Siv Nam Khang Hoff

Image of Siv Nam Khang Hoff
Norwegian version of this page
Room 3303
Username
Visiting address Blindernveien 31 0371 Oslo
Postal address Postboks 1066 Blindern 0316 Oslo

Academic interests

I started as a PhD student at the Centre for Ecological and Evolutionary Synthesis, University of Oslo (UiO), March 2018.

I have a master degree in evolutionary comparative genomics from UiO. By using a novel approach of capturing only the relevant genomic regions prior to sequencing, I investigated the organization and variations of the hemoglobin genes in a variety of codfish species. Starting on a PhD project under the Nansen Legacy, my interest lies in investigating the population genomic structure of three key ecosystem fish species in the northern Barents Sea, namely Atlantic cod, capelin, and polar cod. The Northeast Arctic cod, also known as skrei, is one of the most important commercial fish species of the region. Capelin and polar cod is both important food prey for the Northeast Arctic cod, as well as a wide range of other arctic animals. The project aims to gain better understanding of population structures of these species, and to identify signatures of directional selection, such as temperature adaptations. In addition to spatial structure we aim to assess possible temporal structure, linked to seasonal partitioning of habitat use.
 

Tags: Genomics, Evolutionary biology, Comparative genomics, Population genomics, Genetics

Publications

  • Pinninti, Likith Reddy; Maurstad, Marius Filomeno; Hoff, Siv Nam Khang; Kristensen, Torstein; Noble, Leslie Robert & Jentoft, Sissel [Show all 7 contributors for this article] (2023). The complete mitochondrial genome of the Atlantic spiny lumpsucker Eumicrotremus spinosus (Fabricius, 1776). Mitochondrial DNA Part B: Resources. ISSN 2380-2359. 8(3), p. 364–367. doi: 10.1080/23802359.2023.2184649. Full text in Research Archive
  • Nilsson, Pernille; Ravinet, Mark; Cui, Yujun; Berg, Paul Ragnar; Zhang, Yujiang & Guo, Rong [Show all 17 contributors for this article] (2022). Polygenic plague resistance in the great gerbil uncovered by population sequencing. PNAS Nexus. ISSN 2752-6542. 1(5). doi: 10.1093/pnasnexus/pgac211.
  • Roth, Olivia; Solbakken, Monica Hongrø; Tørresen, Ole K.; Bayer, Till; Matschiner, Michael & Baalsrud, Helle Tessand [Show all 12 contributors for this article] (2020). Evolution of male pregnancy associated with remodeling of canonical vertebrate immunity in seahorses and pipefishes. Proceedings of the National Academy of Sciences of the United States of America. ISSN 0027-8424. 117(17), p. 9431–9439. doi: 10.1073/pnas.1916251117.
  • Cayuela, Hugo; Rougemont, Quentin; Laporte, Martin; Mérot, Claire; Normandeau, Eric & Dorant, Yann [Show all 15 contributors for this article] (2020). Shared ancestral polymorphism and chromosomal rearrangements as potential drivers of local adaptation in a marine fish. Molecular Ecology. ISSN 0962-1083. 29, p. 2379–2398. doi: 10.1111/mec.15499.
  • Hoff, Siv Nam Khang; Baalsrud, Helle Tessand; Tooming-Klunderud, Ave; Skage, Morten; Richmond, Todd & Obernosterer, Gregor [Show all 10 contributors for this article] (2018). Long‐read sequence capture of the haemoglobin gene clusters across codfish species. Molecular Ecology Resources. ISSN 1755-098X. 19(1), p. 245–259. doi: 10.1111/1755-0998.12955.

View all works in Cristin

  • Hoff, Siv Nam Khang; Maurstad, Marius Filomeno; Alan, Le Moan; Ravinet, Mark; Durant, Joël & Tørresen, Ole K. [Show all 18 contributors for this article] (2023). Identification of multiple chromosomal inversions and fusions in a keystone Arctic species with high gene flow.
  • Hoff, Siv Nam Khang; Maurstad, Marius Filomeno; Le Moan, Alan; Ravinet, Mark; Durant, Joël & Tørresen, Ole Kristian [Show all 18 contributors for this article] (2023). Identification of multiple chromosomal inversions and fusions in a keystone Arctic species with high gene flow.
  • Hoff, Siv Nam Khang (2016). Comparative genomics by targeted capture and long read sequencing reveal dynamic evolution of hemoglobin gene clusters in codfishes.
  • Husson, Berengere; Eriksen, Elena; Jentoft, Sissel; Boge, Erling; Borgå, Katrine & Chierici, Melissa [Show all 36 contributors for this article] (2023). Polar cod connectivity cruise 2022 Cruise Report. UiT Norges arktiske universitet. ISSN 2703-7525.
  • Reigstad, Marit; Gabrielsen, Tove M.; Amargant-Arumi, Marti; Amundsen, Rita; Bluhm, Bodil & Bodur, Yasemin V. [Show all 37 contributors for this article] (2022). Seasonal Cruise Q3: Cruise Report . Septentrio Academic Publishing. ISSN 2703-7525.
  • Ingvaldsen, Randi Brunvær; Bluhm, Bodil; Aberle-Malzahn, Nicole; Amundsen, Rita; Ardelan, Murat Van & Bagøien, Espen [Show all 33 contributors for this article] (2020). Joint Cruise 1-2 2018: Cruise Report . Septentrio Academic Publishing.

View all works in Cristin

Published May 9, 2018 2:58 PM - Last modified Mar. 9, 2023 3:15 PM

Projects