Michael Matschiner

Associate Professor - Sex and Evolution Research Group
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Visiting address Sars gate 1 0562 Oslo
Postal address Postboks 1172, Blindern 0318 Oslo

Publications

  • Baumdicker, Franz; Bisschop, Gertjan; Goldstein, Daniel; Gower, Graham; Ragsdale, Aaron P. & Tsambos, Georgia [Show all 32 contributors for this article] (2022). Efficient ancestry and mutation simulation with msprime 1.0. Genetics. ISSN 0016-6731. 220(3). doi: 10.1093/genetics/iyab229.
  • Matschiner, Michael; Barth, Julia Maria Isis; Tørresen, Ole K.; Star, Bastiaan; Baalsrud, Helle Tessand & Brieuc, Marine Servane Ono [Show all 10 contributors for this article] (2022). Supergene origin and maintenance in Atlantic cod. Nature Ecology and Evolution. ISSN 2397-334X. 6(4), p. 469–481. doi: 10.1038/s41559-022-01661-x.
  • Pinsky, Malin L.; Eikeset, Anne Maria; Helmerson, Cecilia Jenny Margareta Thomas; Bradbury, Ian R.; Bentzen, Paul & Morris, Corey [Show all 17 contributors for this article] (2021). Genomic stability through time despite decades of exploitation in cod on both sides of the Atlantic. Proceedings of the National Academy of Sciences of the United States of America. ISSN 0027-8424. 118(15). doi: 10.1073/pnas.2025453118. Full text in Research Archive
  • Vilaça, Sibelle; Piccinno, Riccardo; Rota-Stabelli, Omar; Gabrielli, Maëva; Benazzo, Andrea & Matschiner, Michael [Show all 10 contributors for this article] (2021). Divergence and hybridization in sea turtles: Inferences from genome data show evidence of ancient gene flow between species. Molecular Ecology. ISSN 0962-1083. doi: 10.1111/mec.16113. Full text in Research Archive
  • El Taher, Athimed; Ronco, Fabrizia; Matschiner, Michael; Salzburger, Walter & Böhne, Astrid (2021). Dynamics of sex chromosome evolution in a rapid radiation of cichlid fishes. Science Advances. ISSN 2375-2548. 7, p. 1–16. doi: 10.1126/sciadv.abe8215. Full text in Research Archive
  • Ronco, Fabrizia; Matschiner, Michael; Böhne, Astrid; Boila, Anna; Büscher, Heinz H & El Taher, Athimed [Show all 12 contributors for this article] (2020). Drivers and dynamics of a massive adaptive radiation in cichlid fishes. Nature. ISSN 0028-0836. 589, p. 76–81. doi: 10.1038/s41586-020-2930-4.
  • Matschiner, Michael; Böhne, Astrid; Ronco, Fabrizia & Salzburger, Walter (2020). The genomic timeline of cichlid fish diversification across continents. Nature Communications. ISSN 2041-1723. 11(1). doi: 10.1038/s41467-020-17827-9. Full text in Research Archive
  • Malinsky, M; Matschiner, Michael & Svardal, Hannes (2020). Dsuite - fast D-statistics and related admixture evidence from VCF files. Molecular Ecology Resources. ISSN 1755-098X. 21(2), p. 584–595. doi: 10.1111/1755-0998.13265.
  • Roth, Olivia; Solbakken, Monica Hongrø; Tørresen, Ole K.; Bayer, Till; Matschiner, Michael & Baalsrud, Helle Tessand [Show all 12 contributors for this article] (2020). Evolution of male pregnancy associated with remodeling of canonical vertebrate immunity in seahorses and pipefishes. Proceedings of the National Academy of Sciences of the United States of America. ISSN 0027-8424. 117(17), p. 9431–9439. doi: 10.1073/pnas.1916251117.
  • Barth, Julia Maria Isis; Gubili, Chrysoula; Matschiner, Michael; Tørresen, Ole K.; Watanabe, Shun & Egger, Bernd [Show all 11 contributors for this article] (2020). Stable species boundaries despite ten million years of hybridization in tropical eels. Nature Communications. ISSN 2041-1723. 11. doi: 10.1038/s41467-020-15099-x. Full text in Research Archive
  • Varadharajan, Srinidhi; Rastas, Pasi; Löytynoja, Ari; Matschiner, Michael; Calboli, Federico C. F. & Guo, Baocheng [Show all 9 contributors for this article] (2019). A High-Quality Assembly of the Nine-Spined Stickleback (Pungitius pungitius) Genome . Genome Biology and Evolution (GBE). ISSN 1759-6653. 11(11), p. 3291–3308. doi: 10.1093/gbe/evz240. Full text in Research Archive
  • Fang, Bohao; Merilä, Juha; Matschiner, Michael & Momigliano, Paolo (2019). Estimating uncertainty in divergence times among three-spined stickleback clades using the multispecies coalescent. Molecular Phylogenetics and Evolution. ISSN 1055-7903. 142, p. 1–5. doi: 10.1016/j.ympev.2019.106646. Full text in Research Archive
  • Matschiner, Michael (2019). Selective Sampling of Species and Fossils Influences Age Estimates Under the Fossilized Birth-Death Model. Frontiers in Genetics. ISSN 1664-8021. 10. doi: 10.3389/fgene.2019.01064. Full text in Research Archive
  • Bouckaert, Remco; Vaughan, Timothy G; Barrido-Sottani, Joëlle; Duchêne, Sebastián; Fourment, Mathieu & Gavryushkina, Alexandra [Show all 25 contributors for this article] (2019). BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis. PLoS Computational Biology. ISSN 1553-734X. 15(4). doi: 10.1371/journal.pcbi.1006650.
  • Matschiner, Michael (2019). Gondwanan vicariance or trans-Atlantic dispersal of cichlid fishes: a review of the molecular evidence. Hydrobiologia. ISSN 0018-8158. 832(1), p. 9–37. doi: 10.1007/s10750-018-3686-9.
  • Musilova, Zuzana; Cortesi, Fabio; Matschiner, Michael; Davies, Wayne I. L.; Patel, Jagdish Suresh & Stieb, Sara M. [Show all 18 contributors for this article] (2019). Vision using multiple distinct rod opsins in deep-sea fishes. Science. ISSN 0036-8075. 364(6440), p. 588–592. doi: 10.1126/science.aav4632.
  • Ceballos, Santiago; Roesti, Marius; Matschiner, Michael; Fernandez, Daniel A; Damerau, Malte & Hanel, Reinhold [Show all 7 contributors for this article] (2019). Phylogenomics of an extra-Antarctic notothenioid radiation reveals a previously unrecognized lineage and diffuse species boundaries. BMC Evolutionary Biology. ISSN 1471-2148. 19(1), p. 1–14. doi: 10.1186/s12862-019-1345-z. Full text in Research Archive
  • Malmstrøm, Martin; Britz, Ralf; Matschiner, Michael; Tørresen, Ole K.; Hadiaty, Renny Kurnia & Yaakob, Norsham [Show all 10 contributors for this article] (2018). The Most Developmentally Truncated Fishes Show Extensive Hox Gene Loss and Miniaturized Genomes. Genome Biology and Evolution (GBE). ISSN 1759-6653. 10(4), p. 1088–1103. doi: 10.1093/gbe/evy058. Full text in Research Archive
  • Langangen, Øystein; Färber, Leonie Anette; Stige, Leif Christian; Diekert, Florian Klaus; Barth, Julia Maria Isis & Matschiner, Michael [Show all 11 contributors for this article] (2018). Ticket to spawn: Combining economic and genetic data to evaluate the effect of climate and demographic structure on spawning distribution in Atlantic cod. Global Change Biology. ISSN 1354-1013. 25(1), p. 134–143. doi: 10.1111/gcb.14474. Full text in Research Archive
  • Stange, Madlen; Sanchez-Villagra, Marcelo R; Salzburger, Walter & Matschiner, Michael (2018). Bayesian divergence-time estimation with genome-wide single-nucleotide polymorphism data of sea catfishes (Ariidae) supports miocene closure of the Panamanian Isthmus. Systematic Biology. ISSN 1063-5157. 67(4), p. 681–699. doi: 10.1093/sysbio/syy006.
  • Runemark, Anna; Trier, Cassandra Nicole; Eroukhmanoff, Fabrice; Hermansen, Jo Skeie; Matschiner, Michael & Ravinet, Mark [Show all 8 contributors for this article] (2018). Variation and constraints in hybrid genome formation. Nature Ecology and Evolution. ISSN 2397-334X. 2(3), p. 549–556. doi: 10.1038/s41559-017-0437-7.
  • Toljagic, Olja; Voje, Kjetil L.; Matschiner, Michael; Liow, Lee Hsiang & Hansen, Thomas F (2018). Millions of Years Behind: Slow Adaptation of Ruminants to Grasslands. Systematic Biology. ISSN 1063-5157. 67(1), p. 145–157. doi: 10.1093/sysbio/syx059.
  • Baalsrud, Helle Tessand; Voje, Kjetil L.; Tørresen, Ole Kristian; Solbakken, Monica Hongrø; Matschiner, Michael & Malmstrøm, Martin [Show all 10 contributors for this article] (2017). Evolution of Hemoglobin Genes in Codfishes Influenced by Ocean Depth. Scientific Reports. ISSN 2045-2322. 7, p. 1–10. doi: 10.1038/s41598-017-08286-2. Full text in Research Archive
  • Barth, Julia Maria Isis; Damerau, Malte; Matschiner, Michael; Jentoft, Sissel & Hanel, Reinhold (2017). Genomic Differentiation and Demographic Histories of Atlantic and Indo-Pacific Yellowfin Tuna (Thunnus albacares) Populations. Genome Biology and Evolution (GBE). ISSN 1759-6653. 9(4), p. 1084–1098. doi: 10.1093/gbe/evx067. Full text in Research Archive
  • Malmstrøm, Martin; Matschiner, Michael; Tørresen, Ole Kristian; Jakobsen, Kjetill Sigurd & Jentoft, Sissel (2017). Whole genome sequencing data and de novo draft assemblies for 66 teleost species. Scientific Data. ISSN 2052-4463. 4, p. 1–13. doi: 10.1038/sdata.2016.132. Full text in Research Archive
  • Matschiner, Michael; Musilová, Zuzana; Barth, Julia Maria Isis; Starostová, Zuzana; Salzburger, Walter & Steel, Mike [Show all 7 contributors for this article] (2017). Bayesian phylogenetic estimation of clade ages supports trans-Atlantic dispersal of cichlid fishes. Systematic Biology. ISSN 1063-5157. 66(1), p. 3–22. doi: 10.1093/sysbio/syw076. Full text in Research Archive
  • Malmstrøm, Martin; Matschiner, Michael; Tørresen, Ole Kristian; Star, Bastiaan; Snipen, Lars-Gustav & Hansen, Thomas F [Show all 13 contributors for this article] (2016). Evolution of the immune system influences speciation rates in teleost fishes. Nature Genetics. ISSN 1061-4036. 48(10), p. 1204–1210. doi: 10.1038/ng.3645. Full text in Research Archive
  • Gante, Hugo F; Matschiner, Michael; Malmstrøm, Martin; Jakobsen, Kjetill Sigurd; Jentoft, Sissel & Salzburger, Walter (2016). Genomics of speciation and introgression in Princess cichlid fishes from Lake Tanganyika. Molecular Ecology. ISSN 0962-1083. 25(24), p. 6143–6161. doi: 10.1111/mec.13767.
  • Meyer, Britta S.; Matschiner, Michael & Salzburger, Walter (2016). Disentangling Incomplete Lineage Sorting and Introgression to Refine Species-Tree Estimates for Lake Tanganyika Cichlid Fishes. Systematic Biology. ISSN 1063-5157. 66(4), p. 531–550. doi: 10.1093/sysbio/syw069.
  • Matschiner, Michael (2016). Fitchi: Haplotype genealogy graphs based on the Fitch algorithm. Bioinformatics. ISSN 1367-4803. 32(8), p. 1250–1252. doi: 10.1093/bioinformatics/btv717.
  • Colombo, Marco; Damerau, Malte; Hanel, Reinhold; Salzburger, Walter & Matschiner, Michael (2015). Diversity and disparity through time in the adaptive radiation of Antarctic notothenioid fishes. Evolutionary Biology. ISSN 0071-3260. 28, p. 376–394. doi: 10.1111/jeb.12570.
  • Matschiner, Michael; Colombo, Marco; Damerau, Malte; Ceballos, Santiago; Hanel, Reinhold & Salzburger, Walter (2015). The Adaptive Radiation of Notothenioid Fishes in the Waters of Antarctica. In Riesch, Rüdiger; Tobler, Michael & Plath, Martin (Ed.), Extremophile Fishes. Springer. ISSN 978-3-319-13362-1. p. 35–57. doi: 10.1007/978-3-319-13362-1_3.
  • Meyer, Britta S.; Matschiner, Michael & Salzburger, Walter (2015). A tribal level phylogeny of Lake Tanganyika cichlid fishes based on a genomic multi-marker approach. Molecular Phylogenetics and Evolution. ISSN 1055-7903. 83, p. 56–71. doi: 10.1016/j.ympev.2014.10.009.

View all works in Cristin

  • Matschiner, Michael (2021). Museum specimens tell the history of rhinoceroses. Cell. ISSN 0092-8674. doi: 10.1016/j.cell.2021.08.026.
  • Matschiner, Michael (2019). Accuracy and precision of phylogenomic divergence-time estimates.
  • Matschiner, Michael & Salzburger, Walter (2019). Evolution: Genomic Signatures of Mimicry and Mimicry of Genomic Signatures. Current Biology. ISSN 0960-9822. 29, p. R363–R365. doi: 10.1016/j.cub.2019.04.015.
  • Reinar, William Brynildsen; Tørresen, Ole K.; Matschiner, Michael; Jentoft, Sissel; Nederbragt, Alexander Johan & Jakobsen, Kjetill Sigurd (2018). The impact of repetitive DNA on speciation rates in teleost fish.
  • Matschiner, Michael (2017). Phylogenetic dating of cichlid radiations.
  • Barth, Julia Maria Isis; Star, Bastiaan; Matschiner, Michael; André, Carl; Knutsen, Halvor & Bradbury, Ian [Show all 13 contributors for this article] (2017). Chromosomal rearrangements as barriers to homogenization in highly mobile fish.
  • Barth, Julia Maria Isis; Star, Bastiaan; Matschiner, Michael; André, Carl; Knutsen, Halvor & Bradbury, Ian [Show all 13 contributors for this article] (2017). Chromosomal rearrangements as barriers to homogenization in highly mobile fish.
  • Matschiner, Michael; Star, Bastiaan; Barth, Julia Maria Isis; Jakobsen, Kjetill Sigurd & Jentoft, Sissel (2017). Genomic rearrangements a phylogenetic approach.
  • Barth, Julia Maria Isis; Star, Bastiaan; Matschiner, Michael; Berg, Paul Ragnar; Jakobsen, Kjetill Sigurd & Jentoft, Sissel (2016). Ancient genomic variation separates Atlantic cod ecotypes; implications for management.
  • Matschiner, Michael (2015). Inversions or Introgression: The origin of high-divergence genomic regions in Atlantic cod.
  • Star, Bastiaan; Jentoft, Sissel; Matschiner, Michael; Nederbragt, Alexander Johan; Kjesbu, Olav Sigurd & Berg, Paul Ragnar [Show all 12 contributors for this article] (2015). Does historic DNA provide genomic evidence for recent selection in Atlantic cod?
  • Matschiner, Michael; Star, Bastiaan; Berg, Paul Ragnar; Tørresen, Ole Kristian; Nederbragt, Alexander Johan & Hansen, Marianne Helén Selander [Show all 11 contributors for this article] (2014). Population differentiation and local adaptation in Atlantic cod.

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Published Oct. 7, 2020 6:03 PM - Last modified Oct. 7, 2020 6:03 PM

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