne artikkelen] (2022). Identification of Circulating lncRNAs Associated with Gallbladder Cancer Risk by Tissue-Based Preselection, Cis-eQTL Validation, and Analysis of Association with Genotype-Based Expression. Cancers. ISSN 2072-6694. 14(3). doi: 10.3390/cancers14030634. Fulltekst i vitenarkiv
  • Engberg, Elina; Raju, Sajan; Figueiredo, Rejane A.O.; Weiderpass, Elisabete; Rounge, Trine Ballestad & Viljakainen, Heli (2021). Saliva microbiota differs between children with low and high sedentary screen times. Human Microbiome Journal. ISSN 2452-2317. 20. doi: 10.1016/j.humic.2021.100080. Fulltekst i vitenarkiv
  • Lagström, Sonja ; Løvestad, Alexander; Umu, Sinan Uğur; Ambur, Ole Herman; Nygård, Mari & Rounge, Trine Ballestad [Vis alle 7 forfattere av denne artikkelen] (2021). HPV16 and HPV18 type-specific APOBEC3 and integration profiles in different diagnostic categories of cervical samples. Tumour Virus Research. ISSN 2666-6790. 12. doi: 10.1016/j.tvr.2021.200221. Fulltekst i vitenarkiv
  • Wojewodzic, Marcin; Leithaug, Magnus; Lauritzen, Marianne; Lyle, Robert; Haglund, Sofia & Rubin, Carl-Johan [Vis alle 9 forfattere av denne artikkelen] (2021). Ultralow amounts of DNA from long-term archived serum samples produce high-quality methylomes. Clinical Epigenetics. ISSN 1868-7075. 13. doi: 10.1186/s13148-021-01097-3. Fulltekst i vitenarkiv
  • Kværner, Ane Sørlie; Birkeland, Einar Elvbakken; Bucher-Johannessen, Cecilie; Vinberg, Elina; Nordby, Jan Inge & Kangas, Harri [Vis alle 27 forfattere av denne artikkelen] (2021). The CRCbiome study: a large prospective cohort study examining the role of lifestyle and the gut microbiome in colorectal cancer screening participants. BMC Cancer. ISSN 1471-2407. 21. doi: 10.1186/s12885-021-08640-8. Fulltekst i vitenarkiv
  • Mandishora, Racheal S. Dube; Rounge, Trine Ballestad; Fitzpatrick, Megan; Christiansen, Hanne Irene Kraus; Ambur, Ole Herman & Lagström, Sonja [Vis alle 10 forfattere av denne artikkelen] (2021). Self-collected and clinician-collected anal swabs show modest agreement for HPV genotyping. PLOS ONE. ISSN 1932-6203. 16(4). doi: 10.1371/journal.pone.0250426. Fulltekst i vitenarkiv
  • Keller, Andreas; Fehlmann, Tobias; Backes, Christina; Kern, Fabian; Gislefoss, Randi Elin & Langseth, Hilde [Vis alle 9 forfattere av denne artikkelen] (2020). Competitive learning suggests circulating miRNA profiles for cancers decades prior to diagnosis. RNA Biology. ISSN 1547-6286. 17(10), s. 1416–1426. doi: 10.1080/15476286.2020.1771945.
  • Viljakainen, Jannina; Raju, Sajan C.; Viljakainen, Heli; Figueiredo, Rejane Augusta de Oliveira; Roos, Eva & Weiderpass, Elisabete [Vis alle 7 forfattere av denne artikkelen] (2020). Meal Regularity Plays a Role in Shaping the Saliva Microbiota. Frontiers in Microbiology. ISSN 1664-302X. 11. doi: 10.3389/fmicb.2020.00757. Fulltekst i vitenarkiv
  • Raju, Sajan C.; Viljakainen, Heli; Figueiredo, Rejane A.O.; Neuvonen, Pertti J.; Eriksson, Johan G. & Weiderpass, Elisabete [Vis alle 7 forfattere av denne artikkelen] (2020). Antimicrobial drug use in the first decade of life influences saliva microbiota diversity and composition. Microbiome. ISSN 2049-2618. 8, s. 1–13. doi: 10.1186/s40168-020-00893-y.
  • Figueiredo, Rejane Augusta de Oliveira; Kajantie, Eero; Neuvonen, Pertti J.; Rounge, Trine Ballestad; Weiderpass, Elisabete & Viljakainen, Heli (2020). Lifetime antimicrobial use is associated with weight status in early adolescence—A register-based cohort study. Pediatric Obesity. ISSN 2047-6302. s. 1–10. doi: 10.1111/ijpo.12727.
  • Brägelmann, Johannes; Ponce, Carol Barahona; Marcelain, Katherine; Roessler, Stephanie; Goeppert, Benjamin & Ivan, Gallegos [Vis alle 23 forfattere av denne artikkelen] (2020). Epigenome‐wide analysis of methylation changes in the sequence of gallstone disease, dysplasia, and gallbladder cancer . Hepatology. ISSN 0270-9139. doi: 10.1002/hep.31585.
  • Scherer, Dominique; López, Marcela Dávila; Goeppert, Benjamin; Abrahamsson, Sanna; Silos, Rosa González & Nova, Igor [Vis alle 13 forfattere av denne artikkelen] (2020). RNA Sequencing of Hepatobiliary Cancer Cell Lines: Data and Applications to Mutational and Transcriptomic Profiling. Cancers. ISSN 2072-6694. 12(9). doi: 10.3390/cancers12092510. Fulltekst i vitenarkiv
  • Burton, Joshua; Umu, Sinan Uğur; Langseth, Hilde; Grotmol, Tom; Grimsrud, Tom Kristian & Haugen, Trine B. [Vis alle 7 forfattere av denne artikkelen] (2020). Serum RNA profiling in the 10-year period prior to diagnosis of testicular germ cell tumour. Frontiers in Oncology. ISSN 2234-943X. 10, s. 1–13. doi: 10.3389/fonc.2020.574977. Fulltekst i vitenarkiv
  • Viljakainen, Heli; Dahlström, Emma; Figueiredo, Rejane; Sandholm, Niina; Rounge, Trine Ballestad & Weiderpass, Elisabete (2019). Genetic risk score predicts risk for overweight and obesity in Finnish preadolescents. Clinical Obesity. ISSN 1758-8103. 9(6). doi: 10.1111/cob.12342.
  • Engberg, Elina; Figueiredo, Rejane Augusta de Oliveira; Rounge, Trine Ballestad; Weiderpass, Elisabete & Viljakainen, Heli (2019). Heavy Screen Use on Weekends in Childhood Predicts Increased Body Mass Index in Adolescence: A Three-Year Follow-Up Study. Journal of Adolescent Health. ISSN 1054-139X. s. 1–8. doi: 10.1016/j.jadohealth.2019.09.002.
  • Umu, Sinan Uğur; Langseth, Hilde; Keller, Andreas; Meese, Eckart; Helland, Åslaug & Lyle, Robert [Vis alle 7 forfattere av denne artikkelen] (2019). A 10-year prediagnostic follow-up study shows that serum RNA signals are highly dynamic in lung carcinogenesis. Molecular Oncology. ISSN 1574-7891. 14(2), s. 235–247. doi: 10.1002/1878-0261.12620.
  • Bucher-Johannessen, Cecilie; Page, Christian Magnus; Haugen, Trine B.; Wojewodzic, Marcin; Fosså, Sophie Dorothea & Grotmol, Tom [Vis alle 8 forfattere av denne artikkelen] (2019). Cisplatin treatment of testicular cancer patients introduces long-term changes in the epigenome. Clinical Epigenetics. ISSN 1868-7075. 11:179, s. 1–13. doi: 10.1186/s13148-019-0764-4. Fulltekst i vitenarkiv
  • Rounge, Trine Ballestad; Lauritzen, Marianne; Erlandsen, Sten Even; Langseth, Hilde; Holmen, Oddgeir Lingaas & Gislefoss, Randi Elin (2019). Ultralow amounts of DNA from long-term archived serum samples produce quality genotypes. European Journal of Human Genetics. ISSN 1018-4813. doi: 10.1038/s41431-019-0543-x.
  • Engberg, Elina; Figueiredo, Rejane Augusta de Oliveira; Rounge, Trine Ballestad; Weiderpass, Elisabete & Viljakainen, Heli (2019). Heavy screen users are the heaviest among 10,000 children. Scientific Reports. ISSN 2045-2322. 9(1). doi: 10.1038/s41598-019-46971-6.
  • Raju, Sajan C.; Lagström, Sonja ; Ellonen, Pekka; de Vos, Willem M.; Eriksson, Johan G. & Weiderpass, Elisabete [Vis alle 7 forfattere av denne artikkelen] (2019). Gender-specific associations between saliva microbiota and body size. Frontiers in Microbiology. ISSN 1664-302X. 10:767, s. 1–10. doi: 10.3389/fmicb.2019.00767. Fulltekst i vitenarkiv
  • Lagström, Sonja ; van der Weele, Pascal; Rounge, Trine Ballestad; Christiansen, Irene Kraus; King, Audrey & Ambur, Ole Herman (2019). HPV16 whole genome minority variants in persistent infections from young Dutch women. Journal of Clinical Virology. ISSN 1386-6532. 119, s. 24–30. doi: 10.1016/j.jcv.2019.08.003. Fulltekst i vitenarkiv
  • Viljakainen, Jannina; Figueiredo, Rejane Augusta de Oliveira; Viljakainen, Heli; Roos, Eva; Weiderpass, Elisabete & Rounge, Trine Ballestad (2019). Eating habits and weight status in Finnish adolescents. Public Health Nutrition (PHN). ISSN 1368-9800. doi: 10.1017/S1368980019001447. Fulltekst i vitenarkiv
  • De Oliveira Figueiredo, Rejane Augusta; Viljakainen, Jannina; Viljakainen, Heli; Roos, Eva; Rounge, Trine Ballestad & Weiderpass, Elisabete (2019). Identifying eating habits in Finnish children: A cross-sectional study. BMC Public Health. ISSN 1471-2458. 19(312). doi: 10.1186/s12889-019-6603-x. Fulltekst i vitenarkiv
  • Figueiredo, Rejane Augusta de Oliveira; Simola-Ström, Sabina; Rounge, Trine Ballestad; Viljakainen, Heli; Eriksson, Johan G. & Roos, Eva [Vis alle 7 forfattere av denne artikkelen] (2019). Cohort Profile: The Finnish Health in Teens (Fin-HIT) study: A population-based study. International Journal of Epidemiology. ISSN 0300-5771. 48(1), s. 22–24H. doi: 10.1093/ije/dyy189. Fulltekst i vitenarkiv
  • Lagström, Sonja ; Umu, Sinan Uğur; Lepistö, Maija; Ellonen, Pekka; Meisal, Roger & Christiansen, Irene Kraus [Vis alle 8 forfattere av denne artikkelen] (2019). TaME-seq: An efficient sequencing approach for characterisation of HPV genomic variability and chromosomal integration. Scientific Reports. ISSN 2045-2322. 9:524, s. 1–12. doi: 10.1038/s41598-018-36669-6. Fulltekst i vitenarkiv
  • Viljakainen, Heli T.; Figueiredo, Rejane Augusta de Oliveira; Rounge, Trine Ballestad & Weiderpass, Elisabete (2019). Picky eating - A risk factor for underweight in Finnish preadolescents. Appetite. ISSN 0195-6663. 133, s. 107–114. doi: 10.1016/j.appet.2018.10.025. Fulltekst i vitenarkiv
  • Rounge, Trine Ballestad; Umu, Sinan Uğur; Keller, Andreas; Meese, Eckart; Ursin, Giske & Tretli, Steinar [Vis alle 8 forfattere av denne artikkelen] (2018). Circulating small non-coding RNAs associated with age, sex, smoking, body mass and physical activity. Scientific Reports. ISSN 2045-2322. 8( ). doi: 10.1038/s41598-018-35974-4. Fulltekst i vitenarkiv
  • Fehlmann, Tobias; Backes, Christina; Alles, Julia; Fischer, Ulrike; Hart, Martin & Kern, Fabian [Vis alle 20 forfattere av denne artikkelen] (2018). A high-resolution map of the human small non-coding transcriptome. Bioinformatics. ISSN 1367-4803. 34(10), s. 1621–1628. doi: 10.1093/bioinformatics/btx814.
  • Rounge, Trine Ballestad; Meisal, Roger; Nordby, Jan Inge; Ambur, Ole Herman; de Lange, Thomas & Hoff, Geir (2018). Evaluating gut microbiota profiles from archived fecal samples. BMC Gastroenterology. ISSN 1471-230X. 18(171). doi: 10.1186/s12876-018-0896-6. Fulltekst i vitenarkiv
  • Page, Christian; Vos, Linda; Rounge, Trine Ballestad; Harbo, Hanne Flinstad & Kulle, Bettina (2018). Assessing genome-wide significance for the detection of differentially methylated regions. Statistical Applications in Genetics and Molecular Biology. ISSN 1544-6115. 17(6). doi: 10.1515/sagmb-2017-0050. Fulltekst i vitenarkiv
  • Mandishora, Racheal Shamiso Dube; Gjøtterud, Kristina Stormo; Lagström, Sonja ; Stray-Pedersen, Babill; Duri, Kerina & Chin'ombe, Nyasha [Vis alle 11 forfattere av denne artikkelen] (2018). Intra-host sequence variability in human papillomavirus. Papillomavirus Research. The Journal of HPV and other Small DNA Tumor Viruses. ISSN 2405-8521. 5, s. 180–191. doi: 10.1016/j.pvr.2018.04.006. Fulltekst i vitenarkiv
  • Jørgensen, Tor Erik; Karlsen, Bård Ove; Emblem, Åse; Breines, Ragna; Andreassen, morten & Rounge, Trine Ballestad [Vis alle 15 forfattere av denne artikkelen] (2018). Mitochondrial genome variation of Atlantic cod. BMC Research Notes. ISSN 1756-0500. 11:397, s. 1–7. doi: 10.1186/s13104-018-3506-3. Fulltekst i vitenarkiv
  • Raju, Sajan C.; Lagström, Sonja ; Ellonen, Pekka; de Vos, Willem M.; Eriksson, Johan Gunnar & Weiderpass, Elisabete [Vis alle 7 forfattere av denne artikkelen] (2018). Reproducibility and repeatability of six high-throughput 16S rDNA sequencing protocols for microbiota profiling. Journal of Microbiological Methods. ISSN 0167-7012. 147, s. 76–86. doi: 10.1016/j.mimet.2018.03.003. Fulltekst i vitenarkiv
  • Ugur Umu, Sinan; Langseth, Hilde; Bucher-Johannessen, Cecilie; Fromm, Bastian; Keller, Andreas & Meese, Eckart [Vis alle 10 forfattere av denne artikkelen] (2018). A comprehensive profile of circulating RNAs in human serum. RNA Biology. ISSN 1547-6286. 15(2), s. 242–250. doi: 10.1080/15476286.2017.1403003.
  • Keller, Andreas; Rounge, Trine Ballestad; Backes, Christina; Ludwig, Nicole; Gislefoss, Randi Elin & Leidinger, Petra [Vis alle 8 forfattere av denne artikkelen] (2017). Sources to variability in circulating human miRNA signatures. RNA Biology. ISSN 1547-6286. 14(12), s. 1791–1798. doi: 10.1080/15476286.2017.1367888.
  • Mandishora, Racheal Shamiso Dube; Christiansen, Irene Kraus; Chin'ombe, Nyasha; Duri, Kerina; Ngara, Bernard & Rounge, Trine Ballestad [Vis alle 11 forfattere av denne artikkelen] (2017). Genotypic diversity of anogenital human papillomavirus in women attending cervical cancer screening in Harare, Zimbabwe. Journal of Medical Virology. ISSN 0146-6615. 89(9), s. 1671–1677. doi: 10.1002/jmv.24825.
  • Meisal, Roger; Rounge, Trine Ballestad; Christiansen, Irene Kraus; Eieland, Alexander Kirkeby; Worren, Merete Molton & Molden, Tor [Vis alle 10 forfattere av denne artikkelen] (2017). HPV Genotyping of Modified General Primer-Amplicons Is More Analytically Sensitive and Specific by Sequencing than by Hybridization. PLOS ONE. ISSN 1932-6203. 12(1). doi: 10.1371/journal.pone.0169074. Fulltekst i vitenarkiv
  • Rounge, Trine Ballestad; Page, Christian; Lepistö, Maija; Ellonen, Pekka; Andreassen, Bettina Kulle & Weiderpass, Elisabete (2016). Genome-wide DNA methylation in saliva and body size of adolescent girls. Epigenomics. ISSN 1750-1911. 8(11), s. 1495–1505. doi: 10.2217/epi-2016-0045. Fulltekst i vitenarkiv
  • Rounge, Trine Ballestad; Lauritzen, Marianne; Langseth, Hilde; Enerly, Espen; Lyle, Robert & Gislefoss, Randi Elin (2015). MicroRNA biomarker discovery and high-throughput DNA sequencing are possible using long-term archived serum samples. Cancer Epidemiology, Biomarkers and Prevention. ISSN 1055-9965. 24(9), s. 1381–1387. doi: 10.1158/1055-9965.EPI-15-0289.
  • Kristiansen, Wenche; Karlsson, Robert; Rounge, Trine Ballestad; Whitington, Thomas; Kulle, Bettina & Magnusson, Patrik K.E. [Vis alle 12 forfattere av denne artikkelen] (2015). Two new loci and gene sets related to sex determination and cancer progression are associated with susceptibility to testicular germ cell tumor. Human Molecular Genetics. ISSN 0964-6906. 24(14), s. 4138–4146. doi: 10.1093/hmg/ddv129.
  • Rounge, Trine Ballestad; Furu, Kari; Skotheim, Rolf Inge; Haugen, Trine B.; Grotmol, Tom & Enerly, Espen (2015). Profiling of the small RNA populations in human testicular germ cell tumors shows global loss of piRNAs. Molecular Cancer. ISSN 1476-4598. 14(153). doi: 10.1186/s12943-015-0411-4. Fulltekst i vitenarkiv
  • Xiao, Xi; Huang, Haomin; Ge, Zhiwei; Rounge, Trine Ballestad; Shi, Jiyan & Xu, Xinhua [Vis alle 8 forfattere av denne artikkelen] (2014). A pair of chiral flavonolignans as novel anti-cyanobacterial allelochemicals derived from barley straw (Hordeum vulgare): Characterization and comparison of their anti-cyanobacterial activities. Environmental Microbiology. ISSN 1462-2912. 16(5), s. 1238–1251. doi: 10.1111/1462-2920.12226.
  • Sogge, Hanne; Rohrlack, Thomas; Rounge, Trine Ballestad; Sønstebø, Jørn Henrik; Tooming-Klunderud, Ave & Kristensen, Tom [Vis alle 7 forfattere av denne artikkelen] (2013). Gene flow, recombination, and selection in cyanobacteria: population structure of geographically related Planktothrix Freshwater Strains. Applied and Environmental Microbiology. ISSN 0099-2240. 79(2), s. 508–515. doi: 10.1128/AEM.02417-12. Fulltekst i vitenarkiv
  • Tooming-Klunderud, Ave ; Sogge, Hanne; Rounge, Trine Ballestad; Nederbragt, Alexander Johan; Lagesen, Karin & Glöckner, Gernot [Vis alle 9 forfattere av denne artikkelen] (2013). From Green to Red: Horizontal Gene Transfer of the Phycoerythrin Gene Cluster between Planktothrix Strains. Applied and Environmental Microbiology. ISSN 0099-2240. 79(21), s. 6803–6812. doi: 10.1128/AEM.01455-13. Fulltekst i vitenarkiv
  • Star, Bastiaan; Nederbragt, Alexander Johan; Jentoft, Sissel; Grimholt, Unni; Malmstrøm, Martin & Gregers, Tone Fredsvik [Vis alle 42 forfattere av denne artikkelen] (2011). The genome sequence of Atlantic cod reveals a unique immune system. Nature. ISSN 0028-0836. 477(7363), s. 207–210. doi: 10.1038/nature10342. Fulltekst i vitenarkiv
  • Nederbragt, Alexander Johan; Rounge, Trine Ballestad; Kausrud, Kyrre & Jakobsen, Kjetill Sigurd (2010). Identification and Quantification of Genomic Repeats and Sample Contamination in Assemblies of 454 Pyrosequencing Reads. Sequencing. ISSN 2090-0325. 2010. doi: 10.1155/2010/782465.
  • Rounge, Trine Ballestad; Rohrlack, Thomas; Decenciere, Fernandiere Beatriz; Edvardsen, Bente; Kristensen, Tom & Jakobsen, Kjetill Sigurd (2010). SUBPOPULATION DIFFERENTIATION ASSOCIATED WITH NONRIBOSOMAL PEPTIDE SYNTHETASE GENE CLUSTER DYNAMICS IN THE CYANOBACTERIUM PLANKTOTHRIX SPP.1. Journal of Phycology. ISSN 0022-3646. 46(4), s. 645–652. doi: 10.1111/j.1529-8817.2010.00856.x.
  • Rounge, Trine Ballestad; Rohrlack, Thomas; Nederbragt, Alexander Johan; Kristensen, Tom & Jakobsen, Kjetill Sigurd (2009). A genome-wide analysis of nonribosomal peptide synthetase gene clusters and their peptides in a Planktothrix rubescens strain. BMC Genomics. ISSN 1471-2164. 10. doi: 10.1186/1471-2164-10-396.
  • Rounge, Trine Ballestad; Rohrlack, Thomas; Kristensen, Tom & Jakobsen, Kjetill Sigurd (2008). Recombination and selectional forces in cyanopeptolin NRPS operons from highly similar, but geographically remote Planktothrix strains. BMC Microbiology. ISSN 1471-2180. 8. doi: 10.1186/1471-2180-8-141.

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  • Wojewodzic, Marcin Wlodzimierz; Sydhagen, Kristin Aurora & Rounge, Trine Ballestad (2023). Building epigenetic clocks for estimating accelerating aging in patients with testicular cancer treated with cisplatin-based chemotherapy. Journal of Clinical Oncology. ISSN 0732-183X. 41. doi: 10.1200/JCO.2023.41.16_suppl.e24099. Fulltekst i vitenarkiv
  • Wojewodzic, Marcin Wlodzimierz; Burton, Joshua; Rounge, Trine Ballestad & Haugen, Trine B. (2023). Pre-diagnostic circulating RNAs networks identify testicular germ cell tumour susceptibility genes.
  • Rounge, Trine Ballestad (2023). Building epigenetic clocks for estimating accelerating aging in patients with testicular cancer treated with cisplatin-based chemotherapy.
  • Avershina, Ekaterina; Birkeland, Einar Elvbakken; Berstad, Paula; Hoff, Geir Svein & Rounge, Trine Ballestad (2022). Total neoplastic polyp volume is correlated to several bacterial taxa in faecal immunochemical test-positive CRC-screening participants.
  • Avershina, Ekaterina; Birkeland, Einar Elvbakken; Berstad, Paula; Hoff, Geir Svein & Rounge, Trine Ballestad (2022). Total neoplastic polyp volume is correlated to several bacterial taxa in faecal immunochemical test-positive CRC-screening participants.
  • Rounge, Trine Ballestad (2022). Predicting colorectal cancer using gut microbiome.
  • Rostami, Sina; Langseth, Hilde; lyle, robert; Bjørge, Tone; Pestarino, Luca & Rounge, Trine Ballestad (2022). Pre-diagnostic circulating RNAs in endometrial cancer – impact of body mass index.
  • Langseth, Hilde; Kymre, Kristina; Slyngstad, Tove; Rounge, Trine Ballestad; Gislefoss, Randi Elin & Lauritzen, Marianne (2022). Janus serumbank – jakten på biomarkører for kreft. Norsk Epidemiologi. ISSN 0803-2491. 30(1-2), s. 87–92. doi: 10.5324/nje.v30i1-2.4983.
  • Istvan, Paula; Birkeland, Einar Elvbakken; Rognes, Torbjørn & Rounge, Trine Ballestad (2021). Profiling gut viruses from metagenomes of Bowel Cancer Screening participants.
  • Lagström, Sonja ; van der Weele, Pascal; Rounge, Trine Ballestad; Christiansen, Irene Kraus; King, Audrey J. & Ambur, Ole Herman (2020). Erratum to “HPV16 whole genome minority variants in persistent infections from young Dutch women” (Journal of Clinical Virology (2019) 119 (24–30), (S1386653219301726), (10.1016/j.jcv.2019.08.003)). Journal of Clinical Virology. ISSN 1386-6532. 124. doi: 10.1016/j.jcv.2020.104286.
  • Lagström, Sonja ; Løvestad, Alexander; Umu, Sinan Uğur; Ambur, Ole Herman; Rounge, Trine Ballestad & Christiansen, Irene Kraus (2020). Chromosomal integration and APOBEC profiles differ between HPV16 and HPV18 positive cervical samples .
  • Løvestad, Alexander; Lagström, Sonja ; Christiansen, Irene Kraus; Rounge, Trine Ballestad & Ambur, Ole Herman (2020). Investigating intra-host genomic events of HPV 31, HPV33 and HPV45 positive cervical samples using deep sequencing.
  • Burton, Joshua; Hammer, Hugo Lewi; Umu, Sinan Uğur; Langseth, Hilde; Grotmol, Tom & Grimsrud, Tom Kristian [Vis alle 8 forfattere av denne artikkelen] (2018). Differentially expressed small non-coding RNA in serum from testicular germ cell tumour patients and controls.
  • Burton, Joshua; Hammer, Hugo Lewi; Umu, Sinan Uğur; Langseth, Hilde; Grotmol, Tom & Grimsrud, Tom Kristian [Vis alle 8 forfattere av denne artikkelen] (2018). Differentially expressed small non-coding RNA in serum from testicular germ cell tumour patients and controls.
  • Lagström, Sonja; Umu, Sinan Uğur; Lepistö, Maija; Ellonen, Pekka; Meisal, Roger & Christiansen, Irene Kraus [Vis alle 8 forfattere av denne artikkelen] (2018). TaME-seq: An efficient sequencing approach to characterise HPV genomic variability and chromosomal integration.
  • Lagström, Sonja; Umu, Sinan Uğur; Lepistö, Maija; Ellonen, Pekka; Meisal, Roger & Christiansen, Irene Kraus [Vis alle 8 forfattere av denne artikkelen] (2018). TaME-seq: An efficient sequencing approach to characterize human papillomavirus genomic variability and chromosomal integration.
  • Bucher-Johannessen, Cecilie; Page, Christian M.; Haugen, Trine B.; Fosså, Sophie Dorothea; Haugnes, Hege Sagstuen & Grotmol, Tom [Vis alle 7 forfattere av denne artikkelen] (2018). Epigenetic changes in testicular cancer survivors treated with cisplatin.
  • Burton, Joshua; Hammer, Hugo Lewi; Umu, Sinan Uğur; Langseth, Hilde; Grotmol, Tom & Grimsrud, Tom Kristian [Vis alle 8 forfattere av denne artikkelen] (2018). Small non-coding RNA in serum from testicular germ cell tumour patients identified by machine learning.
  • Lagström, Sonja; Gjøtterud, Kristina Stormo; Nygård, Mari; Christiansen, Irene Kraus; Ambur, Ole Herman & Rounge, Trine Ballestad (2017). Intra-HPV type genetic variation in liquid based cytology screening samples.
  • Lagström, Sonja; Umu, Sinan Uğur; Lepistö, Maija; Ellonen, Pekka; Meisal, Roger & Christiansen, Irene Kraus [Vis alle 8 forfattere av denne artikkelen] (2017). Human Papillomavirus whole genome sequencing reveals genetic diversity and human genome integration sites.
  • Mandishora, RS; Gjøtterud, Kristina Stormo; Stray-Pedersen, Babill; Chin'ombe, Nyasha; Duri, Kerina & Nygård, Mari [Vis alle 10 forfattere av denne artikkelen] (2017). Anal and vaginal HPV52: Understanding site-specific variance in women reporting for routine cervical cancer screening.
  • Mandishora, RS; Christiansen, Irene Kraus; Chin`ombe, N; Duri, Kerina; Rounge, Trine Ballestad & Meisal, Roger [Vis alle 9 forfattere av denne artikkelen] (2017). Do HIV-infected and Uninfected Women Have Different Human Papilloma Virus Genotypes Distribution: A Cross Sectional Study Carried out in Zimbabwe. AIDS Research and Human Retroviruses. ISSN 0889-2229. 32, s. 280–280.
  • Hansen, Mona; Kristiansen-Haugland, Hanne; Saltyte-Benth, Jurate; Myrvang, Ellen; Meisal, Roger & Rounge, Trine Ballestad [Vis alle 7 forfattere av denne artikkelen] (2016). Analytical performance of HPV genotyping methods on cervical liquid based cytology samples.
  • Sarkkola, Catharina; Rounge, Trine Ballestad; Simola-Ström, Sabina; von Kraemer, Stephanie; Roos, Eva & Weiderpass, Elisabete (2016). Validity of home-measured height, weight and waist circumference among adolescents. European Journal of Public Health. ISSN 1101-1262. 26(6), s. 975–977. doi: 10.1093/eurpub/ckw133.
  • Christiansen, Irene Kraus; Lagström, Sonja ; Meisal, Roger; Myrvang, Ellen; Kristiansen-Haugland, Hanne & Hansen, Mona [Vis alle 10 forfattere av denne artikkelen] (2015). Human papillomavirus genotyping by next generation sequencing; evaluation of amplification targets and sequencing parameters.
  • Grotmol, Tom; Kristiansen, Wenche; Karlsson, Robert; Rounge, Trine Ballestad; Whitington, Thomas & Andreassen, Bettina K [Vis alle 11 forfattere av denne artikkelen] (2015). Two new loci and gene sets related to sex determination and cancer progression are associated with susceptibility to testicular germ cell tumor.
  • Rounge, Trine Ballestad; Furu, Kari; Skotheim, Rolf Inge; Haugen, Trine B.; Enerly, Espen & Grotmol, Tom (2015). Small RNA profiling of human testicular cancer tissue samples shows abundant tRNA fragments and global loss of piRNA.
  • Furu, Kari; Rounge, Trine Ballestad; Enerly, Espen; Skotheim, Rolf Inge; Grimsrud, Tom Kristian & Haugen, Trine B. [Vis alle 7 forfattere av denne artikkelen] (2014). Differential microRNA expression in testicular cancer versus normal tissue.
  • Furu, Kari; Rounge, Trine Ballestad; Enerly, Espen; Skotheim, Rolf Inge; Grimsrud, Tom Kristian & Haugen, Trine B. [Vis alle 7 forfattere av denne artikkelen] (2014). Differential microRNA expression in testicular cancer versus normal tissue .
  • Kristiansen, Wenche; Karlsson, Robert; Rounge, Trine Ballestad; Whitington, Thomas; Kulle, Bettina & Magnusson, Patrik K.E. [Vis alle 11 forfattere av denne artikkelen] (2014). Genome-wide association study reveals two new susceptibility loci for testicular germ cell tumour.
  • Hansen, Mona; Myrvang, Ellen; Kraus Chrsitiansen, Irene; Molden, Tor; Eieland, Alexander Kirkeby & Meisal, Roger [Vis alle 13 forfattere av denne artikkelen] (2014). Human papillomavirus prevalence and genotype distribution in urine samples from non-vaccinated cohorts of 17 and 21 year old girls/women in Norway.
  • Meisal, Roger; Rounge, Trine Ballestad; Molden, Tor; Worren, Merete Molton; Kraus Christiansen, Irene & Hovig, Eivind [Vis alle 8 forfattere av denne artikkelen] (2014). High throughput DNA sequencing for the detection and genotyping of human papillomavirus.
  • Nederbragt, Alexander Johan; Tørresen, Ole Kristian; Khelik, Ksenia; Lagesen, Karin; Rounge, Trine Ballestad & Star, Bastiaan [Vis alle 13 forfattere av denne artikkelen] (2012). Challenges and Opportunities for Improving the Atlantic Cod Genome Assembly and Annotation.
  • Star, Bastiaan; Nederbragt, Alexander Johan; Jentoft, Sissel; Grimholt, Unni; Malmstrøm, Martin & Gregers, Tone Fredsvik [Vis alle 18 forfattere av denne artikkelen] (2011). The genome of Atlantic cod reveals a unique immune system.
  • Rounge, Trine Ballestad & Nederbragt, Alexander Johan (2011). The Atlantic Cod Genome Project.
  • Grimholt, Unni; Nederbragt, Alexander Johan; Rounge, Trine Ballestad; Malmstrøm, Martin; Star, Bastiaan & Tooming-Klunderud, Ave [Vis alle 12 forfattere av denne artikkelen] (2009). The cod genome project.
  • Grimholt, Unni; Malmstrøm, Martin; Nederbragt, Alexander Johan; Rounge, Trine Ballestad; Jentoft, Sissel & Tooming-Klunderud, Ave [Vis alle 10 forfattere av denne artikkelen] (2009). The lack of cod MHC class II.
  • Jakobsen, Kjetill Sigurd; Rounge, Trine Ballestad; Nederbragt, Alexander Johan & Star, Bastiaan (2009). Sequencing of the cod genome: progress and perspectives.

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Publisert 25. juni 2020 13:24 - Sist endret 7. sep. 2023 08:50