Russell Orr

Image of Russell Orr
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Phone +47-22854510
Username
Visiting address Sars gate 1 None 0562 OSLO
Postal address Postboks 1172, Blindern 0318 OSLO

Projects

  • Algal toxins & polyunsaturated fatty acids: a polyketide genomic approach to safe and efficient utilisation of microalgae in bioproduction

Publications

  • Orr, Russell; Zhao, Sen; Klaveness, Dag; Yabuki, Akinori; Ikeda, Keiji; Makoto, Watanabe M. & Shalchian-Tabrizi, Kamran (2018). Enigmatic diphyllatea eukaryotes: culturing and targeted PacBio RS amplicon sequencing reveals a higher order taxonomic diversity and global distribution. BMC Evolutionary Biology.  ISSN 1471-2148.  18:115, s 1- 13 . doi: 10.1186/s12862-018-1224-z
  • Krabberød, Anders Kristian; Orr, Russell; Bråte, Jon; Kristensen, Tom; Bjørklund, Kjell Rasmus & Shalchian-Tabrizi, Kamran (2017). Single cell transcriptomics, mega-phylogeny and the genetic basis of morphological innovations in Rhizaria. Molecular biology and evolution.  ISSN 0737-4038. . doi: /10.1093/molbev/msx075 Show summary
  • Orr, Russell; Rombauts, Stephane; Van de Peer, Yves & Shalchian-Tabrizi, Kamran (2017). Draft genome sequences of two unclassified bacteria, Hydrogenophaga sp. strains IBVHS1 and IBVHS2, isolated from environmental samples. Genome Announcements.  ISSN 2169-8287.  5(34) . doi: 10.1128/genomeA.00884-17
  • Orr, Russell; Shalchian-Tabrizi, Kamran; Van de Peer, Yves & Rombauts, S (2017). Draft Genome Sequences of Two Unclassified Bacteria, Sphingomonas sp. Strains IBVSS1 and IBVSS2, Isolated from Environmental Samples. Genome Announcements.  ISSN 2169-8287.  5(34) . doi: 10.1128/genomeA.00894-17
  • Orr, Russell; Shalchian-Tabrizi, Kamran; Van de Peer, Yves & Rombauts, S (2017). Draft genome Sequences of two Unclassified Chitinophagaceae bacteria, IBVUCB1 and IBVUCB2, Isolated from Environmental Samples. Genome Announcements.  ISSN 2169-8287. . doi: 10.1128/genomeA.00787-17
  • Murray, Shauna A.; Diwan, Rutuja; Orr, Russell; Kohli, Gurjeet S. & John, Uwe (2015). Gene duplication, loss and selection in the evolution of saxitoxin biosynthesis in alveolates. Molecular Phylogenetics and Evolution.  ISSN 1055-7903.  92, s 165- 180 . doi: 10.1016/j.ympev.2015.06.017
  • Stø, Ida Myhrer; Orr, Russell; Fooyontphanich, Kim; Jin, Xu; Knutsen, Jonfinn Mordekai Blix; Fischer, Urs; Tranbarger, Timothy J.; Nordal, Inger & Aalen, Reidunn B. (2015). Conservation of the abscission signaling peptide IDA during Angiosperm evolution: Withstanding genome duplications and gain and loss of the receptors HAE/HSL2. Frontiers in Plant Science.  ISSN 1664-462X.  6(OCTOBER) . doi: 10.3389/fpls.2015.00931
  • Murray, Shauna A.; Hoppenrath, Mona; Orr, Russell; Bolch, Christopher; John, Uwe; Diwan, Rutuja; Yauwenas, Rouna; Harwood, Tim; de Salas, Miguel; Neilan, Brett A. & Hallegraeff, Gustaaf (2014). Alexandrium diversaporum sp. nov., a new non-saxitoxin producing species: Phylogeny, morphology and sxtA genes. Harmful Algae.  ISSN 1568-9883.  31, s 54- 65 . doi: 10.1016/j.hal.2013.09.005
  • Stensrud, Øyvind; Orr, Russell; Reier-Røberg, Kjetil; Schumacher, Trond & Høiland, Klaus (2014). Phylogenetic relationships in Cortinarius with focus on North European species. Karstenia.  ISSN 0453-3402.  54(2), s 57- 71 Show summary
  • Orr, Russell; Stüken, Anke; Murray, Shauna A. & Jakobsen, Kjetill Sigurd (2013). Evolution and Distribution of Saxitoxin Biosynthesis in Dinoflagellates. Marine Drugs.  ISSN 1660-3397.  11(8), s 2814- 2828 . doi: 10.3390/md11082814
  • Orr, Russell; Stüken, Anke; Murray, Shauna A. & Jakobsen, Kjetill Sigurd (2013). Evolutionary Acquisition and Loss of Saxitoxin Biosynthesis in Dinoflagellates: the Second "Core" Gene, sxtG. Applied and Environmental Microbiology.  ISSN 0099-2240.  79(7), s 2128- 2136 . doi: 10.1128/AEM.03279-12 Full text in Research Archive.
  • Dittami, Simon; Riisberg, Ingvild; John, Uwe; Orr, Russell; Jakobsen, Kjetill Sigurd & Edvardsen, Bente (2012). Analysis of Expressed Sequence Tags from the Marine Microalga Pseudochattonella farcimen (Dictyochophyceae). Protist.  ISSN 1434-4610.  163(1), s 143- 161 . doi: 10.1016/j.protis.2011.07.004
  • Murray, Shauna A.; Wiese, Maria; Neilan, Brett A.; Orr, Russell; de Salas, Miguel; Brett, Steve & Hallegraeff, Gustaaf (2012). A reinvestigation of saxitoxin production and sxtA in the 'non-toxic' Alexandrium tamarense Group V clade. Harmful Algae.  ISSN 1568-9883.  18, s 96- 104 . doi: 10.1016/j.hal.2012.05.001
  • Orr, Russell; Murray, Shauna A.; Stüken, Anke; Rhodes, Lesley & Jakobsen, Kjetill Sigurd (2012). When Naked Became Armored: An Eight-Gene Phylogeny Reveals Monophyletic Origin of Theca in Dinoflagellates. PLoS ONE.  ISSN 1932-6203.  7(11) . doi: 10.1371/journal.pone.0050004 Full text in Research Archive.
  • Orr, Russell; Stüken, Anke; Rundberget, Thomas; Eikrem, Wenche & Jakobsen, Kjetill Sigurd (2011). Improved phylogenetic resolution of toxic and non-toxic Alexandrium strains using a concatenated rDNA approach. Harmful Algae.  ISSN 1568-9883.  10(6), s 676- 688 . doi: 10.1016/j.hal.2011.05.003
  • Stüken, Anke Corinna; Orr, Russell; Kellmann, Ralf; Murray, Shauna A.; Neilan, Brett A. & Jakobsen, Kjetill Sigurd (2011). Discovery of Nuclear-Encoded Genes for the Neurotoxin Saxitoxin in Dinoflagellates. PLoS ONE.  ISSN 1932-6203.  6(5) . doi: 10.1371/journal.pone.0020096
  • Kellmann, Ralf; Stüken, Anke; Orr, Russell J. S.; Svendsen, Helene M. & Jakobsen, Kjetill S. (2010). Biosynthesis and Molecular Genetics of Polyketides in Marine Dinoflagellates. Marine Drugs.  ISSN 1660-3397.  8(4), s 1011- 1048 . doi: 10.3390/md8041011
  • Riisberg, Ingvild; Orr, Russell; Kluge, Ragnhild; Shalchian-Tabrizi, Kamran; Bowers, HA; Vishwanath, Patil; Edvardsen, Bente & Jakobsen, Kjetill Sigurd (2009). Seven Gene Phylogeny of Heterokonts. Protist.  ISSN 1434-4610.  160(2), s 191- 204 . doi: 10.1016/j.protis.2008.11.004
  • Kumar, Surendra; Skjæveland, Åsmund; Orr, Russell; Enger, Pål; Ruden, Torgeir Andersen; Mevik, Bjørn-Helge; Burki, Fabien; Botnen, Andreas Valeur & Shalchian-Tabrizi, Kamran (2009). AIR: A batch-oriented web program package for construction of supermatrices ready for phylogenomic analyses. BMC Bioinformatics.  ISSN 1471-2105.  10 . doi: 10.1186/1471-2105-10-357 Full text in Research Archive. Show summary
  • Minge, Marianne Aastebøl; Silberman, Jeffrey; Orr, Russell; Cavalier-Smith, Thomas; Shalchian-Tabrizi, Kamran; Burki, Fabien; Skjæveland, Åsmund & Jakobsen, Kjetill Sigurd (2009). Evolutionary position of breviate amoebae and the primary eukaryote divergence. Proceedings of the Royal Society of London. Biological Sciences.  ISSN 0962-8452.  276(1657), s 597- 604 . doi: 10.1098/rspb.2008.1358
  • Shalchian-Tabrizi, Kamran; Minge, Marianne Aastebøl; Espelund, Mari; Orr, Russell; Ruden, Torgeir Andersen; Jakobsen, Kjetill Sigurd & Cavalier-Smith, Thomas (2008). Multigene Phylogeny of Choanozoa and the Origin of Animals. PLoS ONE.  ISSN 1932-6203.  3(5)

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  • Orr, Russell (2017). In Silico Prediction of Ligand-Binding Sites of Plant Receptor Kinases Using Conservation Mapping. Plant Receptor Kinases: Methods and Protocols. Humana Press.  ISBN 978-1-4939-7063-6.  196 s.

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  • Orr, Russell (2017). Deep Genome Initiative.
  • Orr, Russell (2017). Genome Dynamics in early eukaryote evolution an update!.
  • Orr, Russell (2017). Genome dynamics in early eukaryote evolution, progress rapport!.
  • Orr, Russell; Rombauts, S; Van De Peer, Yves & Shalchian-Tabrizi, Kamran (2017). Erratum to "Draft Genome Sequences of Two Unclassified Bacteria, Sphingomonas sp. Strains IBVSS1 and IBVSS2, Isolated from Environmental Samples" [Genome Announc., 2017, 5 (34):e00894-17.] Doi: 10.1128/genomeA.00894-17.. Genome Announcements.  ISSN 2169-8287.  5(41) . doi: 10.1128/genomeA.01175-17
  • Orr, Russell; Rombauts, Stephane; Van de Peer, Yves & Shalchian-Tabrizi, Kamran (2017). Draft genome sequences of two unclassified Chitinophagaceae bacteria, IBVUCB1 and IBVUCB2, isolated from environmental samples. Genome Announcements.  ISSN 2169-8287.  5(33), s 1- 3 . doi: 10.1128/genomeA.00787-17
  • Orr, Russell; Rombauts, Stephane; Van de Peer, Yves & Shalchian-Tabrizi, Kamran (2017). Draft genome sequences of two unclassified bacteria, Sphingomonas sp. strains IBVSS1 and IBVSS2, isolated from environmental samples. Genome Announcements.  ISSN 2169-8287.  5:e00894-17(34), s 1- 3 . doi: 10.1128/genomeA.00894-17
  • Orr, Russell; Rombauts, Stephane; Van de Peer, Yves & Shalchian-Tabrizi, Kamran (2017). Erratum: "Draft genome sequences of two unclassified Chitinophagaceae bacteria, IBVUCB1 and IBVUCB2, isolated from environmental samples" [Genome Announc, 5, 33, (2017), (e00787-17)] DOI:10.1128/genomeA.00787-17. Genome Announcements.  ISSN 2169-8287.  5(41:e01152-17), s 1- 1 . doi: 10.1128/genomeA.01152-17
  • Enevoldsen, Emily; Boeve, Jeroen; Orr, Russell; Waeschenbach, Andrea & Liow, Lee Hsiang (2016). Advancing bryozoan phylogenetics: mitochondrial and nuclear genes.
  • Orr, Russell (2016). Genome dynamics in early eukaryotic evolution. Importance of enigmatic lineages.
  • Orr, Russell (2016). Genome dynamics in early eukaryotic evolution. Importance of enigmatic lineages.
  • Orr, Russell (2016). PacBio sequencing reveals the diversity and ecology of a deeply diverging eukaryote lineage..
  • Orr, Russell; Zhao, Sen; Yabuki, Akinori & Shalchian-Tabrizi, Kamran (2016). PacBio sequencing reveals the diversity and ecology of a deeply diverging eukaryote lineage.
  • Orr, Russell (2015). Genome dynamics in early eukaryotic evolution. Importance of enigmatic lineages.
  • Orr, Russell (2015). Genome dynamics in early eukaryotic evolution. Importance of enigmatic lineages.
  • Enevoldsen, Emily; Liow, Lee Hsiang; Voje, Kjetil L.; Orr, Russell; Shalchian-Tabrizi, Kamran & Krabberød, Anders Kristian (2014). Macroevolution through molecular and morphological lenses: a history of microporellids.
  • Orr, Russell (2014). Genome dynamics in early eukaryotic evolution: importance of enigmatic lineages.
  • Orr, Russell (2014). Genome dynamics in early eukaryotic evolution: importance of enigmatic lineages.
  • Orr, Russell (2014). Genome dynamics in early eukaryotic evolution: importance of enigmatic lineages. Show summary
  • Stüken, Anke; Figueroa, Rosa; Orr, Russell & Jakobsen, Kjetill Sigurd (2012). Is sxt gene copy number related to saxitoxin synthesis?.
  • Stüken, Anke; Orr, Russell; Kellmann, Ralf; Murray, Shauna A.; Neilan, Brett A. & Jakobsen, Kjetill Sigurd (2011). Discovery of nucelar-encoded genes for the neurotoxin saxitoxin in dinoflagellates.
  • Stüken, Anke; Orr, Russell; Kellmann, Ralf; Murray, Shauna A.; Neilan, Brett A. & Jakobsen, Kjetill Sigurd (2011). Discovery of nucelar-encoded genes for the neurotoxin saxitoxin in dinoflagellates.
  • Dittami, Simon; Riisberg, Ingvild; John, Uwe; Orr, Russell; Shalchian-Tabrizi, Kamran; Jakobsen, Kjetill Sigurd & Edvardsen, Bente (2010). Analysis of expressed sequence tags from the ichtyotoxic dictyochophyte Pseudochattonella farcimen. Show summary
  • Orr, Russell; Stüken, Anke; Rundberget, Thomas; Eikrem, Wenche & Jakobsen, Kjetill Sigurd (2010). Improved phylogenetic resolution of toxic and non-toxic Alexandrium strains using a concatenated rDNA approach.
  • Orr, Russell; Stüken, Anke; Rundberget, Thomas; Eikrem, Wenche & Jakobsen, Kjetill Sigurd (2010). Improved phylogenetic resolution of toxic and non-toxic Alexandrium strains using a concatenated rDNA approach.
  • Stüken, Anke; Orr, Russell; Kellmann, Ralf; Murray, Shauna A.; Mihali, Troco Kaan; Neilan, Brett A. & Jakobsen, Kjetill Sigurd (2010). Saxitoxin gene identified in dinoflagellates.
  • Minge, Marianne Aastebøl; Silberman, Jeffrey; Orr, Russell; Cavalier-Smith, Thomas; Shalchian-Tabrizi, Kamran; Burki, Fabien; Skjæveland, Åsmund & Jakobsen, Kjetill Sigurd (2008). Breviata anathema - an unusual Amoebozoa.
  • Orr, Russell; Espelund, Mari; Kellmann, Ralf & Jakobsen, Kjetill Sigurd (2008). Evolution witihin the genus Alexandrium focusing on toxicity.
  • Shalchian-Tabrizi, Kamran; Minge, Marianne Aastebøl; Espelund, Mari; Orr, Russell; Ruden, Torgeir A.; Jakobsen, Kjetill Sigurd & Cavalier-Smith, Thomas (2008). The Choanozoan Ministeria vibrans: Multigene Phylogeny and the Origin of Animals. Show summary

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Published May 26, 2011 9:52 PM - Last modified Sep. 11, 2014 10:26 AM