Ernesto Jimenez-Ruiz

Image of Ernesto Jimenez-Ruiz
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Room 8165
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Visiting address Ole Johan Dahls hus Gaustadalleen 23 B 0373 OSLO
Postal address Postboks 1080 Blindern 0316 Oslo

Academic interests

My research has covered several areas, including bio-medical information processing and integration, ontology reuse, ontology versioning and evolution, ontology alignment, and text mining. I have also designed novel algorithmic techniques and developed java-based tools to serve as a proof of concept of the conducted theoretical research. My current research interest focuses on the application of Semantic Web technologies to Data Analytics.

PhD Students

Teaching (2017-2018)

Short bio

Since April 2018 I am also a Senior Research Associate at The Alan Turing Institute in London (UK) working in the Artificial Intelligence for Data Analytics (AIDA) project. I will be physically working in UK from July 2018.

In September 2016 I moved to Oslo to work as a researcher in the Centre for Scalable Data Access (SIRIUS) and the Logic and Intelligent Data (LogID) group led by Prof. Arild Waaler and Prof. Martin Giese, respectively.

In May 2015 Alessandro Solimando, a PhD student from the University of Genoa I was co-supervising together with Prof. Giovana Guerrini, defended his thesis on "Change Management in the Traditional and Semantic Web"

In January 2011, I joined the Information Systems group (University of Oxford, UK) led by Prof. Georg Gottlob and Prof. Ian Horrocks as a Research Assistant to work in the EPSRC project LogMap. Later in 2012 I worked as a researcher in the FP7 IP project Optique.

I got the doctor degree with honors in Computer Science from the University Jaume I of Castellon (Spain) under the supervision of Dr. Rafael Berlanga Llavori (University Jaume I) and Dr. Bernardo Cuenca Grau (University of Oxford). The Jaume I University awarded a Premio extraordinario de doctorado (roughly translated as a Extraordinary Doctoral Award) to my doctoral thesis (Engineering category 2010-2011). During my PhD I visited several leading institutions in the UK, including the Text Mining Group at the European Bio-informatics Institute in Cambridge; the Information Management Group at University of Manchester; and the Oxford University Computing Laboratory (now Department of Computer Science).

Tags: semantic web, semantic technologies, ontologies, ontology alignment

Publications

My complete list of publications can be found here. The PDF of most of the articles are available online.

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  • Shvaiko, Pavel; Euzenat, Jérôme; Jimenez-Ruiz, Ernesto; Hassanzadeh, Oktie & Trojahn, Cassia (2019). Proceedings of the 14th International Workshop on Ontology Matching. CEUR-WS.org. ISBN 1613-0073. 202 p.
  • Shvaiko, Pavel; Euzenat, Jérôme; Jimenez-Ruiz, Ernesto; Cheatham, Michelle & Hassanzadeh, Oktie (2018). Proceedings of the 13th International Workshop on Ontology Matching. CEUR-WS.org. ISBN 1613-0073. 227 p.
  • Dragoni, Mauro; Poveda-Villalon, Maria & Jimenez-Ruiz, Ernesto (2017). OWL: Experiences and Directions - Reasoner Evaluation. Springer. ISBN 978-3-319-54626-1. 153 p.

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  • He, Yuan; Chen, Jiaoyan; Jimenez-Ruiz, Ernesto; Dong, Hang & Horrocks, Ian (2023). Language Model Analysis for Ontology Subsumption Inference. arXiv.org. ISSN 2331-8422. doi: 10.48550/arXiv.2302.06761.
  • Horrocks, Ian; He, Yuan; Chen, Jiaoyan; Jimenez-Ruiz, Ernesto & Hadian, Ali (2022). Machine Learning-Friendly Biomedical Datasets for Equivalence and Subsumption Ontology Matching.
  • Zheng, Zhuoxun; Zhou, Baifan; Zhou, Dongzhuoran; Cheng, Gong; Jimenez-Ruiz, Ernesto & Soylu, Ahmet [Show all 7 contributors for this article] (2022). Executable Knowledge Graphs for Machine Learning: A Bosch Case of Welding Monitoring.
  • Zhou, Dongzhuoran; Zhou, Baifan; Zheng, Zhuoxun; Soylu, Ahmet; Cheng, Gong & Jimenez-Ruiz, Ernesto [Show all 8 contributors for this article] (2022). Ontology Reshaping for Knowledge Graph Construction: Applied on Bosch Welding Case.
  • d’Avila Garcez, Artur & Jimenez-Ruiz, Ernesto (2022). Preface. CEUR Workshop Proceedings. ISSN 1613-0073. 3212.
  • d’Avila Garcez, Artur & Jimenez-Ruiz, Ernesto (2021). Preface. CEUR Workshop Proceedings. ISSN 1613-0073. 2986.
  • Jimenez-Ruiz, Ernesto (2021). Ontology Alignment and the two DLs (Keynote).
  • Jimenez-Ruiz, Ernesto; Pene, Irina; Stahl, Oliver; Latif, Adnan; Paula, Rogerio Abreu de & Waaler, Arild Torolv Søetorp [Show all 7 contributors for this article] (2020). SiriusGeoAnnotator: Ontology-driven Knowledge Graph Population for Geological Image Annotation.
  • Myklebust, Erik Bryhn; Jimenez-Ruiz, Ernesto; Chen, Jiaoyan; Wolf, Raoul & Tollefsen, Knut-Erik (2020). Ontology alignment in ecotoxicological effect prediction. CEUR Workshop Proceedings. ISSN 1613-0073. 2788, p. 233–234.
  • Myklebust, Erik Bryhn; Jimenez-Ruiz, Ernesto; Chen, Jiaoyan; Wolf, Raoul & Tollefsen, Knut-Erik (2019). Knowledge Graph Embedding for Ecotoxicological Effect Prediction.
  • Myklebust, Erik Bryhn; Jimenez-Ruiz, Ernesto; Chen, Jiaoyan; Wolf, Raoul & Tollefsen, Knut-Erik (2019). Ecotoxicological Effect Prediction Using Knowledge Graph Embedding.
  • Myklebust, Erik Bryhn; Jimenez-Ruiz, Ernesto; Wolf, Raoul; Rudjord, Zofia Czyczula & Tollefsen, Knut-Erik (2019). Integrating semantic technologies in environmental risk assessment: A vision.
  • Jimenez-Ruiz, Ernesto; Hovland, Dag; Slaughter, Laura; Håndstad, Tony & Waaler, Arild (2017). On adopting ontology alignment techniques within the phenotype acquisition process. CEUR Workshop Proceedings. ISSN 1613-0073. 2042, p. 1–2.
  • Pereira, Sunny; Cross, Valerie & Jimenez-Ruiz, Ernesto (2017). On partitioning for ontology alignment. CEUR Workshop Proceedings. ISSN 1613-0073. 2032, p. 219–220.
  • Pereira, Sunny; Cross, Valerie & Jimenez-Ruiz, Ernesto (2017). On partitioning for ontology alignment. CEUR Workshop Proceedings. ISSN 1613-0073. 1963, p. 1–4.
  • Dragoni, Mauro; Poveda-Villalon, Maria & Jimenez-Ruiz, Ernesto (2017). Preface. Lecture Notes in Computer Science (LNCS). ISSN 0302-9743. 10161 LNCS, p. I–IX.
  • Soylu, Ahmet; Giese, Martin; Jimenez-Ruiz, Ernesto; Kharlamov, Evgeny; Schlatte, Rudolf & Neuenstadt, Christian [Show all 11 contributors for this article] (2016). Ontology-based Visual Querying with OptiqueVQS: Statoil and Siemens Cases. CEUR Workshop Proceedings. ISSN 1613-0073. 1818.
  • Chen, Jiaoyan; He, Yuan; Geng, Yuxia; Jimenez-Ruiz, Ernesto; Dong, Hang & Horrocks, Ian (2022). Contextual Semantic Embeddings for Ontology Subsumption Prediction. arXivLabs.
  • He, Yuan; Chen, Jiaoyan; Dong, Hang; Jimenez-Ruiz, Ernesto; Hadian, Ali & Horrocks, Ian (2022). Machine Learning-Friendly Biomedical Datasets for Equivalence and Subsumption Ontology Matching. arXivLabs.

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Published Oct. 3, 2016 1:08 PM - Last modified Sep. 11, 2019 3:39 PM