Available software

Recently published software from our group

BioNumpy (2024): codebase / paper

CARMA (2020) codebase / paper
Supplement to the paper "DNA copy number motifs are strong and independent predictors of survival in breast cancer" by Arne Pladsen et al. 

Chap (2023-) codebase / web page

compAIRR (2022): codebase / paper

ImmuneML (2021): codebase / paper

KAGE (2022): code / paper

VSEARCH (2016): paper

Software developed in our group further back in time

PARALIGN (2005): paper

RNAmmer (2007): paper

Survival Prediction with Microarrays (2007): paper

ASCAT (2010): paper

Genomic Hyperbrowser (2010)

SWIPE (2011):  paper

Copynumber (2012): paper

clusterGenomics (2013): paper

SWARM (2014): paper