Eivind Hovig

Bilde av Eivind Hovig
English version of this page
Telefon +47 22858504
Rom 4417
Brukernavn
Besøksadresse Gaustadalleen 23 B Ole Johan Dahls hus 0373 Oslo
Postadresse Postboks 1080, Blindern 0316 Oslo
Emneord: Livsvitenskap, Bioinformatikk

Publikasjoner

  • Gundersen, Sveinung; Boddu, Sanjay; Capella-Gutierrez, Salvador; Drabløs, Finn; Fernández, José M. & Kompova, Radmila [Vis alle 10 forfattere av denne artikkelen] (2021). Recommendations for the FAIRification of genomic track metadata. F1000. ISSN 1759-796X. 10. doi: 10.12688/f1000research.28449.1.
  • Ellingsen, Espen Basmo; Mangsbo, Sara; Hovig, Eivind & Gaudernack, Gustav (2021). Telomerase as a Target for Therapeutic Cancer Vaccines and Considerations for Optimizing Their Clinical Potential. Frontiers in Immunology. ISSN 1664-3224. 12:682492, s. 1–15. doi: 10.3389/fimmu.2021.682492.
  • Pavlović, Milena; Scheffer, Lonneke; Motwani, Keshav; Kanduri, Chakravarthi; Kompova, Radmila & Vazov, Nikolay Aleksandrov [Vis alle 41 forfattere av denne artikkelen] (2021). The immuneML ecosystem for machine learning analysis of adaptive immune receptor repertoires. Nature Machine Intelligence. 3, s. 936–944. doi: 10.1038/s42256-021-00413-z.
  • Kværner, Ane Sørlie; Birkeland, Einar Elvbakken; Bucher-Johannessen, Cecilie; Vinberg, Elina; Nordby, Jan Inge & Kangas, Harri [Vis alle 27 forfattere av denne artikkelen] (2021). The CRCbiome study: a large prospective cohort study examining the role of lifestyle and the gut microbiome in colorectal cancer screening participants. BMC Cancer. ISSN 1471-2407. 21. doi: 10.1186/s12885-021-08640-8. Fulltekst i vitenarkiv
  • Mattingsdal, Morten; Ebenesersdóttir, Sigríður Sunna; Moore, Kristjan H. S.; Andreassen, Ole Andreas; Hansen, Thomas F. & Werge, Thomas [Vis alle 12 forfattere av denne artikkelen] (2021). The genetic structure of Norway. European Journal of Human Genetics. ISSN 1018-4813. doi: 10.1038/s41431-021-00899-6. Fulltekst i vitenarkiv
  • Nakken, Sigve; Lilleby, Wolfgang; Switlyk, Marta Daniela; Knudsen, Karen E.; Lilleby, Oscar & Zhao, Sen [Vis alle 10 forfattere av denne artikkelen] (2021). The quandary of dna-based treatment assessment in de novo metastatic prostate cancer in the era of precision oncology. Journal of Personalized Medicine. 11(5), s. 1–18. doi: 10.3390/jpm11050330.
  • Aamdal, Elin; Inderberg, Else Marit ; Ellingsen, Espen Basmo; Rasch, Wenche; Brunsvig, Paal Fr. & Aamdal, Steinar [Vis alle 13 forfattere av denne artikkelen] (2021). Combining a universal telomerase based cancer vaccine with ipilimumab in patients with metastatic melanoma - Five-year follow up of a phase I/IIa trial. Frontiers in Immunology. ISSN 1664-3224. 12:663865, s. 1–10. doi: 10.3389/fimmu.2021.663865. Fulltekst i vitenarkiv
  • Dominguez-Valentin, Mev; Seppälä, Toni T.; Engel, Christoph; Aretz, Stefan; Macrae, Finlay & Winship, Ingrid [Vis alle 45 forfattere av denne artikkelen] (2020). Risk-Reducing Gynecological Surgery in Lynch Syndrome: Results of an International Survey from the Prospective Lynch Syndrome Database. Journal of Clinical Medicine. ISSN 2077-0383. 9(7). doi: 10.3390/jcm9072290.
  • Wise, Jillian; Nakken, Sigve; Steen, Chloe Beate; Vodak, Daniel; Trøen, Gunhild & Johannessen, Bjarne [Vis alle 24 forfattere av denne artikkelen] (2020). Mutational dynamics and immune evasion in diffuse large B-cell lymphoma explored in a relapse-enriched patient series. Blood Advances. ISSN 2473-9529. 4(9), s. 1859–1866. doi: 10.1182/bloodadvances.2019001325.
  • Dominguez-Valentin, Mev; Crosbie, Emma J.; Engel, Christoph; Aretz, Stefan; MacRae, Finlay & Winship, Ingrid [Vis alle 87 forfattere av denne artikkelen] (2020). Risk-reducing hysterectomy and bilateral salpingo-oophorectomy in female heterozygotes of pathogenic mismatch repair variants: a Prospective Lynch Syndrome Database report. Genetics in Medicine. ISSN 1098-3600. s. 1–8. doi: 10.1038/s41436-020-01029-1. Fulltekst i vitenarkiv
  • Pace, Marta; Falappa, Matteo; Freschi, Andrea; Balzani, Edoardo; Berteotti, Chiara & Martire, Viviana Lo [Vis alle 13 forfattere av denne artikkelen] (2020). Loss of Snord116 impacts lateral hypothalamus, sleep, and food-related behaviors. JCI Insight. ISSN 2379-3708. 5(12), s. 1–18. doi: 10.1172/jci.insight.137495.
  • Zhao, Sen; Agafonov, Oleg; Azab, Abdulrahman; Stokowy, Tomasz & Hovig, Eivind (2020). Accuracy and efficiency of germline variant calling pipelines for human genome data. Scientific Reports. ISSN 2045-2322. 10:20222, s. 1–12. doi: 10.1038/s41598-020-77218-4. Fulltekst i vitenarkiv
  • Olafsdottir, Elinborg J.; Borg, Åke; Jensen, Maj-Britt; Gerdes, Anne-Marie; Johansson, Anna L. V. & Barkardottir, Rosa B. [Vis alle 20 forfattere av denne artikkelen] (2020). Breast cancer survival in Nordic BRCA2 mutation carriers—unconventional association with oestrogen receptor status. British Journal of Cancer. ISSN 0007-0920. 123, s. 1608–1615. doi: 10.1038/s41416-020-01056-4.
  • Lavelle, Timothy J; Alver, Tine Norman; Heintz, Karen Marie; Wernhoff, Patrik; Nygaard, Vegard & Nakken, Sigve [Vis alle 10 forfattere av denne artikkelen] (2020). Dysregulation of MITF Leads to Transformation in MC1R-Defective Melanocytes. Cancers. ISSN 2072-6694. 12(7), s. 1–20. doi: 10.3390/cancers12071719. Fulltekst i vitenarkiv
  • Ree, Anne Hansen; Nygaard, Vigdis; Pedersen, Kjetil Boye; Heinrich, Daniel; Dueland, Svein & Bergheim, Inger Riise [Vis alle 25 forfattere av denne artikkelen] (2020). Molecularly matched therapy in the context of sensitivity, resistance, and safety; patient outcomes in end-stage cancer?the MetAction study. Acta Oncologica. ISSN 0284-186X. s. 1–10. doi: 10.1080/0284186X.2020.1742377. Fulltekst i vitenarkiv
  • Waaler, Jo; Mygland, Line; Tveita, Anders Aune; Strand, Martin Frank; Solberg, Nina & Olsen, Petter Angell [Vis alle 19 forfattere av denne artikkelen] (2020). Tankyrase inhibition sensitizes melanoma to PD-1 immune checkpoint blockade in syngeneic mouse models. Communications Biology. ISSN 2399-3642. 3. doi: 10.1038/s42003-020-0916-2. Fulltekst i vitenarkiv
  • Tolios, Alexander; De Las Rivas, Javier; Hovig, Eivind; Trouillas, Patrick; Scorilas, Andreas & Mohr, Thomas (2020). Computational approaches in cancer multidrug resistance research: Identification of potential biomarkers, drug targets and drug-target interactions. Drug resistance updates. ISSN 1368-7646. 48:100662, s. 1–15. doi: 10.1016/j.drup.2019.100662.
  • Lund-Andersen, Christin; Nakken, Sigve; Nygård, Ståle; Fromm, Bastian; Aasheim, Lars Birger & Davidson, Ben [Vis alle 13 forfattere av denne artikkelen] (2019). Integrative genomic analysis of peritoneal malignant mesothelioma: Understanding a case with extraordinary chemotherapy response. Cold Spring Harbor Molecular Case Studies. ISSN 2373-2873. 5:a003566(2), s. 1–15. doi: 10.1101/mcs.a003566. Fulltekst i vitenarkiv
  • Pashov, Anastas; Shivarov, Velizar; Hadzhieva, Maya; Kostov, Victor; Ferdinandov, Dilyan & Heintz, Karen Marie [Vis alle 12 forfattere av denne artikkelen] (2019). Diagnostic Profiling of the Human Public IgM Repertoire With Scalable Mimotope Libraries. Frontiers in Immunology. ISSN 1664-3224. 10, s. 1–14. doi: 10.3389/fimmu.2019.02796.
  • Dominguez-Valentin, Mev; Nakken, Sigve; Tubeuf, Hélène; Vodák, Daniel; Ekstrøm, Per Olaf & Nissen, Anke M. [Vis alle 15 forfattere av denne artikkelen] (2019). Results of multigene panel testing in familial cancer cases without genetic cause demonstrated by single gene testing. Scientific Reports. ISSN 2045-2322. 9:18555, s. 1–9. doi: 10.1038/s41598-019-54517-z. Fulltekst i vitenarkiv
  • Fromm, Bastian; Domanska, Diana Ewa; Høye, Eirik; Ovchinnikov, Vladimir; Kang, Wenjing & Aparicio-Puerta, Ernesto [Vis alle 13 forfattere av denne artikkelen] (2019). MirGeneDB 2.0: the metazoan microRNA complement . Nucleic Acids Research (NAR). ISSN 0305-1048. 48(D1), s. D132–D141. doi: 10.1093/nar/gkz885. Fulltekst i vitenarkiv
  • Della Valle, Adriana; Rossi, Benedito Mauro; Palmero, Edenir Inêz; Antelo, Marina; Vaccaro, Carlos Alberto & López-Köstner, Francisco [Vis alle 72 forfattere av denne artikkelen] (2019). A snapshot of current genetic testing practice in Lynch syndrome: The results of a representative survey of 33 Latin American existing centres/registries. European Journal of Cancer. ISSN 0959-8049. 119, s. 112–121. doi: 10.1016/j.ejca.2019.07.017.
  • Dominguez-Valentin, Mev; Sampson, Julian R.; Seppälä, Toni T.; ten Broeke, Sanne W.; Plazzer, John-Paul & Nakken, Sigve [Vis alle 87 forfattere av denne artikkelen] (2019). Cancer risks by gene, age, and gender in 6350 carriers of pathogenic mismatch repair variants: findings from the Prospective Lynch Syndrome Database. Genetics in Medicine. ISSN 1098-3600. 22, s. 15–25. doi: 10.1038/s41436-019-0596-9. Fulltekst i vitenarkiv
  • Nygård, Ståle; Lingjærde, Ole Christian; Caldas, Carlos; Hovig, Eivind; Børresen-Dale, Anne-Lise & Helland, Åslaug [Vis alle 7 forfattere av denne artikkelen] (2019). PathTracer: High-sensitivity detection of differential pathway activity in tumours. Scientific Reports. ISSN 2045-2322. 9:16332, s. 1–8. doi: 10.1038/s41598-019-52529-3. Fulltekst i vitenarkiv
  • Dominguez-Valentin, Mev; Seppälä, Toni T.; Sampson, Julian R.; MacRae, Finlay; Winship, Ingrid & Evans, D. Gareth [Vis alle 43 forfattere av denne artikkelen] (2019). Survival by colon cancer stage and screening interval in Lynch syndrome: A prospective Lynch syndrome database report. Hereditary Cancer in Clinical Practice. ISSN 1731-2302. 17:28, s. 1–6. doi: 10.1186/s13053-019-0127-3.
  • Seppälä, Toni T.; Ahadova, Aysel; Dominguez-Valentin, Mev; Macrae, Finlay; Evans, D. Gareth & Therkildsen, Christina [Vis alle 57 forfattere av denne artikkelen] (2019). Lack of association between screening interval and cancer stage in Lynch syndrome may be accounted for by over-diagnosis; A prospective Lynch syndrome database report. Hereditary Cancer in Clinical Practice. ISSN 1731-2302. 17:8, s. 1–8. doi: 10.1186/s13053-019-0106-8.
  • Ree, Anne Hansen; Nygaard, Vigdis; Russnes, Hege Elisabeth Giercksky; Heinrich, Daniel; Nygaard, Vegard & Johansen, Christin [Vis alle 13 forfattere av denne artikkelen] (2019). Responsiveness to PD-1 Blockade in End-Stage Colon Cancer with Gene Locus 9p24.1 Copy-Number Gain. Cancer immunology research. ISSN 2326-6066. 7(5), s. 701–706. doi: 10.1158/2326-6066.CIR-18-0777. Fulltekst i vitenarkiv
  • Møller, Pål; Dominguez-Valentin, Mev; Rødland, Einar Andreas & Hovig, Eivind (2019). Causes for Frequent Pathogenic BRCA1 Variants Include Low Penetrance in Fertile Ages, Recurrent De-Novo Mutations and Genetic Drift. Cancers. ISSN 2072-6694. 11(2), s. 1–11. doi: 10.3390/cancers11020132.
  • Kanduri, Srinivasa Kalyana Chakravarthi; Bock, Christoph; Gundersen, Sveinung; Hovig, Eivind & Sandve, Geir Kjetil (2019). Colocalization analyses of genomic elements: approaches, recommendations and challenges. Bioinformatics. ISSN 1367-4803. 35(9), s. 1615–1624. doi: 10.1093/bioinformatics/bty835. Fulltekst i vitenarkiv
  • Azab, Abdulrahman; Meling, Hein; Hovig, Eivind & Pursula, Antti (2018). Filesystem Front-end for Seamless Job Management in Sensitive Data e-Infrastructures and Cloud Federation. I Abe, Naoki; Liu, Huan; Hu, Xiaohua; Ahmed, Nesreen; Qiao, Mu; Song, Yang; Kossmann, Donald; Liu, Bing; Lee, Kisung; Tang, Jiliang; He, Jingrui & Saltz, Jeffrey (Red.), 2018 IEEE International Conference on Big Data (Big Data), Seattle, 10-13 Dec. 2018. IEEE. ISSN 978-1-5386-5035-6. doi: 10.1109/BigData.2018.8622144.
  • Vaccaro, Carlos Alberto; López‐Kostner, Francisco; Della Valle, Adriana; Palmero, Edenir Inêz; Rossi, Benedito Mauro & Antelo, Marina [Vis alle 69 forfattere av denne artikkelen] (2018). From colorectal cancer pattern to the characterization of individuals at risk: Picture for genetic research in Latin America. International Journal of Cancer. ISSN 0020-7136. doi: 10.1002/ijc.31920. Fulltekst i vitenarkiv
  • Møller, Pål; Seppälä, Toni T.; Bernstein, Inge; Holinski-Feder, Elke; Sala, Paulo & Evans, D. Gareth [Vis alle 38 forfattere av denne artikkelen] (2018). Cancer risk and survival in path_MMR carriers by gene and gender up to 75 years of age: a report from the Prospective Lynch Syndrome Database. Gut. ISSN 0017-5749. 67(7), s. 1306–1316. doi: 10.1136/gutjnl-2017-314057. Fulltekst i vitenarkiv
  • Tekle, Kidane M; Gundersen, Sveinung; Klepper, Kjetil; Bongo, Lars Ailo; Raknes, Inge Alexander & Li, Xiaxi [Vis alle 22 forfattere av denne artikkelen] (2018). Norwegian e-Infrastructure for Life Sciences (NeLS). F1000 Research. ISSN 2046-1402. 7:968. doi: 10.5256/f1000research.16472.r35600. Fulltekst i vitenarkiv
  • Ebenesersdóttir, Sigríður Sunna; Sandoval-Velasco, Marcela; Gunnarsdóttir, Ellen D.; Jagadeesan, Anuradha; Guðmundsdóttir, Valdís B. & Thordardóttir, Elísabet L. [Vis alle 30 forfattere av denne artikkelen] (2018). Ancient genomes from Iceland reveal the making of a human population. Science. ISSN 0036-8075. 360(6392), s. 1028–1032. doi: 10.1126/science.aar2625. Fulltekst i vitenarkiv
  • Dominguez Valentin, Mev; Evans, D. Gareth R.; Nakken, Sigve; Tubeuf, Hélène; Vodak, Daniel & Ekstrøm, Per Olaf [Vis alle 12 forfattere av denne artikkelen] (2018). Genetic variants of prospectively demonstrated phenocopies in BRCA1/2 kindreds. Hereditary Cancer in Clinical Practice. ISSN 1731-2302. 16:4, s. 1–14. doi: 10.1186/s13053-018-0086-0. Fulltekst i vitenarkiv
  • Dominguez Valentin, Mev; Nakken, Sigve; Tubeuf, Hélène; Vodak, Daniel; Ekstrøm, Per Olaf & Nissen, Anke M. [Vis alle 11 forfattere av denne artikkelen] (2018). Identification of genetic variants for clinical management of familial colorectal tumors. BMC Medical Genetics. ISSN 1471-2350. 19(1). doi: 10.1186/s12881-018-0533-9. Fulltekst i vitenarkiv
  • Vodak, Daniel; Lorenz, Susanne; Nakken, Sigve; Aasheim, Lars Birger; Holte, Harald & Bai, Baoyan [Vis alle 9 forfattere av denne artikkelen] (2018). Sample-Index Misassignment Impacts Tumour Exome Sequencing. Scientific Reports. ISSN 2045-2322. 8:5307, s. 1–6. doi: 10.1038/s41598-018-23563-4. Fulltekst i vitenarkiv
  • Birkeland, Einar Elvbakken; Zhang, Shan; Poduval, Deepak; Geisler, Jürgen; Nakken, Sigve & Vodak, Daniel [Vis alle 11 forfattere av denne artikkelen] (2018). Patterns of genomic evolution in advanced melanoma. Nature Communications. ISSN 2041-1723. 9:2665, s. 1–12. doi: 10.1038/s41467-018-05063-1. Fulltekst i vitenarkiv
  • Clancy, Trevor; dannenfelser, ruth; Troyanskaya, Olga G.; Malmberg, Karl-Johan; Hovig, Eivind & Kristensen, Vessela N. (2017). Bioinformatics approaches to profile the tumor microenvironment for immunotherapeutic discovery. Current pharmaceutical design. ISSN 1381-6128. 23(32), s. 4716–4725. doi: 10.2174/1381612823666170710154936. Fulltekst i vitenarkiv
  • Møller, Pål & Hovig, Eivind (2017). The BRCA2 variant c.68-7 T>A is associated with breast cancer. Hereditary Cancer in Clinical Practice. ISSN 1731-2302. 15(1). doi: 10.1186/s13053-017-0080-y.
  • Rossi, Benedito Mauro; Palmero, Edenir Inêz; López-Kostner, Francisco; Sarroca, Carlos; Vaccaro, Carlos Alberto & Spirandelli, Florencia [Vis alle 37 forfattere av denne artikkelen] (2017). A survey of the clinicopathological and molecular characteristics of patients with suspected Lynch syndrome in Latin America. BMC Cancer. ISSN 1471-2407. 17(623). doi: 10.1186/s12885-017-3599-4.
  • Seppälä, Toni; Pylvänäinen, Kirsi; Evans, Dafydd Gareth; Järvinen, Heikki; Renkonen-Sinisalo, Laura & Bernstein, Inge [Vis alle 38 forfattere av denne artikkelen] (2017). Colorectal cancer incidence in path_MLH1 carriers subjected to different follow-up protocols: A Prospective Lynch Syndrome Database report. Hereditary Cancer in Clinical Practice. ISSN 1731-2302. 15:18, s. 1–10. doi: 10.1186/s13053-017-0078-5. Fulltekst i vitenarkiv
  • Møller, Pål; Seppälä, Toni; Bernstein, Inge; Holinski-Feder, Elke; Sala, Paola & Evans, D. Gareth [Vis alle 37 forfattere av denne artikkelen] (2017). Incidence of and survival after subsequent cancers in carriers of pathogenic MMR variants with previous cancer: A report from the prospective Lynch syndrome database. Gut. ISSN 0017-5749. 66(9), s. 1657–1664. doi: 10.1136/gutjnl-2016-311403. Fulltekst i vitenarkiv
  • Dominguez Valentin, Mev; Nakken, Sigve; Tubeuf, Hélène; Vodak, Daniel; Ekstrøm, Per Olaf & Nissen, Anke M. [Vis alle 11 forfattere av denne artikkelen] (2017). Potentially pathogenic germline CHEK2 c.319+2T>A among multiple early-onset cancer families. Familial Cancer. ISSN 1389-9600. 17(1), s. 141–153. doi: 10.1007/s10689-017-0011-0.
  • Domanska, Diana Ewa; Vodak, Daniel; Christin, Lund-Andersen; Salvatore, Stefania; Hovig, Eivind & Sandve, Geir Kjetil (2017). The rainfall plot: Its motivation, characteristics and pitfalls. BMC Bioinformatics. ISSN 1471-2105. 18. doi: 10.1186/s12859-017-1679-8.
  • Helland, Åslaug; Brustugun, Odd Terje; Nakken, Sigve; Halvorsen, Ann Rita; Dønnem, Tom & Bremnes, Roy M. [Vis alle 15 forfattere av denne artikkelen] (2017). High number of kinome-mutations in non-small cell lung cancer is associated with reduced immune response and poor relapse-free survival. International Journal of Cancer. ISSN 0020-7136. 141(1), s. 184–190. doi: 10.1002/ijc.30726. Fulltekst i vitenarkiv
  • Namløs, Heidi Maria; Zaikova, Olga; Bjerkehagen, Bodil; Vodak, Daniel; Hovig, Johannes Eivind & Myklebost, Ola [Vis alle 8 forfattere av denne artikkelen] (2017). Use of liquid biopsies to monitor disease progression in a sarcoma patient: a case report. BMC Cancer. ISSN 1471-2407. 17:29, s. 1–6. doi: 10.1186/s12885-016-2992-8.
  • Ree, Anne Hansen; Russnes, Hege Elisabeth Giercksky; Heinrich, Daniel; Dueland, Svein; Pedersen, Kjetil Boye & Nygaard, Vigdis [Vis alle 33 forfattere av denne artikkelen] (2017). Implementing precision cancer medicine in the public health services of Norway: the diagnostic infrastructure and a cost estimate. ESMO Open. ISSN 2059-7029. 2(2), s. 1–10. doi: 10.1136/esmoopen-2017-000158. Fulltekst i vitenarkiv
  • Simovski, Boris; Vodak, Daniel; Gundersen, Sveinung; Domanska, Diana Ewa; Azab, Abdulrahman & Holden, Lars [Vis alle 25 forfattere av denne artikkelen] (2017). GSuite HyperBrowser: integrative analysis of dataset collections across the genome and epigenome. GigaScience. ISSN 2047-217X. 6(7), s. 1–12. doi: 10.1093/gigascience/gix032. Fulltekst i vitenarkiv
  • Meisal, Roger; Rounge, Trine Ballestad; Christiansen, Irene Kraus; Eieland, Alexander Kirkeby; Worren, Merete Molton & Molden, Tor [Vis alle 10 forfattere av denne artikkelen] (2017). HPV Genotyping of Modified General Primer-Amplicons Is More Analytically Sensitive and Specific by Sequencing than by Hybridization. PLOS ONE. ISSN 1932-6203. 12(1). doi: 10.1371/journal.pone.0169074. Fulltekst i vitenarkiv
  • Clancy, Trevor & Hovig, Eivind (2016). Profiling networks of distinct immune-cells in tumors. BMC Bioinformatics. ISSN 1471-2105. 17(1). doi: 10.1186/s12859-016-1141-3.
  • Di Stefano, Marco; Paulsen, Jonas; Lien, Tonje Gulbrandsen; Hovig, Johannes Eivind & Micheletti, Cristian (2016). Hi-C-constrained physical models of human chromosomes recover functionally-related properties of genome organization. Scientific Reports. ISSN 2045-2322. 6. doi: 10.1038/srep35985.
  • Alver, Tine Norman; Lavelle, Timothy J; Longva, Ane Sager; Øy, Geir Frode; Hovig, Johannes Eivind & Bøe, Sigurd (2016). MITF depletion elevates expression levels of ERBB3 receptor and its cognate ligand NRG1-beta in melanoma. OncoTarget. ISSN 1949-2553. 7(34), s. 55128–55140. doi: 10.18632/oncotarget.10422.
  • Haugvik, Sven-Petter; Vodak, Daniel; Haugom, Lisbeth; Hovig, Johannes Eivind; Gladhaug, Ivar Prydz & Heim, Sverre [Vis alle 7 forfattere av denne artikkelen] (2016). Transcriptomic Profiling of Tumor Aggressiveness in Sporadic Nonfunctioning Pancreatic Neuroendocrine Neoplasms. Pancreas. ISSN 0885-3177. 45(8), s. 1196–1203. doi: 10.1097/MPA.0000000000000610.
  • Børnich, Claus; Grytten, Ivar; Hovig, Johannes Eivind; Paulsen, Jonas; Cech, Martin & Sandve, Geir Kjetil (2016). Galaxy Portal: Interacting with the galaxy platform through mobile devices. Bioinformatics. ISSN 1367-4803. 32(11), s. 1743–1745. doi: 10.1093/bioinformatics/btw042.
  • Haakensen, Vilde Drageset; Nygaard, Vegard; Greger, Liliana; Aure, Miriam Ragle; Fromm, Bastian & Bukholm, Ida Rashida Khan [Vis alle 15 forfattere av denne artikkelen] (2016). Subtype-specific micro-RNA expression signatures in breast cancer progression. International Journal of Cancer. ISSN 0020-7136. 139(5), s. 1117–1128. doi: 10.1002/ijc.30142.
  • Björklund, Andreas T.; Clancy, Trevor; Goodridge, Jodie; Béziat, Vivien; Schaffer, Marie & Hovig, Johannes Eivind [Vis alle 9 forfattere av denne artikkelen] (2016). Naive donor NK cell repertoires associated with less leukemia relapse after allogeneic hematopoietic stem cell transplantation. Journal of Immunology. ISSN 0022-1767. 196(3), s. 1400–1411. doi: 10.4049/jimmunol.1501434.
  • Späth, Florentin; Andersson, Ulrika; Dahlin, Anna M; Langseth, Hilde; Hovig, Johannes Eivind & Johannesen, Tom Børge [Vis alle 10 forfattere av denne artikkelen] (2016). Pre-diagnostic serum levels of EGFR and ErbB2 and genetic glioma risk variants: a nested case-control study. Tumour Biology. ISSN 1010-4283. 37(8), s. 11065–11072. doi: 10.1007/s13277-015-4742-y.
  • Halvorsen, Ann Rita; Silwal-Pandit, Laxmi; Meza, Leonardo Zepeda; Vodak, Daniel; Vu, Phuong Ngoc Thi & Sagerup, Camilla Maria Troøien [Vis alle 11 forfattere av denne artikkelen] (2016). TP53 mutation spectrum in smokers and never smoking lung cancer patients. Frontiers in Genetics. ISSN 1664-8021. 7(MAY). doi: 10.3389/fgene.2016.00085.
  • Nygaard, Vegard; Rødland, Einar Andreas & Hovig, Johannes Eivind (2016). Methods that remove batch effects while retaining group differences may lead to exaggerated confidence in downstream analyses. Biostatistics. ISSN 1465-4644. 17(1), s. 29–39. doi: 10.1093/biostatistics/kxv027.
  • Heramb, Cecilie; Ekstrøm, Per Olaf; Tharmaratnam, Kukatharmini; Hovig, Johannes Eivind; Møller, Pål & Mæhle, Lovise Olaug (2015). Ten modifiers of BRCA1 penetrance validated in a Norwegian series. Hereditary Cancer in Clinical Practice. ISSN 1731-2302. 13:14, s. 1–12. doi: 10.1186/s13053-015-0035-0.
  • Alioto, Tyler S.; Buchhalter, Ivo; Derdak, Sophia; Hutter, Barbara; Eldridge, Matthew D. & Hovig, Johannes Eivind [Vis alle 83 forfattere av denne artikkelen] (2015). A comprehensive assessment of somatic mutation detection in cancer using whole-genome sequencing. Nature Communications. ISSN 2041-1723. 6:10001. doi: 10.1038/ncomms10001.
  • Fromm, Bastian; Billipp, Tyler; Peck, Liam E.; Johansen, Morten; Tarver, James E. & King, Benjamin L. [Vis alle 11 forfattere av denne artikkelen] (2015). A Uniform System for the Annotation of Vertebrate microRNA Genes and the Evolution of the Human microRNAome. Annual Review of Genetics. ISSN 0066-4197. 49, s. 213–242. doi: 10.1146/annurev-genet-120213-092023.
  • Ekstrøm, Per Olaf; Nakken, Sigve; Johansen, Morten & Hovig, Johannes Eivind (2015). Automated amplicon design suitable for analysis of DNA variants by melting techniques. BMC Research Notes. ISSN 1756-0500. 8(1). doi: 10.1186/s13104-015-1624-8.
  • Wibom, Carl; Späth, Florentin; Dahlin, Anna M.; Langseth, Hilde; Hovig, Johannes Eivind & Rajaraman, Preetha [Vis alle 9 forfattere av denne artikkelen] (2015). Investigation of established genetic risk variants for glioma in prediagnostic samples from a population-based nested case-control study. Cancer Epidemiology, Biomarkers and Prevention. ISSN 1055-9965. 24(5), s. 810–816. doi: 10.1158/1055-9965.EPI-14-1106.
  • Lau, Corinna; Olstad, Ole Kristoffer; Holden, Marit; Nygård, Ståle; Fure, Hilde & Lappegård, Knut Tore [Vis alle 10 forfattere av denne artikkelen] (2015). Gene expression profiling of Gram-negative bacteria-induced inflammation in human whole blood: The role of complement and CD14-mediated innate immune response. Genomics Data. ISSN 2213-5960. 5, s. 176–183. doi: 10.1016/j.gdata.2015.05.019. Fulltekst i vitenarkiv
  • Bengtsen, Mads; Klepper, Kjetil; Gundersen, Sveinung; Cuervo Torre, Ignacio; Drabløs, Finn & Hovig, Johannes Eivind [Vis alle 9 forfattere av denne artikkelen] (2015). c-Myb Binding Sites in Haematopoietic Chromatin Landscapes. PLOS ONE. ISSN 1932-6203. 10(7). doi: 10.1371/journal.pone.0133280. Fulltekst i vitenarkiv
  • Kraus, Hanne Irene; Sandve, Geir Kjetil F.; Schmitz, Martina; Dürst, Matthias & Hovig, Johannes Eivind (2015). Transcriptionally active regions are the preferred targets for chromosomal HPV integration in cervical carcinogenesis. PLOS ONE. ISSN 1932-6203. 10(3). doi: 10.1371/journal.pone.0119566.
  • Lau, Corinna; Nygård, Ståle; Fure, Hilde; Olstad, Ole Kristoffer; Holden, Marit & Lappegård, Knut Tore [Vis alle 10 forfattere av denne artikkelen] (2015). CD14 and complement crosstalk and largely mediate the transcriptional response to Escherichia coli in human whole blood as revealed by DNA microarray. PLOS ONE. ISSN 1932-6203. 10(2). doi: 10.1371/journal.pone.0117261. Fulltekst i vitenarkiv
  • Rydbeck, Halfdan; Sandve, Geir Kjetil F.; Ferkingstad, Egil; Simovski, Boris; Rye, Morten Beck & Hovig, Johannes Eivind (2015). ClusTrack: Feature extraction and similarity measures for clustering of genome-wide data sets. PLOS ONE. ISSN 1932-6203. 10(4). doi: 10.1371/journal.pone.0123261. Fulltekst i vitenarkiv
  • Rustad, Even Holth; Dai, Hong Yan; Hov, Håkon; Coward, Eivind; Beisvag, Vidar & Myklebost, Ola [Vis alle 16 forfattere av denne artikkelen] (2015). BRAF V600E mutation in early-stage multiple myeloma: good response to broad acting drugs and no relation to prognosis. Blood Cancer Journal. ISSN 2044-5385. 5:e299(3), s. 1–7. doi: 10.1038/bcj.2015.24. Fulltekst i vitenarkiv
  • Nygaard, Vigdis; Prasmickaite, Lina; Vasiliauskaite, Kotryna; Clancy, Trevor & Hovig, Johannes Eivind (2014). Melanoma brain colonization involves the emergence of a brain-adaptive phenotype. Oncoscience. ISSN 2331-4737. 1(1), s. 82–94. doi: 10.18632/oncoscience.11.
  • Clancy, Trevor & Hovig, Johannes Eivind (2014). Differential protein network analysis of the immune cell lineage. BioMed Research International. ISSN 2314-6133. 2014. doi: 10.1155/2014/363408.
  • Clancy, Trevor & Hovig, Johannes Eivind (2014). From proteomes to complexomes in the era of systems biology. Proteomics. ISSN 1615-9853. 14(1), s. 24–41. doi: 10.1002/pmic.201300230.
  • Paulsen, Jonas; Rødland, Einar Andreas; Holden, Lars; Holden, Marit & Hovig, Johannes Eivind (2014). A statistical model of ChIA-PET data for accurate detection of chromatin 3D interactions. Nucleic Acids Research (NAR). ISSN 0305-1048. 42(18). doi: 10.1093/nar/gku738.
  • Paulsen, Jonas; Sandve, Geir Kjetil F.; Gundersen, Sveinung; Lien, Tonje Gulbrandsen; Trengereid, Kai & Hovig, Johannes Eivind (2014). HiBrowse: Multi-purpose statistical analysis of genome-wide chromatin 3D organization. Bioinformatics. ISSN 1367-4803. 30(11), s. 1620–1622. doi: 10.1093/bioinformatics/btu082. Fulltekst i vitenarkiv
  • Chilamakuri, Chandra Sekhar Reddy; Lorenz, Susanne; Madoui, Mohammed-Amin; Vodak, Daniel; Sun, Jinchang & Hovig, Johannes Eivind [Vis alle 8 forfattere av denne artikkelen] (2014). Performance comparison of four exome capture systems for deep sequencing. BMC Genomics. ISSN 1471-2164. 15(1). doi: 10.1186/1471-2164-15-449.
  • Nygård, Ståle; Reitan, Trond; Clancy, Trevor; Nygaard, Vegard; BJØRNSTAD, JOHANNES & Skrbic, Biljana [Vis alle 9 forfattere av denne artikkelen] (2014). Identifying pathogenic processes by integrating microarray data with prior knowledge. BMC Bioinformatics. ISSN 1471-2105. 15(1). doi: 10.1186/1471-2105-15-115. Fulltekst i vitenarkiv
  • Schee, Kristina; Lorenz, Susanne; Worren, Merete Molton; Günther, Clara-Cecilie; Holden, Marit & Hovig, Johannes Eivind [Vis alle 9 forfattere av denne artikkelen] (2013). Deep Sequencing the MicroRNA Transcriptome in Colorectal Cancer. PLOS ONE. ISSN 1932-6203. 8(6). doi: 10.1371/journal.pone.0066165.

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  • Kanduri, Chakravarthi; Sandve, Geir Kjetil Ferkingstad; Hovig, Eivind; De, Subhajyoti & Layer, Ryan (2021). Editorial: Genomic Colocalization and Enrichment Analyses. Frontiers in Genetics. ISSN 1664-8021. 11. doi: 10.3389/fgene.2020.617876.
  • Nakken, Sigve; Saveliev, Vladislav; Hofmann, Oliver; Møller, Pål; Myklebost, Ola & Hovig, Eivind (2021). Cancer Predisposition Sequencing Reporter (CPSR): A flexible variant report engine for high-throughput germline screening in cancer. International Journal of Cancer. ISSN 0020-7136. s. 1–6. doi: 10.1002/ijc.33749.
  • Stansberg, Christine; Hovig, Eivind; Willassen, Nils Peder & Jonassen, Inge (2021). Det er arbeidskrevende å gjøre data delbare! Khrono.no. ISSN 1894-8995.
  • Stansberg, Christine; Willassen, Nils P; Thomassen, Gard O Sundby; Hovig, Johannes Eivind & Jonassen, Inge (2020). How open databases turn out to be crucial in the fight against Covid-19. NBS-nytt. ISSN 0801-3535. 4, s. 38–43.
  • Bösl, Korbinian; Ghavidel, Fatemeh; Tekle, Kidane M; Kleppe, Rune; Hjerde, Erik & Drabløs, Finn [Vis alle 11 forfattere av denne artikkelen] (2020). End-to-End Data Management Toolkit for Norwegian Life Scientists.
  • Rye, Morten Beck; Nygård, Ståle; Drabløs, Finn; Petersen, Kjell; Våge, Dag Inge & Willassen, Nils Peder [Vis alle 8 forfattere av denne artikkelen] (2019). ELIXIR.NO - The national infrastructure of bioinformatics.
  • Bai, Baoyan; Vodák, Daniel; Nakken, Sigve; Wise, Jillian; Blaker, Yngvild Nuvin & Lingjærde, Ole Christian [Vis alle 18 forfattere av denne artikkelen] (2019). Deep profiling of genetic aberrations and clonal evolution in follicular lymphoma. Blood. ISSN 0006-4971. 134(1), s. 20–20. doi: 10.1182/blood-2019-128403.
  • Nakken, Sigve; Fournous, Ghislain; Vodak, Daniel; Aasheim, Lars Birger; Myklebost, Ola & Hovig, Eivind (2018). Personal Cancer Genome Reporter: Variant interpretation report for precision oncology. Bioinformatics. ISSN 1367-4803. 34(10), s. 1778–1780. doi: 10.1093/bioinformatics/btx817. Fulltekst i vitenarkiv
  • Drabløs, Finn; Nygård, Ståle; Petersen, Kjell; Våge, Dag Inge; Willassen, Nils Peder & Hovig, Eivind [Vis alle 7 forfattere av denne artikkelen] (2017). ELIXIR.NO - The national infrastructure for bioinformatics.
  • Kanduri, Chakravarthi; Domanska, Diana; Hovig, Eivind & Sandve, Geir Kjetil (2017). Genome build information is an essential part of genomic track files. Genome Biology. ISSN 1465-6906. 18(1). doi: 10.1186/s13059-017-1312-1.
  • Misund, Kristine; Hofste op Bruinink, Davine; Coward, Eivind; Hoogenboezem, Remco; Rustad, Even Holth & Hovig, Eivind [Vis alle 10 forfattere av denne artikkelen] (2017). Detection of mutations in Multiple Myeloma during different stages of disease.
  • Møller, Pål & Hovig, Eivind (2017). Our genes, our selves: hereditary breast cancer and biological citizenship in Norway. Medicine, Health care and Philosophy. ISSN 1386-7423. Published ahead of print, s. 1–4. doi: 10.1007/s11019-017-9803-0.
  • Aamdal, Steinar; Bentzen, Heidi Beate; Borge, Ole Johan; Erikstein, Bjørn K; Grimsgaard, Sameline & Hovig, Johannes Eivind [Vis alle 8 forfattere av denne artikkelen] (2017). Åpne Nordens grenser for forskning og behandling. Aftenposten (morgenutg. : trykt utg.). ISSN 0804-3116.
  • Simovski, Boris; Drabløs, Finn Sverre; Gundersen, Sveinung; Johansen, Morten; Domanska, Diana Ewa & Azab, Abdulrahman [Vis alle 8 forfattere av denne artikkelen] (2016). The Genomic HyperBrowser.
  • Lilleby, Wolfgang; Vlatkovic, Ljiljana; Meza, Leonardo Zepeda; Revheim, Mona Elisabeth & Hovig, Johannes Eivind (2015). Translocational renal cell carcinoma (t(6;11)(p21;q12) with transcription factor EB (TFEB) amplification and an integrated precision approach: A case report. Journal of Medical Case Reports. ISSN 1752-1947. 9:281. doi: 10.1186/s13256-015-0749-7.
  • Hovig, Eivind & Rognes, Torbjørn (2015). Bioinformatikk - å forstå teksten. I Hessen, Dag Olav; Lie, Thore & Stenseth, Nils Christian (Red.), Mendels arv - Genetikkens æra. Gyldendal Norsk Forlag A/S. ISSN 978-82-05-45818-5. s. 329–354.
  • Drabløs, Finn; Nygård, Ståle; Hovig, Johannes Eivind; Våge, Dag Inge; Willassen, Nils Peder & Petersen, Kjell [Vis alle 7 forfattere av denne artikkelen] (2014). ELIXIR - An infrastructure for bioinformatics.
  • Hovig, Johannes Eivind; Nakken, S; Clancy, T; Paulsen, J; Gundersen, S & Lien, T [Vis alle 10 forfattere av denne artikkelen] (2013). Bioinformatics in genomics. European Journal of Cancer. ISSN 0959-8049. 49, s. S45–S45.
  • Lærdahl, Jon Kristen; Nygård, Ståle; Jonassen, Inge; Hovig, Johannes Eivind; Petersen, Kjell & Drabløs, Finn [Vis alle 8 forfattere av denne artikkelen] (2013). The national technology platform for bioinformatics.
  • Nakken, Sigve; Vodák, Daniel; Fournous, Ghislain; Thomassen, Gard O Sundby & Hovig, Johannes Eivind (2013). Big challenges in personalized cancer medicine. META. ISSN 1890-1956. s. 8–12.

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Publisert 4. nov. 2010 13:58 - Sist endret 12. sep. 2017 13:04