Eivind Hovig

Image of Eivind Hovig
Norwegian version of this page
Phone +47 22858504
Room 4417
Username
Visiting address Gaustadalleen 23 B Ole Johan Dahls hus 0373 Oslo
Postal address Postboks 1080, Blindern 0316 Oslo

Phone number: +47-22781778

Tags: Life sciences, Bioinformatics, ELIXIR Oslo

Publications

  • Billingham, Lucinda; Brown, Lynn; Framke, Theodor; Greystoke, Alistair; Hovig, Eivind & Mathur, Siddharta [Show all 13 contributors for this article] (2023). Histology independent drug development – Is this the future for cancer drugs? Cancer Treatment Reviews. ISSN 0305-7372. 123. doi: 10.1016/j.ctrv.2023.102674.
  • Rauluseviciute, Ieva; Riudavets-Puig, Rafael; Blanc-Mathieu, Romain; Castro Mondragon, Jaime Abraham; Ferenc, Katalin Terezia & Kumar, Vipin [Show all 20 contributors for this article] (2023). JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Research (NAR). ISSN 0305-1048. 52(D1), p. D174–D182. doi: 10.1093/nar/gkad1059.
  • Møller, Pål; Seppälä, Toni T.; Ahadova, Aysel; Crosbie, Emma J.; Holinski-Feder, Elke & Scott, Rodney [Show all 49 contributors for this article] (2023). Dominantly inherited micro-satellite instable cancer – the four Lynch syndromes - an EHTG, PLSD position statement. Hereditary Cancer in Clinical Practice. ISSN 1731-2302. 21(1), p. 1–12. doi: 10.1186/s13053-023-00263-3. Full text in Research Archive
  • Akdeniz, Bayram Cevdet ; Mattingsdal, Morten; Dominguez-Valentin, Mev; Frei, Oleksandr; Shadrin, Alexey & Puustusmaa, Mikk [Show all 12 contributors for this article] (2023). A Breast Cancer Polygenic Risk Score Is Feasible for Risk Stratification in the Norwegian Population. Cancers. ISSN 2072-6694. 15(16). doi: 10.3390/cancers15164124. Full text in Research Archive
  • Namløs, Heidi Maria; Khelik, Ksenia; Nakken, Sigve; Vodak, Daniel; Hovig, Eivind & Myklebost, Ola [Show all 8 contributors for this article] (2023). Chromosomal instability and a deregulated cell cycle are intrinsic features of high-risk gastrointestinal stromal tumours with a metastatic potential. Molecular Oncology. ISSN 1574-7891. 17(11), p. 2432–2450. doi: 10.1002/1878-0261.13514. Full text in Research Archive
  • Nakken, Sigve; Gundersen, Sveinung; Bernal, Fabian Leonardo Martinez; Polychronopoulos, Dimitris; Hovig, Eivind & Wesche, Jørgen (2023). Comprehensive interrogation of gene lists from genome-scale cancer screens with oncoEnrichR. International Journal of Cancer. ISSN 0020-7136. 153(10), p. 1819–1828. doi: 10.1002/ijc.34666. Full text in Research Archive
  • Kalyanasundaram, Sumana; Lefol, Yohan Pierre; Gundersen, Sveinung; Rognes, Torbjørn; Alsøe, Lene & Nilsen, Hilde [Show all 9 contributors for this article] (2023). hGSuite HyperBrowser: A web-based toolkit for hierarchical metadata-informed analysis of genomic tracks. PLOS ONE. ISSN 1932-6203. 18(7). doi: 10.1371/journal.pone.0286330. Full text in Research Archive
  • Dominguez-Valentin, Mev; Haupt, Saskia; Seppälä, Toni T.; Sampson, Julian R.; Sunde, Lone & Bernstein, Inge [Show all 116 contributors for this article] (2023). Mortality by age, gene and gender in carriers of pathogenic mismatch repair gene variants receiving surveillance for early cancer diagnosis and treatment: a report from the prospective Lynch syndrome database. EClinicalMedicine. ISSN 2589-5370. 58. doi: 10.1016/j.eclinm.2023.101909.
  • Høye, Eirik; Dagenborg, Vegar Johansen; Kristensen, Annette Torgunrud; Lund-Andersen, Christin; Fretland, Åsmund Avdem & Lorenz, Susanne [Show all 13 contributors for this article] (2023). T cell receptor repertoire sequencing reveals chemotherapy-driven clonal expansion in colorectal liver metastases. GigaScience. ISSN 2047-217X. 12. doi: 10.1093/gigascience/giad032. Full text in Research Archive
  • Rodriguez-Varela, Ricardo; Moore, Kristjan H.S.; Ebenesersdottir, Sunna; Kilinc, Gulsah; Kjellström, Anna & Papmehl-Dufay, Ludvig [Show all 44 contributors for this article] (2023). The genetic history of Scandinavia from the Roman Iron Age to the present. Cell. ISSN 0092-8674. 186(1), p. 32–46. doi: 10.1016/j.cell.2022.11.024. Full text in Research Archive
  • Akdeniz, Bayram Cevdet ; Frei, Oleksandr; Shadrin, Alexey; Vetrov, Dmitry; Kropotov, Dmitry & Dale, Anders [Show all 8 contributors for this article] (2022). Finemap-MiXeR: A variational Bayesian approach for genetic finemapping. bioRxiv. ISSN 2692-8205.
  • Akdeniz, Bayram Cevdet ; Frei, Oleksandr; Hagen, Espen; Filiz, Tahir Tekin; Karthikeyan, Sandeep & Pasman, Joëlle [Show all 18 contributors for this article] (2022). COGEDAP: A COmprehensive GEnomic Data Analysis Platform. arXiv.org. ISSN 2331-8422.
  • Hanes, Robert; Ayuda-Duran, Maria del Pilar; Rønneberg, Leiv; Nakken, Sigve; Hovig, Eivind & Zucknick, Manuela [Show all 7 contributors for this article] (2022). screenwerk: a modular tool for the design and analysis of drug combination screens. Bioinformatics. ISSN 1367-4803. 39(1). doi: 10.1093/bioinformatics/btac840. Full text in Research Archive
  • Giliberto, Mariaserena; Miranda Santana, Leonardo; Holien, Toril; Misund, Kristine; Nakken, Sigve & Vodak, Daniel [Show all 12 contributors for this article] (2022). Mutational analysis and protein profiling predict drug sensitivity in multiple myeloma cell lines. Frontiers in Oncology. ISSN 2234-943X. 12:1040730, p. 1–14. doi: 10.3389/fonc.2022.1040730. Full text in Research Archive
  • Zavaleta, Elizabeth; Solis, Nelly; Palacios, Maria Isabel; Zevallos-Escobar, Liz Elva; Corales, Edison Vasquez & Bazo-Alvarez, Juan Carlos [Show all 17 contributors for this article] (2022). Genetic Characterization in High-Risk Individuals from a Low-Resource City of Peru. Cancers. ISSN 2072-6694. 14(22), p. 1–13. doi: 10.3390/cancers14225603. Full text in Research Archive
  • Møller, Pål; Seppälä, Toni; Dowty, James G.; Haupt, Saskia; Dominguez-Valentin, Mev & Sunde, Lone [Show all 157 contributors for this article] (2022). Colorectal cancer incidences in Lynch syndrome: a comparison of results from the prospective lynch syndrome database and the international mismatch repair consortium. Hereditary Cancer in Clinical Practice. ISSN 1731-2302. 20(1). doi: 10.1186/s13053-022-00241-1.
  • Høye, Eirik; Fromm, Bastian; Böttger, Paul H.M.; Domanska, Diana; Kristensen, Annette Torgunrud & Lund-Andersen, Christin [Show all 13 contributors for this article] (2022). A comprehensive framework for analysis of microRNA sequencing data in metastatic colorectal cancer. NAR Cancer. ISSN 2632-8674. 4(1), p. 1–13. doi: 10.1093/narcan/zcab051. Full text in Research Archive
  • Ellingsen, Espen Basmo; Bounova, Gergana; Kerzeli, Iliana; Anzar, Irantzu; Simnica, Donjete & Aamdal, Elin [Show all 14 contributors for this article] (2022). Characterization of the T cell receptor repertoire and melanoma tumor microenvironment upon combined treatment with ipilimumab and hTERT vaccination. Journal of Translational Medicine. ISSN 1479-5876. 20(1). doi: 10.1186/s12967-022-03624-z. Full text in Research Archive
  • Flobak, Åsmund; Skånland, Sigrid S; Hovig, Eivind; Tasken, Kjetil & Russnes, Hege Elisabeth Giercksky (2022). Functional precision cancer medicine: drug sensitivity screening enabled by cell culture models. TIPS - Trends in Pharmacological Sciences. ISSN 0165-6147. 43(11), p. 973–985. doi: 10.1016/j.tips.2022.08.009. Full text in Research Archive
  • Alver, Tine Norman; Heintz, Karen Marie; Hovig, Eivind & Bøe, Sigurd (2022). Cooperative induction of receptor tyrosine kinases contributes to adaptive MAPK drug resistance in melanoma through the PI3K pathway. Cancer Reports. ISSN 2573-8348. doi: 10.1002/cnr2.1736. Full text in Research Archive
  • Gopalakrishnan, Shyam; Ebenesersdottir, S.Sunna; Lundstrøm, Inge K.C.; Turner-Walker, Gordon; Moore, Kristjan H.S. & Luisi, Pierre [Show all 60 contributors for this article] (2022). The population genomic legacy of the second plague pandemic. Current Biology. ISSN 0960-9822. 32, p. 4743–4751. doi: 10.1016/j.cub.2022.09.023. Full text in Research Archive
  • Venizelos, Andreas; Engebrethsen, Christina; Deng, Wei; Geisler, Jürgen; Geisler, Stephanie & Iversen, Gjertrud Titlestad [Show all 18 contributors for this article] (2022). Clonal evolution in primary breast cancers under sequential epirubicin and docetaxel monotherapy. Genome Medicine. ISSN 1756-994X. 14, p. 1–18. doi: 10.1186/s13073-022-01090-2. Full text in Research Archive
  • Ellingsen, Espen Basmo; Aamdal, Elin; Guren, Tormod Kyrre; Lilleby, Wolfgang; Brunsvig, Paal Fr. & Mangsbo, Sara M [Show all 11 contributors for this article] (2022). Durable and dynamic hTERT immune responses following vaccination with the long-peptide cancer vaccine UV1: Long-Term follow-up of three phase i clinical trials. Journal for ImmunoTherapy of Cancer (JITC). 10(5), p. 1–13. doi: 10.1136/jitc-2021-004345. Full text in Research Archive
  • Misund, Kristine; Hofste op Bruinink, Davine; Coward, Eivind; Hoogenboezem, Remco M.; Rustad, Even Holth & Sanders, Mathijs A. [Show all 16 contributors for this article] (2022). Clonal evolution after treatment pressure in multiple myeloma: heterogenous genomic aberrations and transcriptomic convergence. Leukemia. ISSN 0887-6924. 36(7), p. 1887–1897. doi: 10.1038/s41375-022-01597-y. Full text in Research Archive
  • Fromm, Bastian; Høye, Eirik; Domanska, Diana; Zhong, Xiangfu; Aparicio-Puerta, Ernesto & Ovchinnikov, Vladimir [Show all 18 contributors for this article] (2022). MirGeneDB 2.1: toward a complete sampling of all major animal phyla. Nucleic Acids Research (NAR). ISSN 0305-1048. 50(D1), p. D204–D210. doi: 10.1093/nar/gkab1101. Full text in Research Archive
  • Dominguez-Valentin, Mev; Plazzer, John-Paul; Sampson, Julian R.; Engel, Christoph; Aretz, Stefan & Jenkins, Mark A. [Show all 88 contributors for this article] (2021). No difference in penetrance between truncating and missense/aberrant splicing pathogenic variants in mlh1 and msh2: A prospective lynch syndrome database study. Journal of Clinical Medicine. ISSN 2077-0383. 10(13), p. 1–12. doi: 10.3390/jcm10132856. Full text in Research Archive
  • Seppälä, Toni T.; Dominguez-Valentin, Mev; Crosbie, Emma J.; Engel, Christoph; Aretz, Stefan & Macrae, Finlay [Show all 85 contributors for this article] (2021). Uptake of hysterectomy and bilateral salpingo-oophorectomy in carriers of pathogenic mismatch repair variants: a Prospective Lynch Syndrome Database report. European Journal of Cancer. ISSN 0959-8049. 148, p. 124–133. doi: 10.1016/j.ejca.2021.02.022.
  • Gundersen, Sveinung; Boddu, Sanjay; Capella-Gutierrez, Salvador; Drabløs, Finn; Fernández, José M. & Kompova, Radmila [Show all 10 contributors for this article] (2021). Recommendations for the FAIRification of genomic track metadata. F1000 Research. ISSN 2046-1402. 10. doi: 10.12688/f1000research.28449.1. Full text in Research Archive
  • Ellingsen, Espen Basmo; Mangsbo, Sara; Hovig, Eivind & Gaudernack, Gustav (2021). Telomerase as a Target for Therapeutic Cancer Vaccines and Considerations for Optimizing Their Clinical Potential. Frontiers in Immunology. ISSN 1664-3224. 12:682492, p. 1–15. doi: 10.3389/fimmu.2021.682492. Full text in Research Archive
  • Pavlović, Milena; Scheffer, Lonneke; Motwani, Keshav; Kanduri, Chakravarthi; Kompova, Radmila & Vazov, Nikolay Aleksandrov [Show all 41 contributors for this article] (2021). The immuneML ecosystem for machine learning analysis of adaptive immune receptor repertoires. Nature Machine Intelligence. 3(11), p. 936–944. doi: 10.1038/s42256-021-00413-z.
  • Kværner, Ane Sørlie; Birkeland, Einar Elvbakken; Bucher-Johannessen, Cecilie; Vinberg, Elina; Nordby, Jan Inge & Kangas, Harri [Show all 27 contributors for this article] (2021). The CRCbiome study: a large prospective cohort study examining the role of lifestyle and the gut microbiome in colorectal cancer screening participants. BMC Cancer. ISSN 1471-2407. 21. doi: 10.1186/s12885-021-08640-8. Full text in Research Archive
  • Nakken, Sigve; Saveliev, Vladislav; Hofmann, Oliver; Møller, Pål; Myklebost, Ola & Hovig, Eivind (2021). Cancer Predisposition Sequencing Reporter (CPSR): A flexible variant report engine for high-throughput germline screening in cancer. International Journal of Cancer. ISSN 0020-7136. p. 1–6. doi: 10.1002/ijc.33749. Full text in Research Archive
  • Mattingsdal, Morten; Ebenesersdóttir, Sigríður Sunna; Moore, Kristjan H. S.; Andreassen, Ole Andreas; Hansen, Thomas F. & Werge, Thomas [Show all 12 contributors for this article] (2021). The genetic structure of Norway. European Journal of Human Genetics. ISSN 1018-4813. doi: 10.1038/s41431-021-00899-6. Full text in Research Archive
  • Nakken, Sigve; Lilleby, Wolfgang; Switlyk, Marta Daniela; Knudsen, Karen E.; Lilleby, Oscar & Zhao, Sen [Show all 10 contributors for this article] (2021). The quandary of dna-based treatment assessment in de novo metastatic prostate cancer in the era of precision oncology. Journal of Personalized Medicine. 11(5), p. 1–18. doi: 10.3390/jpm11050330. Full text in Research Archive
  • Aamdal, Elin; Inderberg, Else Marit ; Ellingsen, Espen Basmo; Rasch, Wenche; Brunsvig, Paal Fr. & Aamdal, Steinar [Show all 13 contributors for this article] (2021). Combining a universal telomerase based cancer vaccine with ipilimumab in patients with metastatic melanoma - Five-year follow up of a phase I/IIa trial. Frontiers in Immunology. ISSN 1664-3224. 12, p. 1–10. doi: 10.3389/fimmu.2021.663865. Full text in Research Archive
  • Salgado, David; Béroud, Christophe; Armean, Irina M.; Baudis, Michael; Beltran, Sergi & Capella, Salvador [Show all 42 contributors for this article] (2020). The ELIXIR Human Copy Number Variations Community: Building bioinformatics infrastructure for research. F1000. ISSN 1759-796X. 9:1229, p. 1–15. doi: 10.12688/f1000research.24887.1.
  • Dominguez-Valentin, Mev; Seppälä, Toni T.; Engel, Christoph; Aretz, Stefan; Macrae, Finlay & Winship, Ingrid [Show all 45 contributors for this article] (2020). Risk-Reducing Gynecological Surgery in Lynch Syndrome: Results of an International Survey from the Prospective Lynch Syndrome Database. Journal of Clinical Medicine. ISSN 2077-0383. 9(7). doi: 10.3390/jcm9072290.
  • Wise, Jillian; Nakken, Sigve; Steen, Chloe Beate; Vodak, Daniel; Trøen, Gunhild & Johannessen, Bjarne [Show all 24 contributors for this article] (2020). Mutational dynamics and immune evasion in diffuse large B-cell lymphoma explored in a relapse-enriched patient series. Blood Advances. ISSN 2473-9529. 4(9), p. 1859–1866. doi: 10.1182/bloodadvances.2019001325.
  • Dominguez-Valentin, Mev; Crosbie, Emma J.; Engel, Christoph; Aretz, Stefan; MacRae, Finlay & Winship, Ingrid [Show all 87 contributors for this article] (2020). Risk-reducing hysterectomy and bilateral salpingo-oophorectomy in female heterozygotes of pathogenic mismatch repair variants: a Prospective Lynch Syndrome Database report. Genetics in Medicine. ISSN 1098-3600. p. 1–8. doi: 10.1038/s41436-020-01029-1. Full text in Research Archive
  • Pace, Marta; Falappa, Matteo; Freschi, Andrea; Balzani, Edoardo; Berteotti, Chiara & Martire, Viviana Lo [Show all 13 contributors for this article] (2020). Loss of Snord116 impacts lateral hypothalamus, sleep, and food-related behaviors. JCI Insight. ISSN 2379-3708. 5(12), p. 1–18. doi: 10.1172/jci.insight.137495.
  • Zhao, Sen; Agafonov, Oleg; Azab, Abdulrahman; Stokowy, Tomasz & Hovig, Eivind (2020). Accuracy and efficiency of germline variant calling pipelines for human genome data. Scientific Reports. ISSN 2045-2322. 10:20222, p. 1–12. doi: 10.1038/s41598-020-77218-4. Full text in Research Archive
  • Olafsdottir, Elinborg J.; Borg, Åke; Jensen, Maj-Britt; Gerdes, Anne-Marie; Johansson, Anna L. V. & Barkardottir, Rosa B. [Show all 20 contributors for this article] (2020). Breast cancer survival in Nordic BRCA2 mutation carriers—unconventional association with oestrogen receptor status. British Journal of Cancer. ISSN 0007-0920. 123, p. 1608–1615. doi: 10.1038/s41416-020-01056-4.
  • Lavelle, Timothy J; Alver, Tine Norman; Heintz, Karen Marie; Wernhoff, Patrik; Nygaard, Vegard & Nakken, Sigve [Show all 10 contributors for this article] (2020). Dysregulation of MITF Leads to Transformation in MC1R-Defective Melanocytes. Cancers. ISSN 2072-6694. 12(7), p. 1–20. doi: 10.3390/cancers12071719. Full text in Research Archive
  • Ree, Anne Hansen; Nygaard, Vigdis; Pedersen, Kjetil Boye; Heinrich, Daniel; Dueland, Svein & Bergheim, Inger Riise [Show all 25 contributors for this article] (2020). Molecularly matched therapy in the context of sensitivity, resistance, and safety; patient outcomes in end-stage cancer?the MetAction study. Acta Oncologica. ISSN 0284-186X. p. 1–10. doi: 10.1080/0284186X.2020.1742377. Full text in Research Archive
  • Waaler, Jo; Mygland, Line; Tveita, Anders Aune; Strand, Martin Frank; Solberg, Nina & Olsen, Petter Angell [Show all 19 contributors for this article] (2020). Tankyrase inhibition sensitizes melanoma to PD-1 immune checkpoint blockade in syngeneic mouse models. Communications Biology. ISSN 2399-3642. 3. doi: 10.1038/s42003-020-0916-2. Full text in Research Archive
  • Tolios, Alexander; De Las Rivas, Javier; Hovig, Eivind; Trouillas, Patrick; Scorilas, Andreas & Mohr, Thomas (2020). Computational approaches in cancer multidrug resistance research: Identification of potential biomarkers, drug targets and drug-target interactions. Drug resistance updates. ISSN 1368-7646. 48:100662, p. 1–15. doi: 10.1016/j.drup.2019.100662.
  • Lund-Andersen, Christin; Nakken, Sigve; Nygård, Ståle; Fromm, Bastian; Aasheim, Lars Birger & Davidson, Ben [Show all 13 contributors for this article] (2019). Integrative genomic analysis of peritoneal malignant mesothelioma: Understanding a case with extraordinary chemotherapy response. Cold Spring Harbor Molecular Case Studies. ISSN 2373-2873. 5:a003566(2), p. 1–15. doi: 10.1101/mcs.a003566. Full text in Research Archive
  • Pashov, Anastas; Shivarov, Velizar; Hadzhieva, Maya; Kostov, Victor; Ferdinandov, Dilyan & Heintz, Karen Marie [Show all 12 contributors for this article] (2019). Diagnostic Profiling of the Human Public IgM Repertoire With Scalable Mimotope Libraries. Frontiers in Immunology. ISSN 1664-3224. 10, p. 1–14. doi: 10.3389/fimmu.2019.02796.
  • Dominguez-Valentin, Mev; Nakken, Sigve; Tubeuf, Hélène; Vodák, Daniel; Ekstrøm, Per Olaf & Nissen, Anke M. [Show all 15 contributors for this article] (2019). Results of multigene panel testing in familial cancer cases without genetic cause demonstrated by single gene testing. Scientific Reports. ISSN 2045-2322. 9:18555, p. 1–9. doi: 10.1038/s41598-019-54517-z. Full text in Research Archive
  • Fromm, Bastian; Domanska, Diana Ewa; Høye, Eirik; Ovchinnikov, Vladimir; Kang, Wenjing & Aparicio-Puerta, Ernesto [Show all 13 contributors for this article] (2019). MirGeneDB 2.0: the metazoan microRNA complement . Nucleic Acids Research (NAR). ISSN 0305-1048. 48(D1), p. D132–D141. doi: 10.1093/nar/gkz885. Full text in Research Archive
  • Della Valle, Adriana; Rossi, Benedito Mauro; Palmero, Edenir Inêz; Antelo, Marina; Vaccaro, Carlos Alberto & López-Köstner, Francisco [Show all 72 contributors for this article] (2019). A snapshot of current genetic testing practice in Lynch syndrome: The results of a representative survey of 33 Latin American existing centres/registries. European Journal of Cancer. ISSN 0959-8049. 119, p. 112–121. doi: 10.1016/j.ejca.2019.07.017.
  • Dominguez-Valentin, Mev; Sampson, Julian R.; Seppälä, Toni T.; ten Broeke, Sanne W.; Plazzer, John-Paul & Nakken, Sigve [Show all 87 contributors for this article] (2019). Cancer risks by gene, age, and gender in 6350 carriers of pathogenic mismatch repair variants: findings from the Prospective Lynch Syndrome Database. Genetics in Medicine. ISSN 1098-3600. 22, p. 15–25. doi: 10.1038/s41436-019-0596-9. Full text in Research Archive
  • Nygård, Ståle; Lingjærde, Ole Christian; Caldas, Carlos; Hovig, Eivind; Børresen-Dale, Anne-Lise & Helland, Åslaug [Show all 7 contributors for this article] (2019). PathTracer: High-sensitivity detection of differential pathway activity in tumours. Scientific Reports. ISSN 2045-2322. 9:16332, p. 1–8. doi: 10.1038/s41598-019-52529-3. Full text in Research Archive
  • Dominguez-Valentin, Mev; Seppälä, Toni T.; Sampson, Julian R.; MacRae, Finlay; Winship, Ingrid & Evans, D. Gareth [Show all 43 contributors for this article] (2019). Survival by colon cancer stage and screening interval in Lynch syndrome: A prospective Lynch syndrome database report. Hereditary Cancer in Clinical Practice. ISSN 1731-2302. 17:28, p. 1–6. doi: 10.1186/s13053-019-0127-3.
  • Ree, Anne Hansen; Nygaard, Vigdis; Russnes, Hege Elisabeth Giercksky; Heinrich, Daniel; Nygaard, Vegard & Johansen, Christin [Show all 13 contributors for this article] (2019). Responsiveness to PD-1 Blockade in End-Stage Colon Cancer with Gene Locus 9p24.1 Copy-Number Gain. Cancer immunology research. ISSN 2326-6066. 7(5), p. 701–706. doi: 10.1158/2326-6066.CIR-18-0777. Full text in Research Archive
  • Møller, Pål; Dominguez-Valentin, Mev; Rødland, Einar Andreas & Hovig, Eivind (2019). Causes for Frequent Pathogenic BRCA1 Variants Include Low Penetrance in Fertile Ages, Recurrent De-Novo Mutations and Genetic Drift. Cancers. ISSN 2072-6694. 11(2), p. 1–11. doi: 10.3390/cancers11020132.
  • Kanduri, Srinivasa Kalyana Chakravarthi; Bock, Christoph; Gundersen, Sveinung; Hovig, Eivind & Sandve, Geir Kjetil (2019). Colocalization analyses of genomic elements: approaches, recommendations and challenges. Bioinformatics. ISSN 1367-4803. 35(9), p. 1615–1624. doi: 10.1093/bioinformatics/bty835. Full text in Research Archive
  • Azab, Abdulrahman; Meling, Hein; Hovig, Eivind & Pursula, Antti (2018). Filesystem Front-end for Seamless Job Management in Sensitive Data e-Infrastructures and Cloud Federation. In Abe, Naoki; Liu, Huan; Hu, Xiaohua; Ahmed, Nesreen; Qiao, Mu; Song, Yang; Kossmann, Donald; Liu, Bing; Lee, Kisung; Tang, Jiliang; He, Jingrui & Saltz, Jeffrey (Ed.), 2018 IEEE International Conference on Big Data (Big Data), Seattle, 10-13 Dec. 2018. IEEE (Institute of Electrical and Electronics Engineers). ISSN 978-1-5386-5035-6. doi: 10.1109/BigData.2018.8622144.
  • Vaccaro, Carlos Alberto; López‐Kostner, Francisco; Della Valle, Adriana; Palmero, Edenir Inêz; Rossi, Benedito Mauro & Antelo, Marina [Show all 69 contributors for this article] (2018). From colorectal cancer pattern to the characterization of individuals at risk: Picture for genetic research in Latin America. International Journal of Cancer. ISSN 0020-7136. doi: 10.1002/ijc.31920. Full text in Research Archive
  • Møller, Pål; Seppälä, Toni T.; Bernstein, Inge; Holinski-Feder, Elke; Sala, Paulo & Evans, D. Gareth [Show all 38 contributors for this article] (2018). Cancer risk and survival in path_MMR carriers by gene and gender up to 75 years of age: a report from the Prospective Lynch Syndrome Database. Gut. ISSN 0017-5749. 67(7), p. 1306–1316. doi: 10.1136/gutjnl-2017-314057. Full text in Research Archive
  • Tekle, Kidane M; Gundersen, Sveinung; Klepper, Kjetil; Bongo, Lars Ailo; Raknes, Inge Alexander & Li, Xiaxi [Show all 22 contributors for this article] (2018). Norwegian e-Infrastructure for Life Sciences (NeLS). F1000 Research. ISSN 2046-1402. 7:968. doi: 10.5256/f1000research.16472.r35600. Full text in Research Archive
  • Ebenesersdóttir, Sigríður Sunna; Sandoval-Velasco, Marcela; Gunnarsdóttir, Ellen D.; Jagadeesan, Anuradha; Guðmundsdóttir, Valdís B. & Thordardóttir, Elísabet L. [Show all 30 contributors for this article] (2018). Ancient genomes from Iceland reveal the making of a human population. Science. ISSN 0036-8075. 360(6392), p. 1028–1032. doi: 10.1126/science.aar2625. Full text in Research Archive
  • Dominguez Valentin, Mev; Evans, D. Gareth R.; Nakken, Sigve; Tubeuf, Hélène; Vodak, Daniel & Ekstrøm, Per Olaf [Show all 12 contributors for this article] (2018). Genetic variants of prospectively demonstrated phenocopies in BRCA1/2 kindreds. Hereditary Cancer in Clinical Practice. ISSN 1731-2302. 16:4, p. 1–14. doi: 10.1186/s13053-018-0086-0. Full text in Research Archive
  • Dominguez Valentin, Mev; Nakken, Sigve; Tubeuf, Hélène; Vodak, Daniel; Ekstrøm, Per Olaf & Nissen, Anke M. [Show all 11 contributors for this article] (2018). Identification of genetic variants for clinical management of familial colorectal tumors. BMC Medical Genetics. ISSN 1471-2350. 19(1). doi: 10.1186/s12881-018-0533-9. Full text in Research Archive
  • Vodak, Daniel; Lorenz, Susanne; Nakken, Sigve; Aasheim, Lars Birger; Holte, Harald & Bai, Baoyan [Show all 9 contributors for this article] (2018). Sample-Index Misassignment Impacts Tumour Exome Sequencing. Scientific Reports. ISSN 2045-2322. 8:5307, p. 1–6. doi: 10.1038/s41598-018-23563-4. Full text in Research Archive
  • Birkeland, Einar Elvbakken; Zhang, Shan; Poduval, Deepak; Geisler, Jürgen; Nakken, Sigve & Vodak, Daniel [Show all 11 contributors for this article] (2018). Patterns of genomic evolution in advanced melanoma. Nature Communications. ISSN 2041-1723. 9:2665, p. 1–12. doi: 10.1038/s41467-018-05063-1. Full text in Research Archive
  • Clancy, Trevor; dannenfelser, ruth; Troyanskaya, Olga G.; Malmberg, Karl-Johan; Hovig, Eivind & Kristensen, Vessela N. (2017). Bioinformatics approaches to profile the tumor microenvironment for immunotherapeutic discovery. Current pharmaceutical design. ISSN 1381-6128. 23(32), p. 4716–4725. doi: 10.2174/1381612823666170710154936. Full text in Research Archive
  • Møller, Pål & Hovig, Eivind (2017). The BRCA2 variant c.68-7 T>A is associated with breast cancer. Hereditary Cancer in Clinical Practice. ISSN 1731-2302. 15(1). doi: 10.1186/s13053-017-0080-y.
  • Rossi, Benedito Mauro; Palmero, Edenir Inêz; López-Kostner, Francisco; Sarroca, Carlos; Vaccaro, Carlos Alberto & Spirandelli, Florencia [Show all 37 contributors for this article] (2017). A survey of the clinicopathological and molecular characteristics of patients with suspected Lynch syndrome in Latin America. BMC Cancer. ISSN 1471-2407. 17(623). doi: 10.1186/s12885-017-3599-4.
  • Seppälä, Toni; Pylvänäinen, Kirsi; Evans, Dafydd Gareth; Järvinen, Heikki; Renkonen-Sinisalo, Laura & Bernstein, Inge [Show all 38 contributors for this article] (2017). Colorectal cancer incidence in path_MLH1 carriers subjected to different follow-up protocols: A Prospective Lynch Syndrome Database report. Hereditary Cancer in Clinical Practice. ISSN 1731-2302. 15:18, p. 1–10. doi: 10.1186/s13053-017-0078-5. Full text in Research Archive
  • Møller, Pål; Seppälä, Toni; Bernstein, Inge; Holinski-Feder, Elke; Sala, Paola & Evans, D. Gareth [Show all 37 contributors for this article] (2017). Incidence of and survival after subsequent cancers in carriers of pathogenic MMR variants with previous cancer: A report from the prospective Lynch syndrome database. Gut. ISSN 0017-5749. 66(9), p. 1657–1664. doi: 10.1136/gutjnl-2016-311403. Full text in Research Archive
  • Dominguez Valentin, Mev; Nakken, Sigve; Tubeuf, Hélène; Vodak, Daniel; Ekstrøm, Per Olaf & Nissen, Anke M. [Show all 11 contributors for this article] (2017). Potentially pathogenic germline CHEK2 c.319+2T>A among multiple early-onset cancer families. Familial Cancer. ISSN 1389-9600. 17(1), p. 141–153. doi: 10.1007/s10689-017-0011-0.
  • Domanska, Diana Ewa; Vodak, Daniel; Christin, Lund-Andersen; Salvatore, Stefania; Hovig, Eivind & Sandve, Geir Kjetil (2017). The rainfall plot: Its motivation, characteristics and pitfalls. BMC Bioinformatics. ISSN 1471-2105. 18. doi: 10.1186/s12859-017-1679-8.
  • Helland, Åslaug; Brustugun, Odd Terje; Nakken, Sigve; Halvorsen, Ann Rita; Dønnem, Tom & Bremnes, Roy M. [Show all 15 contributors for this article] (2017). High number of kinome-mutations in non-small cell lung cancer is associated with reduced immune response and poor relapse-free survival. International Journal of Cancer. ISSN 0020-7136. 141(1), p. 184–190. doi: 10.1002/ijc.30726. Full text in Research Archive
  • Namløs, Heidi Maria; Zaikova, Olga; Bjerkehagen, Bodil; Vodak, Daniel; Hovig, Johannes Eivind & Myklebost, Ola [Show all 8 contributors for this article] (2017). Use of liquid biopsies to monitor disease progression in a sarcoma patient: a case report. BMC Cancer. ISSN 1471-2407. 17:29, p. 1–6. doi: 10.1186/s12885-016-2992-8.

View all works in Cristin

  • Przybyła, Weronika; Trøen, Gunhild; Lai, Xiaoran; Samarakoon, Pubudu Saneth; Kaveh, Fatemeh & Hovig, Eivind [Show all 8 contributors for this article] (2023). Comparative whole genome copy number analysis of disseminated tumor cells and the primary tumor in high-risk neuroblastoma.
  • Akdeniz, Bayram Cevdet ; Bøen, Rune; Frei, Oleksandr; Hovig, Eivind; Andreassen, Ole & Sønderby, Ida Elken (2022). LARGE-SCALE ANALYSIS WITH SOFTWARE CONTAINERS IN ENIGMA-CNV–AN INTERNATIONAL WORKING GROUP TO STUDY RECURRENT COPY NUMBER VARIANTS AND BRAIN MEASURES. Neuropsychopharmacology, 2022.
  • Akdeniz, Bayram Cevdet ; Mattingsdal, Morten; Dominguez Valentin, Mev; Frei, Oleksandr; Shadrin, Alexey & Puustusmaa, Mikk [Show all 11 contributors for this article] (2022). Implementation of polygenic risk score guided breast cancer prediction in Norwegian data. NSHG-PM 2022.
  • Corfield, Elizabeth Claire; Frei, Oleksandr; Shadrin, Alexey; Rahman, Zillur; Lin, Aihua & Athanasiu, Lavinia [Show all 26 contributors for this article] (2022). The Norwegian Mother, Father, and Child cohort study (MoBa) genotyping data resource: the MoBaPsychGen_v1 pipeline.
  • Tasken, Kjetil; Russnes, Hege Elisabeth Giercksky; Aas, Eline; Bjørge, Line; Blix, Egil Støre & Ahlquist, Terje C. [Show all 116 contributors for this article] (2022). A national precision cancer medicine implementation initiative for Norway. Nature Medicine. ISSN 1078-8956. 28(5), p. 885–887. doi: 10.1038/s41591-022-01777-4.
  • Helland, Åslaug; Russnes, Hege Elisabeth Giercksky; Fagereng, Gro Live; Al-Shibli, Khalid Ibrahim; Andersson, Yvonne & Berg, Thomas [Show all 53 contributors for this article] (2022). Correction to: Improving public cancer care by implementing precision medicine in Norway: IMPRESS-Norway (Journal of Translational Medicine, (2022), 20, 1, (225), 10.1186/s12967-022-03432-5). Journal of Translational Medicine. ISSN 1479-5876. 20(1). doi: 10.1186/s12967-022-03518-0.
  • Helland, Åslaug; Russnes, Hege Elisabeth Giercksky; Fagereng, Gro Live; Al-Shibli, Khalid Ibrahim; Andersson, Yvonne & Berg, Thomas [Show all 53 contributors for this article] (2022). Improving public cancer care by implementing precision medicine in Norway: IMPRESS-Norway. Journal of Translational Medicine. ISSN 1479-5876. 20(1), p. 1–11. doi: 10.1186/s12967-022-03432-5. Full text in Research Archive
  • Dominguez-Valentin, Mev; Sampson, Julian R.; Møller, Pål; Seppälä, Toni T.; Plazzer, John-Paul & Nakken, Sigve [Show all 88 contributors for this article] (2021). Analysis in the Prospective Lynch Syndrome Database identifies sarcoma as part of the Lynch syndrome tumor spectrum. International Journal of Cancer. ISSN 0020-7136. 148(2), p. 512–513. doi: 10.1002/ijc.33214.
  • Kanduri, Chakravarthi; Sandve, Geir Kjetil Ferkingstad; Hovig, Eivind; De, Subhajyoti & Layer, Ryan (2021). Editorial: Genomic Colocalization and Enrichment Analyses. Frontiers in Genetics. ISSN 1664-8021. 11. doi: 10.3389/fgene.2020.617876.
  • Stansberg, Christine; Hovig, Eivind; Willassen, Nils Peder & Jonassen, Inge (2021). Det er arbeidskrevende å gjøre data delbare! Khrono.no. ISSN 1894-8995.
  • Dominguez-Valentin, Mev; Sampson, Julian R.; Seppälä, Toni T.; ten Broeke, Sanne W.; Plazzer, John-Paul & Nakken, Sigve [Show all 87 contributors for this article] (2020). Correction: Cancer risks by gene, age, and gender in 6350 carriers of pathogenic mismatch repair variants: findings from the Prospective Lynch Syndrome Database (Genetics in Medicine, (2020), 22, 1, (15-25), 10.1038/s41436-019-0596-9). Genetics in Medicine. ISSN 1098-3600. 22(9). doi: 10.1038/s41436-020-0892-4.
  • Møller, Pål; Dominguez-Valentin, Mev; Rødland, Einar Andreas & Hovig, Eivind (2020). Correction: Causes for frequent pathogenic brca1 variants include low penetrance in fertile ages, recurrent de-novo mutations and genetic drift (Cancers, (2019), 11, 132, 10.3390/cancers11020132). Cancers. ISSN 2072-6694. 12(2). doi: 10.3390/cancers12020410.
  • Fromm, Bastian; Domanska, Diana; Høye, Eirik; Ovchinnikov, Vladimir; Kang, Wenjing & Aparicio-Puerta, Ernesto [Show all 13 contributors for this article] (2020). Erratum: MirGeneDB 2.0: The metazoan microRNA complement (Nucleic Acids Research (2019) DOI: 10.1093/nar/gkz885). Nucleic Acids Research (NAR). ISSN 0305-1048. 48(1). doi: 10.1093/nar/gkz1016.
  • Stansberg, Christine; Willassen, Nils P; Thomassen, Gard O Sundby; Hovig, Johannes Eivind & Jonassen, Inge (2020). How open databases turn out to be crucial in the fight against Covid-19. NBS-nytt. ISSN 0801-3535. 4, p. 38–43.
  • Bösl, Korbinian; Ghavidel, Fatemeh; Tekle, Kidane M; Kleppe, Rune; Hjerde, Erik & Drabløs, Finn [Show all 11 contributors for this article] (2020). End-to-End Data Management Toolkit for Norwegian Life Scientists.
  • Rye, Morten Beck; Nygård, Ståle; Drabløs, Finn; Petersen, Kjell; Våge, Dag Inge & Willassen, Nils Peder [Show all 8 contributors for this article] (2019). ELIXIR.NO - The national infrastructure of bioinformatics.
  • Bai, Baoyan; Vodák, Daniel; Nakken, Sigve; Wise, Jillian; Blaker, Yngvild Nuvin & Lingjærde, Ole Christian [Show all 18 contributors for this article] (2019). Deep profiling of genetic aberrations and clonal evolution in follicular lymphoma. Blood. ISSN 0006-4971. 134(1), p. 20–20. doi: 10.1182/blood-2019-128403.
  • Møller, Pål & Hovig, Eivind (2018). Retraction Note to: The BRCA2 variant c.68–7 T > A is associated with breast cancer. Hereditary Cancer in Clinical Practice. ISSN 1731-2302. 16(1). doi: 10.1186/s13053-018-0093-1.
  • Nakken, Sigve; Fournous, Ghislain; Vodak, Daniel; Aasheim, Lars Birger; Myklebost, Ola & Hovig, Eivind (2018). Personal Cancer Genome Reporter: Variant interpretation report for precision oncology. Bioinformatics. ISSN 1367-4803. 34(10), p. 1778–1780. doi: 10.1093/bioinformatics/btx817. Full text in Research Archive
  • Drabløs, Finn; Nygård, Ståle; Petersen, Kjell; Våge, Dag Inge; Willassen, Nils Peder & Hovig, Eivind [Show all 7 contributors for this article] (2017). ELIXIR.NO - The national infrastructure for bioinformatics.
  • Kanduri, Chakravarthi; Domanska, Diana; Hovig, Eivind & Sandve, Geir Kjetil (2017). Genome build information is an essential part of genomic track files. Genome Biology. ISSN 1465-6906. 18(1). doi: 10.1186/s13059-017-1312-1.
  • Misund, Kristine; Hofste op Bruinink, Davine; Coward, Eivind; Hoogenboezem, Remco; Rustad, Even Holth & Hovig, Eivind [Show all 10 contributors for this article] (2017). Detection of mutations in Multiple Myeloma during different stages of disease.
  • Møller, Pål & Hovig, Eivind (2017). Our genes, our selves: hereditary breast cancer and biological citizenship in Norway. Medicine, Health care and Philosophy. ISSN 1386-7423. Published ahead of print, p. 1–4. doi: 10.1007/s11019-017-9803-0.
  • Corfield, Elizabeth Claire; Frei, Oleksandr; Shadrin, Alexey; Rahman, Zillur; Lin, Aihua & Athanasiu, Lavinia [Show all 26 contributors for this article] (2022). The Norwegian Mother, Father, and Child cohort study (MoBa) genotyping data resource: MoBaPsychGen pipeline v.1. Cold Spring Harbor Laboratory Press (CSHL). ISSN 2692-8205. (2022).

View all works in Cristin

Published Nov. 4, 2010 1:58 PM - Last modified Dec. 13, 2022 9:42 AM