Academic Interests
My main research interests fall within the areas of fungal molecular ecology and evolution. My research focuses include:
- Fungal community ecology
- Fungal phenology and global change
- Fungal population genetics/genomics
- Evolutionary genomics of fungi
- Forest ecology and management
- Development of DNA metabarcoding methods
- Long-read sequencing of fungal diversity
Publications
162. Asplund, J., Birkemoe, T., Kauserud, H., Maurice, S., Ronold, E. K., & Nordén, J. (2026). Functional diversity of dead wood promotes species-rich communities of fungi. Fungal Ecology, 79. https://doi.org/10.1016/j.funeco.2025.101473
161. Asplund, K. U. J., Karlsen, D. P., Brysting, A. K., Halvorsen, R., Kauserud, H., Kjønaas, O. J., & Asplund, J. (2026). Long-term effects of clear-cutting on understory plant communities in boreal forests. Forest Ecology and Management, 613. https://doi.org/10.1016/j.foreco.2026.123784
160. Fjelde, M. O., Kauserud, H., Halvorsen, R., Nilsen, C., Konestabo, H. S., Skrede, I., & Maurice, S. (2026). Ecosystem Sequencing of the Boreal Forest Mycobiome Reveals High Substrate Specificity. Molecular Ecology, 35(11). https://doi.org/10.1111/mec.70423
159. Human, Z. R., Stursová, M., Odriozola, I., Vetrovsky, T., Howe, A., Navrátilová, D., López-Mondéjar, R., Zifcáková, L., Brabcová, V., Mundra, S., Thoen, E., Morgado, L., Fiore-Donno, A. M., Bonkowski, M., Adamczyk, B., Kohout, P., Lipton, M. S., Calhoun, S., LaButti, K., Lipzen, A., Keymanesh, K., Tejomurthula, S., Pennacchio, C., Grigoriev, V. I., Kauserud, H., & Baldrian, P. (2026). Seasonality of composition, genomic potential and activity of coniferous forest soil microbiomes. Scientific Data, 13, 944. https://doi.org/10.1038/s41597-026-07163-w
158. Ronold, E. K., Morgado, L., Mundra, S., Nybakken, L., Halvorsen, R., & Kauserud, H. (2026). Above- and belowground communities in boreal forests are tightly linked along common ecological gradients. Plant and Soil, 521, 1231–1251. https://doi.org/10.1007/s11104-026-08440-8
157. Thoen, E., Krabberød, A. K., Nogerius, V. T., Skrede, I., Rosling, A., & Kauserud, H. (2026). Short- and long-read metabarcoding of Archaeorhizomycetes reveals high phylogenetic diversity structured by vegetation and climate. New Phytologist, 249, 418–432. https://doi.org/10.1111/nph.70682
156. Kauserud, H., Martin-Sanchez, P. M., Estensmo, E. L., Botnen, S., Morgado, L., Maurice, S., Høiland, K., & Skrede, I. (2025). Yeasts Prefer Daycares and Molds Prefer Private Homes. Microbial Ecology, 88, 7. https://doi.org/10.1007/s00248-025-02505-4
155. Krabberød, A. K., Stokke, E., Thoen, E., Skrede, I., & Kauserud, H. (2025). The Ribosomal Operon Database: A Full-Length rDNA Operon Database Derived From Genome Assemblies. Molecular Ecology Resources, 25. https://doi.org/10.1111/1755-0998.14031
154. Lo Madsen, R., Nybakken, L., Kjønaas, O. J., Kauserud, H., & Asplund, J. (2025). Decomposition of plant, fungal and tea litter in Picea abies forests with and without a history of clear-cutting. Applied Soil Ecology, 215. https://doi.org/10.1016/j.apsoil.2025.106485
153. Lu, D. S., Methlie, I. S. H., Sønstebø, J. H., Andersen, A., Peris, D., Maurice, S., Kauserud, H. & Skrede, I. (2025). Postglacial History of a Widespread Wood-Decaying Fungus in Europe Suggests Migration out of Multiple Refugia Followed by Admixture. Molecular Ecology, 34(22). https://doi.org/10.1111/mec.70053
152. Lunde, L. F., Birkemoe, T., Sverdrup-Thygeson, A., Asplund, J., Halvorsen, R., Kjønaas, O. J., Nordén, J., Maurice, S., Skrede, I., Nybakken, L. & Kauserud, H. (2025). Towards repeated clear-cutting of boreal forests - a tipping point for biodiversity? Biological Reviews, 100(3). 1181-1205, https://doi.org/10.1111/brv.13180
151. Salamanca-Fonseca, M., Sanchez, A., Corrales, A., Kauserud, H., Thoen, E., Krabberød, A. K. & Skrede, I. (2025). Beyond seasonal and host factors: ecosystem dynamics drive palm-associated root fungal communities at a local scale. Plant and Soil, 514, 1027–1041. https://doi.org/10.1007/s11104-025-07438-y
150. Asplund, J., Nordén, J., Kjønaas, O. J., Madsen, R. L., Lunde, L. F., Birkemoe, T., Ronold, E. K., Norkute, M., Jansson, K. U., Karlsen, D. P., Sverdrup-Thygeson, A., Skrede, I., Methlie, I. S. H., Maurice, S., Botten, U. G., Krok, R. J., Kauserud, H. & Nybakken, L. (2024). Long term effects of forest management on forest structure and dead wood in mature boreal forests. Forest Ecology and Management, 572, 122315. https://doi.org/10.1016/j.foreco.2024.122315
149. Harder, C. B., Miyauchi, S., Virágh, M., Kuo, A. L., Thoen, E., Andreopoulos, B., Lu, D. B., Skrede, I., Drula, E., Henrissat, B., Morin, E., Kohler, A., Barry, K., Labutti, K., Salamov, A., Lipzen, A., Merenyi, Z., Hegedüs, B., Baldrian, P., Stursova, M., Weitz, H., Taylor, A., Koriabine, M., Savage, E., Grigoriev, I. V., Nagy, L. G., Martin, F. & Kauserud, H. (2024). Extreme overall mushroom genome expansion in Mycena s.s. irrespective of plant hosts or substrate specializations. Cell Genomics, 4(7). https://doi.org/10.1016/j.xgen.2024.100586
148. Kauserud, H., Justad, T. A., Vindenes, Y., Methlie, I. S., Sønstebø, J. H., Skrede, I. & Maurice, S. (2024). Limited evidence of local adaptation of growth and decomposition rates in the widespread wood-decay fungus Fomitopsis pinicola. Fungal Ecology, 70. https://doi.org/10.1016/j.funeco.2024.101353
147. Lu, D. S., Peris, D., Sønstebø, J. H., James, T. Y., Rieseberg, L. H., Maurice, S., Kauserud, H., Ravinet, M. & Skrede, I. (2024). Reticulate evolution and rapid development of reproductive barriers upon secondary contact in a forest fungus. Current Biology, 34(19). https://doi.org/10.1016/j.cub.2024.08.046
146. Michaud, T. J., Pearse, I. S., Kauserud, H., Andrew, C. J. & Kennedy, P. G. (2024). Mast seeding in European beech (Fagus sylvatica L.) is associated with reduced fungal sporocarp production and community diversity. Ecology Letters, 27(6). https://doi.org/10.1111/ele.14460
145. Mundra, S., Loganathachetti, D. S., Kauserud, H., Fiore-Donno, A. M., Økland, T., Nordbakken, J. F., & Kjønaas, O. J. (2024). Tree species replacement from birch to spruce affects eukaryome in boreal forest soil. European Journal of Soil Biology, 120, 103593. https://doi.org/10.1016/j.ejsobi.2023.103593
144. Ransedokken, Y., Asplund, J., Morgado, L. N., Kauserud, H., Mundra, S., Ohlson, M., Halvorsen, R., & Nybakken, L. (2024). Synchronic shifts in phenolic compounds and fungal communities during litter decomposition in boreal forests. Forest Ecology and Management, 554, 121696. https://doi.org/10.1016/j.foreco.2024.121696
143. Simpson, H. J., Andrew, C., Skrede, I., Kauserud, H., & Schilling, J. S. (2024). Global field collection data confirm an affinity of brown rot fungi for coniferous habitats and substrates. New Phytologist, 242(6), 2775–2786. https://doi.org/10.1111/nph.19723
142. Aguilar-Trigueros, C. A., Krah, F. S., Cornwell, W. K., Zanne, A. E., Abrego, N., Anderson, I. C., Andrew, C. J., Baldrian, P., Bässler, C., Bissett, A., Chaudhary, V. B., Chen, B. D., Chen, Y. L., Delgado-Baquerizo, M., Deveautour, C., Egidi, E., Flores-Moreno, H., Golan, J., Heilmann-Clausen, J., Hempel, S., Hu, Y., Kauserud, H., Kivlin, S. N., Kohout, P., Lammel, D. R., Maestre, F. T., Pringle, A., Purhonen, J., Singh, B. K., Veresoglou, S. D., Větrovsky, T., Zhang, H., Rillig, M. C., & Powell, J. R. (2023). Symbiotic status alters fungal eco-evolutionary offspring trajectories. Ecology Letters, 26(9), 1523–1534. https://doi.org/10.1111/ele.14271
141. Harder, C. B., Hesling, E., Botnen, S. S., Lorberau, K. E., Dima, B., von Bonsdorff-Salminen, T., Niskanen, T., Jarvis, S. G., Ouimette, A., Hester, A., Hobbie, E. A., Taylor, A. F. S., & Kauserud, H. (2023). Mycena species can be opportunist-generalist plant root invaders. Environmental Microbiology, 25(10), 1875–1893. https://doi.org/10.1111/1462-2920.16398
140. Kauserud, H. (2023). ITS alchemy: On the use of ITS as a DNA marker in fungal ecology. Fungal Ecology, 65, 101274. https://doi.org/10.1016/j.funeco.2023.101274
139. Lunde, L. F., Boddy, L., Sverdrup-Thygeson, A., Jacobsen, R. M., Kauserud, H., & Birkemoe, T. (2023). Beetles provide directed dispersal of viable spores of a keystone wood decay fungus. Fungal Ecology, 63, 101232. https://doi.org/10.1016/j.funeco.2023.101232
138. Rustøen, F., Høiland, K., Heegaard, E., Boddy, L., Gange, A. C., Kauserud, H., & Andrew, C. (2023). Substrate affinities of wood decay fungi are foremost structured by wood properties not climate. Fungal Ecology, 63, 101231. https://doi.org/10.1016/j.funeco.2023.101231
137. Birkemoe, T., Nybakken, L., Andelic, M., Tangnæs, M. J., Sverdrup-Thygeson, A., Kauserud, H., & Jacobsen, R. M. (2022). Secondary metabolites and nutrients explain fungal community composition in aspen wood. Fungal Ecology, 59, 101115. https://doi.org/10.1016/j.funeco.2021.101115
136. Bässler, C., Heilmann-Clausen, J., Andrew, C., Boddy, L., Büntgen, U., Diez, J., Heegaard, E., Egli, S., Gange, A. C., Halvorsen, R., Kauserud, H., Kirk, P. M., Krisai-Greilhuber, I., Kuyper, T. W., Nordén, J., Senn-Irlet, B., & Krah, F. S. (2022). European mushroom assemblages are phylogenetically structured by temperature. Ecography, 11. https://doi.org/10.1111/ecog.06206
135. Estensmo, E. L. F., Botnen, S. S., Maurice, S., Martin-Sanchez, P. M., Morgado, L., Engh, I. B., Høiland, K., Skrede, I., & Kauserud, H. (2022). The Indoor Mycobiomes of Daycare Centers Are Affected by Occupancy and Climate. Applied and Environmental Microbiology, 88(6). https://doi.org/10.1128/aem.02113-21
134. Fiore-Donno, A. M., Human, Z. R., Stursová, M., Mundra, S., Morgado, L., Kauserud, H., Baldrian, P., & Bonkowski, M. (2022). Soil compartments (bulk soil, litter, root and rhizosphere) as main drivers of soil protistan communities distribution in forests with different nitrogen deposition. Soil Biology & Biochemistry, 168. https://doi.org/10.1016/j.soilbio.2022.108628
133. Jenssen, A. L., Kauserud, H., & Maurice, S. (2022). High phenotypic variability in the wood decay fungus Phellopilus nigrolimitatus. Fungal Ecology, 59, 100982. https://doi.org/10.1016/j.funeco.2020.100982
132. Lunde, L. F., Birkemoe, T., Kauserud, H., Boddy, L., Jacobsen, R. M., Morgado, L., Sverdrup-Thygeson, A., & Maurice, S. (2022). DNA metabarcoding reveals host-specific communities of arthropods residing in fungal fruit bodies. Proc. R. Soc. B, 289(1968). https://doi.org/10.1098/rspb.2021.2622
131. Lunde, L. F., Jacobsen, R., Kauserud, H., Boddy, L., Nybakken, L., Sverdrup-Thygeson, A., & Birkemoe, T. (2022). Legacies of invertebrate exclusion and tree secondary metabolites control fungal communities in dead wood. Molecular Ecology, 31(11), 3241-3253. https://doi.org/10.1111/mec.16448
130. Maillard, F., Fernandez, C. W., Mundra, S., Heckman, K. A., Kolka, R. K., Kauserud, H., & Kennedy, P. G. (2022). Warming drives a 'hummockification' of microbial communities associated with decomposing mycorrhizal fungal necromass in peatlands. New Phytologist, 234(6), 2032–2043. https://doi.org/10.1111/nph.17755
129. Martin-Sanchez, P. M., Nunez, M., Estensmo, E. L. F., Skrede, I., & Kauserud, H. (2022). Comparison of Methods to Identify and Monitor Mold Damages in Buildings. Applied Sciences, 12(18), 9372. https://doi.org/10.3390/app12189372
128. Mundra, S., Kauserud, H., Økland, T., Nordbakken, J. F., Ransedokken, Y., & Kjønaas, O. J. (2022). Shift in tree species changes the belowground biota of boreal forests. New Phytologist, 234(6), 2073–2087. https://doi.org/10.1111/nph.18109
127. Peris, D., Lu, D. S., Kinneberg, V. B., Methlie, I. S., Dahl, M. S., James, T. Y., Kauserud, H., & Skrede, I. (2022). Large-scale fungal strain sequencing unravels the molecular diversity in mating loci maintained by long-term balancing selection. Plos Genetics, 18(3). https://doi.org/10.1371/journal.pgen.1010097
126. Seeber, P. A., von Hippel, B., Kauserud, H., Löber, U., Stoof-Leichsenring, K. R., Herzschuh, U., & Epp, L. S. (2022). Evaluation of lake sedimentary ancient DNA metabarcoding to assess fungal biodiversity in Arctic paleoecosystems. Environmental DNA, 4(5), 1150–1163. https://doi.org/10.1002/edn3.315
125. Sønstebø, J. H., Trucchi, E., Nordén, J., Skrede, I., Miettinen, O., Haridas, S., Pangilinan, J., Grigoriev, I., Martin, F., Kauserud, H., & Maurice, S. (2022). Population genomics of a forest fungus reveals high gene flow and climate adaptation signatures. Molecular Ecology, 31(7), 1963–1979. https://doi.org/10.1111/mec.16369
124. Danielsen, J. S., Morgado, L., Mundra, S., Nybakken, L., Davey, M., & Kauserud, H. (2021). Establishment of spruce plantations in native birch forests reduces soil fungal diversity. Fems Microbiology Ecology, 97(7). https://doi.org/10.1093/femsec/fiab074
123. Estensmo, E. L. F., Maurice, S., Morgado, L., Martin-Sanchez, P. M., Skrede, I., & Kauserud, H. (2021). The influence of intraspecific sequence variation during DNA metabarcoding: A case study of eleven fungal species. Molecular Ecology Resources, 21(4), 1141–1148. https://doi.org/10.1111/1755-0998.13329
122. Estensmo, E. L. F., Morgado, L., Maurice, S., Martin-Sanchez, P. M., Engh, I. B., Mattsson, J., Kauserud, H., & Skrede, I. (2021). Spatiotemporal variation of the indoor mycobiome in daycare centers. Microbiome, 9, 220.
121. Martin-Sanchez, P. M., Estensmo, E. L. F., Morgado, L. N., Maurice, S., Engh, I. B., Skrede, I., & Kauserud, H. (2021). Analysing indoor mycobiomes through a large-scale citizen science study in Norway. Molecular Ecology, 30(11), 2689–2705. https://doi.org/10.1111/mec.15916
120. Maurice, S., Arnault, G., Nordén, J., Botnen, S. S., Miettinen, O., & Kauserud, H. (2021). Fungal sporocarps house diverse and host-specific communities of fungicolous fungi. Isme Journal, 15(5), 1445–1457. https://doi.org/10.1038/s41396-020-00862-1
119. Mundra, S., Kjønaas, O. J., Morgado, L. N., Krabberød, A. K., Ransedokken, Y., & Kauserud, H. (2021). Soil depth matters: shift in composition and inter-kingdom co-occurrence patterns of microorganisms in forest soils. Fems Microbiology Ecology, 97(3). https://doi.org/10.1093/femsec/fiab022
118. Põlme, S., Abarenkov, K., Nilsson, R. H., Lindahl, B. D., Clemmensen, K. E., Kauserud, H., Nguyen, N., Kjoller, R., Bates, S. T., Baldrian, P., Froslev, T. G., Adojaan, K., Vizzini, A., Suija, A., Pfister, D., Baral, H. O., Järv, H., Madrid, H., Nordén, J., Liu, J. K., Pawlowska, J., Põldmaa, K., Pärtel, K., Runnel, K., Hansen, K., Larsson, K. H., Hyde, K. D., Sandoval-Denis, M., Smith, M. E., Toome-Heller, M., Wijayawardene, N. N., Menolli, N., Jr., Reynolds, N. K., Drenkhan, R., Maharachchikumbura, S. S. N., Gibertoni, T. B., Læssøe, T., Davis, W., Tokarev, Y., Corrales, A., Soares, A. M., Agan, A., Machado, A. R., Argüelles-Moyao, A., Detheridge, A., de Meiras-Ottoni, A., Verbeken, A., Dutta, A. K., Cui, B. K., Pradeep, C. K., Marín, C., Stanton, D., Gohar, D., Wanasinghe, D. N., Otsing, E., Aslani, F., Griffith, G. W., Lumbsch, T. H., Grossart, H. P., Masigol, H., Timling, I., Hiiesalu, I., Oja, J., Kupagme, J. Y., Geml, J., Alvarez-Manjarrez, J., Ilves, K., Loit, K., Adamson, K., Nara, K., Küngas, K., Rojas-Jimenez, K., Bitenieks, K., Irinyi, L., Nagy, L. G., Soonvald, L., Zhou, L. W., Wagner, L., Aime, M. C., Öpik, M., Mujica, M. I., Metsoja, M., Ryberg, M., Vasar, M., Murata, M., Nelsen, M. P., Cleary, M., Samarakoon, M. C., Doilom, M., Bahram, M., Hagh-Doust, N., Dulya, O., Johnston, P., Kohout, P., Chen, Q., Tian, Q., Nandi, R., Amiri, R., Perera, R. H., dos Santos Chikowski, R., Mendes-Alvarenga, R. L., Garibay-Orijel, R., Gielen, R., Phookamsak, R., Jayawardena, R. S., Rahimlou, S., Karunarathna, S. C., Tibpromma, S., Brown, S. P., Sepp, S. K., Mundra, S., Luo, Z. H., Bose, T., Vahter, T., Netherway, T., Yang, T., May, T., Varga, T., Li, W., Coimbra, V. R. M., de Oliveira, V. R. T., de Lima, V. X., Mikryukov, V. S., Lu, Y., Matsuda, Y., Miyamoto, Y., Kõljalg, U., & Tedersoo, L. (2021). Correction to: FungalTraits: a user friendly traits database of fungi and fungus-like stramenopiles. Fungal Diversity, 107, 129–132. https://doi.org/10.1007/s13225-021-00470-0
117. Seierstad, K. S., Fossdal, R., Miettinen, O., Carlsen, T., Skrede, I., & Kauserud, H. (2021). Contrasting genetic structuring in the closely related basidiomycetes Trichaptum abietinum and Trichaptum fuscoviolaceum (Hymenochaetales). Fungal Biology, 125(4), 269-275. https://doi.org/10.1016/j.funbio.2020.11.001
116. Skrede, I., Murat, C., Hess, J., Maurice, S., Sønstebø, J. H., Kohler, A., Barry-Etienne, D., Eastwood, D., Högberg, N., Martin, F., & Kauserud, H. (2021). Contrasting demographic histories revealed in two invasive populations of the dry rot fungus Serpula lacrymans. Molecular Ecology, 30(12), 2772–2789. https://doi.org/10.1111/mec.15934
115. Straumfors, A., Mundra, S., Foss, O. A. H., Mollerup, S. K., & Kauserud, H. (2021). The airborne mycobiome and associations with mycotoxins and inflammatory markers in the Norwegian grain industry. Scientific Reports, 11, 9357. https://doi.org/10.1038/s41598-021-88252-1
114. Tonjer, L. R., Thoen, E., Morgado, L., Botnen, S., Mundra, S., Nybakken, L., Bryn, A., & Kauserud, H. (2021). Fungal community dynamics across a forest-alpine ecotone. Molecular Ecology, 30(19), 4926–4938. https://doi.org/10.1111/mec.16095
113. Botnen, S. S., Mundra, S., Kauserud, H., & Eidesen, P. B. (2020). Glacier retreat in the High Arctic: opportunity or threat for ectomycorrhizal diversity? Fems Microbiology Ecology, 96(12). https://doi.org/10.1093/femsec/fiaa171
112. Botnen, S. S., Thoen, E., Eidesen, P. B., Krabberød, A. K., & Kauserud, H. (2020). Community composition of arctic root-associated fungi mirrors host plant phylogeny. FEMS Microbiology Ecology, 96(11). https://doi.org/10.1093/femsec/fiaa185
111. Diez, J., Kauserud, H., Andrew, C., Heegaard, E., Krisai-Greilhuber, I., Senn-Irlet, B., Høiland, K., Egli, S., & Büntgen, U. (2020). Altitudinal upwards shifts in fungal fruiting in the Alps. Proc. R. Soc. B, 287(1919). https://doi.org/10.1098/rspb.2019.2348
110. Põlme, S., Abarenkov, K., Nilsson, R. H., Lindahl, B. D., Clemmensen, K. E., Kauserud, H., Nguyen, N., Kjoller, R., Bates, S. T., Baldrian, P., Froslev, T. G., Adojaan, K., Vizzini, A., Suija, A., Pfister, D., Baral, H. O., Järv, H., Madrid, H., Nordén, J., Liu, J. K., Pawlowska, J., Põldmaa, K., Pärtel, K., Runnel, K., Hansen, K., Larsson, K. H., Hyde, K. D., Sandoval-Denis, M., Smith, M. E., Toome-Heller, M., Wijayawardene, N. N., Menolli, N., Jr., Reynolds, N. K., Drenkhan, R., Maharachchikumbura, S. S. N., Gibertoni, T. B., Læssøe, T., Davis, W., Tokarev, Y., Corrales, A., Soares, A. M., Agan, A., Machado, A. R., Argüelles-Moyao, A., Detheridge, A., de Meiras-Ottoni, A., Verbeken, A., Dutta, A. K., Cui, B. K., Pradeep, C. K., Marín, C., Stanton, D., Gohar, D., Wanasinghe, D. N., Otsing, E., Aslani, F., Griffith, G. W., Lumbsch, T. H., Grossart, H. P., Masigol, H., Timling, I., Hiiesalu, I., Oja, J., Kupagme, J. Y., Geml, J., Alvarez-Manjarrez, J., Ilves, K., Loit, K., Adamson, K., Nara, K., Küngas, K., Rojas-Jimenez, K., Bitenieks, K., Irinyi, L., Nagy, L. G., Soonvald, L., Zhou, L. W., Wagner, L., Aime, M. C., Öpik, M., Mujica, M. I., Metsoja, M., Ryberg, M., Vasar, M., Murata, M., Nelsen, M. P., Cleary, M., Samarakoon, M. C., Doilom, M., Bahram, M., Hagh-Doust, N., Dulya, O., Johnston, P., Kohout, P., Chen, Q., Tian, Q., Nandi, R., Amiri, R., Perera, R. H., dos Santos Chikowski, R., Mendes-Alvarenga, R. L., Garibay-Orijel, R., Gielen, R., Phookamsak, R., Jayawardena, R. S., Rahimlou, S., Karunarathna, S. C., Tibpromma, S., Brown, S. P., Sepp, S. K., Mundra, S., Luo, Z. H., Bose, T., Vahter, T., Netherway, T., Yang, T., May, T., Varga, T., Li, W., Coimbra, V. R. M., de Oliveira, V. R. T., de Lima, V. X., Mikryukov, V. S., Lu, Y., Matsuda, Y., Miyamoto, Y., Kõljalg, U., & Tedersoo, L. (2020). FungalTraits: a user-friendly traits database of fungi and fungus-like stramenopiles. Fungal Diversity, 105, 1–16. https://doi.org/10.1007/s13225-020-00466-2
109. Thoen, E., Harder, C. B., Kauserud, H., Botnen, S. S., Vik, U., Taylor, A. F. S., Menkis, A., & Skrede, I. (2020). In vitro evidence of root colonization suggests ecological versatility in the genus Mycena. New Phytologist, 227(2), 601–612. https://doi.org/10.1111/nph.16545
108. Aas, A. B., Andrew, C. J., Blaalid, R., Vik, U., Kauserud, H., & Davey, M. L. (2019). Fine-scale diversity patterns in belowground microbial communities are consistent across kingdoms. FEMS Microbiology Ecology, 95(6). https://doi.org/10.1093/femsec/fiz058
107. Andrew, C., Büntgen, U., Egli, S., Senn-Irlet, B., Grytnes, J. A., Heilmann-Clausen, J., Boddy, L., Bässler, C., Gange, A. C., Heegaard, E., Høiland, K., Kirk, P. M., Krisai-Greilhüber, I., Kuyper, T. W., & Kauserud, H. (2019). Open-source data reveal how collections-based fungal diversity is sensitive to global change. Applications in Plant Sciences, 7(3). https://doi.org/10.1002/aps3.1227
106. Andrew, C., Diez, J., James, T. Y., & Kauserud, H. (2019). Fungarium specimens: a largely untapped source in global change biology and beyond. Phil. Trans. R. Soc. B, 374(1763). https://doi.org/10.1098/rstb.2017.0392
105. Asplund, J., Kauserud, H., Ohlson, M., & Nybakken, L. (2019). Spruce and beech as local determinants of forest fungal community structure in litter, humus and mineral soil. FEMS Microbiology Ecology, 95(2). https://doi.org/10.1093/femsec/fiy232
104. Botnen, S. S., Davey, M. L., Aas, A. B., Carlsen, T., Thoen, E., Heegaard, E., Vik, U., Dresch, P., Mundra, S., Peintner, U., Taylor, A. F. S., & Kauserud, H. (2019). Biogeography of plant root-associated fungal communities in the North Atlantic region mirrors climatic variability. Journal of Biogeography, 46(7), 1532–1546. https://doi.org/10.1111/jbi.13613
103. Krah, F. S., Büntgen, U., Schaefer, H., Müller, J., Andrew, C., Boddy, L., Diez, J., Egli, S., Freckleton, R., Gange, A. C., Halvorsen, R., Heegaard, E., Heideroth, A., Heibl, C., Heilmann-Clausen, J., Høiland, K., Kar, R., Kauserud, H., Kirk, P. M., Kuyper, T. W., Krisai-Greilhuber, I., Nordén, J., Papastefanou, P., Senn-Irlet, B., & Bässler, C. (2019). European mushroom assemblages are darker in cold climates. Nature Communications, 10, 2890. https://doi.org/10.1038/s41467-019-10767-z
102. Straumfors, A., Foss, O. A. H., Fuss, J., Mollerup, S. K., Kauserud, H., & Mundra, S. (2019). The Inhalable Mycobiome of Sawmill Workers: Exposure Characterization and Diversity. Applied and Environmental Microbiology, 85, 21. https://doi.org/10.1128/AEM.01448-19
101. Thoen, E., Aas, A. B., Vik, U., Brysting, A. K., Skrede, I., Carlsen, T., & Kauserud, H. (2019). A single ectomycorrhizal plant root system includes a diverse and spatially structured fungal community. Mycorrhiza, 29, 167–180. https://doi.org/10.1007/s00572-019-00889-z
100. Zinger, L., Bonin, A., Alsos, I. G., Balint, M., Bik, H., Boyer, F., Chariton, A. A., Creer, S., Coissac, E., Deagle, B. E., Barba, M., Dickie, I. A., Dumbrell, A. J., Ficetola, G. F., Fierer, N., Fumagalli, L., Gilbert, M. T. P., Jarman, S., Jumpponen, A., Kauserud, H., Orlando, L., Pansu, J., Pawlowski, J., Tedersoo, L., Thomsen, P. F., Willerslev, E., & Taberlet, P. (2019). DNA metabarcoding-Need for robust experimental designs to draw sound ecological conclusions. Molecular Ecology, 28(8), 1857–1862. https://doi.org/10.1111/mec.15060
99. Andrew, C., Halvorsen, R., Heegaard, E., Kuyper, T. W., Heilmann-Clausen, J., Krisai-Greilhuber, I., Bässler, C., Egli, S., Gange, A. C., Høiland, K., Kirk, P. M., Senn-Irlet, B., Boddy, L., Büntgen, U., & Kauserud, H. (2018). Continental-scale macrofungal assemblage patterns correlate with climate, soil carbon and nitrogen deposition. Journal of Biogeography, 45(8), 1942–1953. https://doi.org/10.1111/jbi.13374
98. Andrew, C., Heegaard, E., Gange, A. C., Senn-Irlet, B., Egli, S., Kirk, P. M., Büntgen, U., Kauserud, H., & Boddy, L. (2018). Congruency in fungal phenology patterns across dataset sources and scales. Fungal Ecology, 32, 9–17. https://doi.org/10.1016/j.funeco.2017.11.009
97. Andrew, C., Heegaard, E., Høiland, K., Senn-Irlet, B., Kuyper, T. W., Krisai-Greilhuber, I., Kirk, P. M., Heilmann-Clausen, J., Gange, A. C., Egli, S., Bässler, C., Büntgen, U., Boddy, L., & Kauserud, H. (2018). Explaining European fungal fruiting phenology with climate variability. Ecology, 99(6), 1306–1315. https://doi.org/10.1002/ecy.2237
96. Asplund, J., Kauserud, H., Bokhorst, S., Lie, M. H., Ohlson, M., & Nybakken, L. (2018). Fungal communities influence decomposition rates of plant litter from two dominant tree species. Fungal Ecology, 32, 1–8. https://doi.org/10.1016/j.funeco.2017.11.003
95. Balasundaram, S. V., Hess, J., Durling, M. B., Moody, S. C., Thorbek, L., Progida, C., LaButti, K., Aerts, A., Barry, K., Grigoriev, I. V., Boddy, L., Högberg, N., Kauserud, H., Eastwood, D. C., & Skrede, I. (2018). The fungus that came in from the cold: dry rot's pre-adapted ability to invade buildings. The ISME Journal, 12(3), 791–801. https://doi.org/10.1038/s41396-017-0006-8
94. Botnen, S. S., Davey, M. L., Halvorsen, R., & Kauserud, H. (2018). Sequence clustering threshold has little effect on the recovery of microbial community structure. Molecular Ecology Resources, 18(5), 1064–1076. https://doi.org/10.1111/1755-0998.12894
93. Gange, A. C., Heegaard, E., Boddy, L., Andrew, C., Kirk, P., Halvorsen, R., Kuyper, T. W., Bässler, C., Diez, J., Heilman-Clausen, J., Høiland, K., Büntgen, U., & Kauserud, H. (2018). Trait-dependent distributional shifts in fruiting of common British fungi. Ecography, 41(1), 51–61. https://doi.org/10.1111/ecog.03233
92. Jacobsen, R. M., Sverdrup-Thygeson, A., Kauserud, H., & Birkemoe, T. (2018). Revealing hidden insect - fungus interactions; moderately specialized, modular and anti-nested detritivore networks. Proc. R. Soc. B, 285(1876). https://doi.org/10.1098/rspb.2017.2833
91. Jacobsen, R. M., Sverdrup-Thygeson, A., Kauserud, H., Mundra, S., & Birkemoe, T. (2018). Exclusion of invertebrates influences saprotrophic fungal community and wood decay rate in an experimental field study. Functional Ecology, 32(11), 2571–2582. https://doi.org/10.1111/1365-2435.13196
90. Khomich, M., Cox, F., Andrew, C. J., Andersen, T., Kauserud, H., & Davey, M. L. (2018). Coming up short: Identifying substrate and geographic biases in fungal sequence databases. Fungal Ecology, 36, 75–80. https://doi.org/10.1016/j.funeco.2018.08.002
89. Aas, A. B., Davey, M. L., & Kauserud, H. (2017). ITS all right mama: investigating the formation of chimeric sequences in the ITS2 region by DNA metabarcoding analyses of fungal mock communities of different complexities. Molecular Ecology Resources, 17(4), 730–741. https://doi.org/10.1111/1755-0998.12622
88. Andrew, C., Heegaard, E., Kirk, P. M., Bässler, C., Heilmann-Clausen, J., Krisai-Greilhuber, I., Kuyper, T. W., Senn-Irlet, B., Büntgen, U., Diez, J., Egli, S., Gange, A. C., Halvorsen, R., Høiland, K., Nordén, J., Rustøen, F., Boddy, L., & Kauserud, H. (2017). Big data integration: Pan-European fungal species observations' assembly for addressing contemporary questions in ecology and global change biology. Fungal Biology Reviews, 31(2), 88–98. https://doi.org/10.1016/j.fbr.2017.01.001
87. Cross, H., Sønstebø, J. H., Nagy, N. E., Timmermann, V., Solheim, H., Børja, I., Kauserud, H., Carlsen, T., Rzepka, B., Wasak, K., Vivian-Smith, A., & Hietala, A. M. (2017). Fungal diversity and seasonal succession in ash leaves infected by the invasive ascomycete Hymenoscyphus fraxineus. New Phytologist, 213(3), 1405–1417. https://doi.org/10.1111/nph.14204
86. Davey, M. L., Skogen, M. J., Heegaard, E., Halvorsen, R., Kauserud, H., & Ohlson, M. (2017). Host and tissue variations overshadow the response of boreal moss-associated fungal communities to increased nitrogen load. Molecular Ecology, 26(2), 571–588. https://doi.org/10.1111/mec.13938
85. Dunthorn, M., Kauserud, H., Bass, D., Mayor, J., & Mahé, F. (2017). Yeasts dominate soil fungal communities in three lowland Neotropical rainforests. Environmental Microbiology Reports, 9(5), 668–675. https://doi.org/10.1111/1758-2229.12575
84. Grube, M., Gaya, E., Kauserud, H., Smith, A. M., Avery, S. V., Fernstad, S. J., Muggia, L., Martin, M. D., Eivindsen, T., Kõljalg, U., & Bendiksby, M. (2017). The next generation fungal diversity researcher. Fungal Biology Reviews, 31(3), 124–130. https://doi.org/10.1016/j.fbr.2017.02.001
83. Heegaard, E., Boddy, L., Diez, J. M., Halvorsen, R., Kauserud, H., Kuyper, T. W., Bässler, C., Büntgen, U., Gange, A. C., Krisai-Greilhuber, I., Andrew, C. J., Ayer, F., Høiland, K., Kirk, P. M., & Egli, S. (2017). Fine-scale spatiotemporal dynamics of fungal fruiting: prevalence, amplitude, range and continuity. Ecography, 40(8), 947–959. https://doi.org/10.1111/ecog.02256
82. Jacobsen, R. M., Kauserud, H., Sverdrup-Thygeson, A., Bjorbækmo, M. M., & Birkemoe, T. (2017). Wood-inhabiting insects can function as targeted vectors for decomposer fungi. Fungal Ecology, 29, 76–84. https://doi.org/10.1016/j.funeco.2017.06.006
81. Khomich, M., Davey, M. L., Kauserud, H., Rasconi, S., & Andersen, T. (2017). Fungal communities in Scandinavian lakes along a longitudinal gradient. Fungal Ecology, 27, 36–46. https://doi.org/10.1016/j.funeco.2017.01.008
80. Khomich, M., Kauserud, H., Logares, R., Rasconi, S., & Andersen, T. (2017). Planktonic protistan communities in lakes along a large-scale environmental gradient. FEMS Microbiology Ecology, 93(4). https://doi.org/10.1093/femsec/fiw231
79. Lorberau, K. E., Botnen, S. S., Mundra, S., Aas, A. B., Rozema, J., Eidesen, P. B., & Kauserud, H. (2017). Does warming by open-top chambers induce change in the root-associated fungal community of the arctic dwarf shrub Cassiope tetragona (Ericaceae)? Mycorrhiza, 27, 513–524. https://doi.org/10.1007/s00572-017-0767-y
78. Andrew, C., Heegaard, E., Halvorsen, R., Martinez-Peña, F., Egli, S., Kirk, P. M., Bässler, C., Büntgen, U., Aldea, J., Høiland, K., Boddy, L., & Kauserud, H. (2016). Climate impacts on fungal community and trait dynamics. Fungal Ecology, 22, 17–25. https://doi.org/10.1016/j.funeco.2016.03.005
77. Mundra, S., Halvorsen, R., Kauserud, H., Bahram, M., Tedersoo, L., Elberling, B., Cooper, E. J., & Eidesen, P. B. (2016). Ectomycorrhizal and saprotrophic fungi respond differently to long-term experimentally increased snow depth in the High Arctic. MicrobiologyOpen, 5(5), 856–869. https://doi.org/10.1002/mbo3.375
76. Rämä, T., Davey, M., Nordén, J., Halvorsen, R., Blaalid, R., Mathiassen, G., Alsos, I., & Kauserud, H. (2016). Fungi Sailing the Arctic Ocean: Speciose Communities in North Atlantic Driftwood as Revealed by High-Throughput Amplicon Sequencing. Microbial Ecology, 72, 295–304. https://doi.org/10.1007/s00248-016-0778-9
75. Balasundaram, S. V., Engh, I. B., Skrede, I., & Kauserud, H. (2015). How many DNA markers are needed to reveal cryptic fungal species? Fungal Biology, 119(10), 940–945. https://doi.org/10.1016/j.funbio.2015.07.006
74. Botnen, S., Kauserud, H., Carlsen, T., Blaalid, R., & Høiland, K. (2015). Mycorrhizal fungal communities in coastal sand dunes and heaths investigated by pyrosequencing analyses. Mycorrhiza, 25, 447–456. https://doi.org/10.1007/s00572-014-0624-1
73. Davey, M., Blaalid, R., Vik, U., Carlsen, T., Kauserud, H., & Eidesen, P. B. (2015). Primary succession of Bistorta vivipara (L.) Delabre (Polygonaceae) root-associated fungi mirrors plant succession in two glacial chronosequences. Environmental Microbiology, 17(8), 2777–2790. https://doi.org/10.1111/1462-2920.12770
72. Mundra, S., Bahram, M., Tedersoo, L., Kauserud, H., Halvorsen, R., & Eidesen, P. B. (2015). Temporal variation of Bistorta vivipara-associated ectomycorrhizal fungal communities in the High Arctic. Molecular Ecology, 24(24), 6289–6302. https://doi.org/10.1111/mec.13458
71. Mundra, S., Halvorsen, R., Kauserud, H., Müller, E., Vik, U., & Eidesen, P. B. (2015). Arctic fungal communities associated with roots of Bistorta vivipara do not respond to the same fine-scale edaphic gradients as the aboveground vegetation. New Phytologist, 205(4), 1587–1597. https://doi.org/10.1111/nph.13216
70. Negård, M., Uhlig, S., Kauserud, H., Andersen, T., Høiland, K., & Vrålstad, T. (2015). Links between Genetic Groups, Indole Alkaloid Profiles and Ecology within the Grass-Parasitic Claviceps purpurea Species Complex. Toxins, 7(5), 1431–1456. https://doi.org/10.3390/toxins7051431
69. Blaalid, R., Davey, M. L., Kauserud, H., Carlsen, T., Halvorsen, R., Høiland, K., & Eidesen, P. B. (2014). Arctic root-associated fungal community composition reflects environmental filtering. Molecular Ecology, 23(3), 649–659. https://doi.org/10.1111/mec.12622
68. Boddy, L., Büntgen, U., Egli, S., Gange, A. C., Heegaard, E., Kirk, P. M., Mohammad, A., & Kauserud, H. (2014). Climate variation effects on fungal fruiting. Fungal Ecology, 10, 20–33. https://doi.org/10.1016/j.funeco.2013.10.006
67. Botnen, S., Vik, U., Carlsen, T., Eidesen, P. B., Davey, M. L., & Kauserud, H. (2014). Low host specificity of root-associated fungi at an Arctic site. Molecular Ecology, 23(4), 975–985. https://doi.org/10.1111/mec.12646
66. Davey, M. L., Kauserud, H., & Ohlson, M. (2014). Forestry impacts on the hidden fungal biodiversity associated with bryophytes. FEMS Microbiology Ecology, 90(1), 313–325. https://doi.org/10.1111/1574-6941.12386
65. Maurice, S., Skrede, I., LeFloch, G., Barbier, G., & Kauserud, H. (2014). Population structure of Serpula lacrymans in Europe with an outlook to the French population. Mycologia, 106(5), 889–895. https://doi.org/10.3852/12-344
64. Nilsson, R. H., Hyde, K. D., Pawlowska, J., Ryberg, M., Tedersoo, L., Aas, A. B., Alias, S. A., Alves, A., Anderson, C. L., Antonelli, A., Arnold, A. E., Bahnmann, B., Bahram, M., Bengtsson-Palme, J., Berlin, A., Branco, S., Chomnunti, P., Dissanayake, A., Drenkhan, R., Friberg, H., Frøslev, T. G., Halwachs, B., Hartmann, M., Henricot, B., Jayawardena, R., Jumpponen, A., Kauserud, H., Koskela, S., Kulik, T., Liimatainen, K., Lindahl, B. D., Lindner, D., Liu, J. K., Maharachchikumbura, S., Manamgoda, D., Martinsson, S., Neves, M. A., Niskanen, T., Nylinder, S., Pereira, O. L., Pinho, D. B., Porter, T. M., Queloz, V., Riit, T., Sánchez-García, M., Sousa, F. de, Stefańczyk, E., Tadych, M., Takamatsu, S., Tian, Q., Udayanga, D., Unterseher, M., Wang, Z., Wikee, S., Yan, J., Larsson, E., Larsson, K. H., Kõljalg, U., & Abarenkov, K. (2014). Improving ITS sequence data for identification of plant pathogenic fungi. Fungal Diversity, 67, 11–19. https://doi.org/10.1007/s13225-014-0291-8
63. Rämä, T., Nordén, J., Davey, M. L., Mathiassen, G. H., Spatafora, J. W., & Kauserud, H. (2014). Fungi ahoy! Diversity on marine wooden substrata in the high North. Fungal Ecology, 8, 46–58. https://doi.org/10.1016/j.funeco.2013.12.002
62. Bellemain, E., Davey, M. L., Kauserud, H., Epp, L. S., Boessenkool, S., Coissac, E., Geml, J., Edwards, M., Willerslev, E., Gussarova, G., Taberlet, P., Haile, J., & Brochmann, C. (2013). Fungal palaeodiversity revealed using high-throughput metabarcoding of ancient DNA from arctic permafrost. Environmental Microbiology, 15(7), 2146–2146. https://doi.org/10.1111/1462-2920.12175
61. Blaalid, R., Kumar, S., Nilsson, R. H., Abarenkov, K., Kirk, P. M., & Kauserud, H. (2013). ITS1 versus ITS2 as DNA metabarcodes for fungi. Molecular Ecology Resources, 13(2), 218–224. https://doi.org/10.1111/1755-0998.12065
60. Büntgen, U., Peter, M., Kauserud, H., & Egli, S. (2013). Unraveling environmental drivers of a recent increase in Swiss fungi fruiting. Global Change Biology, 19(9), 2785–2794. https://doi.org/10.1111/gcb.12263
59. Davey, M. L., Heegaard, E., Halvorsen, R., Kauserud, H., & Ohlson, M. (2013). Amplicon-pyrosequencing-based detection of compositional shifts in bryophyte-associated fungal communities along an elevation gradient. Molecular Ecology, 22(2), 368–383. https://doi.org/10.1111/mec.12122
58. Davey, M. L., Heimdal, R., Ohlson, M., & Kauserud, H. (2013). Host- and tissue-specificity of moss-associated Galerina and Mycena determined from amplicon pyrosequencing data. Fungal Ecology, 6(3), 179–186. https://doi.org/10.1016/j.funeco.2013.02.003
57. Kauserud, H., Heegaard, E., Büntgen, U., Halvorsen, R., Egli, S., Senn-Irlet, B., Krisai-Greilhuber, I., Dämon, W., Nordén, J., Høiland, K., Kirk, P. M., Semenov, M., Stenseth, N. C., & Boddy, L. (2013). Reply to Gange et al.: Climate-driven changes in the fungal fruiting season in the United Kingdom. Proc. Natl. Acad. Sci. U.S.A., 110(5), E335–E335. https://doi.org/10.1073/pnas.1221131110
56. Lindahl, B. D., Nilsson, R. H., Tedersoo, L., Abarenkov, K., Carlsen, T., Kjøller, R., Kõljalg, U., Pennanen, T., Rosendahl, S., Stenlid, J., & Kauserud, H. (2013). Fungal community analysis by high-throughput sequencing of amplified markers - a user's guide. New Phytologist, 199(1), 288–299. https://doi.org/10.1111/nph.12243
55. Lindner, D. L., Carlsen, T., Nilsson, R. H., Davey, M., Schumacher, T., & Kauserud, H. (2013). Employing 454 amplicon pyrosequencing to reveal intragenomic divergence in the internal transcribed spacer rDNA region in fungi. Ecology and Evolution, 3(6), 1751–1764. https://doi.org/10.1002/ece3.586
54. Skaven Seierstad, K., Carlsen, T., Sætre, G. P., Miettinen, O., Hellik Hofton, T., & Kauserud, H. (2013). A phylogeographic survey of a circumboreal polypore indicates introgression among ecologically differentiated cryptic lineages. Fungal Ecology, 6(1), 119–128. https://doi.org/10.1016/j.funeco.2012.09.001
53. Skrede, I., Maurice, S., & Kauserud, H. (2013). Molecular Characterization of Sexual Diversity in a Population of Serpula lacrymans, a Tetrapolar Basidiomycete. G3-Genes Genomes Genetics, 3(2), 145–152. https://doi.org/10.1534/g3.112.003731
52. Vik, U., Logares, R., Blaalid, R., Halvorsen, R., Carlsen, T., Bakke, I., Kolstø, A. B., Økstad, O. A., & Kauserud, H. (2013). Different bacterial communities in ectomycorrhizae and surrounding soil. Scientific Reports, 3, 3471. https://doi.org/10.1038/srep03471
51. Yao, F., Vik, U., Brysting, A. K., Carlsen, T., Halvorsen, R., & Kauserud, H. (2013). Substantial compositional turnover of fungal communities in an alpine ridge-to-snowbed gradient. Molecular Ecology, 22(19), 5040–5052. https://doi.org/10.1111/mec.12437
50. Blaalid, R., Carlsen, T., Kumar, S., Halvorsen, R., Ugland, K. I., Fontana, G., & Kauserud, H. (2012). Changes in the root-associated fungal communities along a primary succession gradient analysed by 454 pyrosequencing. Molecular Ecology, 21(8), 1897–1908. https://doi.org/10.1111/j.1365-294X.2011.05214.x
49. Büntgen, U., Egli, S., Camarero, J. J., Fischer, E. M., Stobbe, U., Kauserud, H., Tegel, W., Sproll, L., & Stenseth, N. C. (2012). Drought-induced decline in Mediterranean truffle harvest. Nature Climate Change, 2, 827–829. https://doi.org/10.1038/nclimate1733
48. Büntgen, U., Kauserud, H., & Egli, S. (2012). Linking climate variability to mushroom productivity and phenology. Frontiers in Ecology and the Environment, 10(1), 14–19. https://doi.org/10.1890/110064
47. Carlsen, T., Aas, A. B., Lindner, D., Vrålstad, T., Schumacher, T., & Kauserud, H. (2012). Don't make a mista(g)ke: is tag switching an overlooked source of error in amplicon pyrosequencing studies? Fungal Ecology, 5(6), 747–749. https://doi.org/10.1016/j.funeco.2012.06.003
46. Carlsen, T., Bendiksby, M., Hofton, T. H., Reiso, S., Bakkestuen, V., Haugan, R., Kauserud, H., & Timdal, E. (2012). Species delimitation, bioclimatic range, and conservation status of the threatened lichen Fuscopannaria confusa. Lichenologist, 44(5), 565–575. https://doi.org/10.1017/S0024282912000199
45. Davey, M. L., Heegaard, E., Halvorsen, R., Ohlson, M., & Kauserud, H. (2012). Seasonal trends in the biomass and structure of bryophyte-associated fungal communities explored by 454 pyrosequencing. New Phytologist, 195(4), 844–856. https://doi.org/10.1111/j.1469-8137.2012.04215.x
44. Epp, L. S., Boessenkool, S., Bellemain, E. P., Haile, J., Esposito, A., Riaz, T., Erséus, C., Gusarov, V. I., Edwards, M. E., Johnsen, A., Stenøien, H. K., Hassel, K., Kauserud, H., Yoccoz, N. G., Bråthen, K., Willerslev, E., Taberlet, P., Coissac, E., & Brochmann, C. (2012). New environmental metabarcodes for analysing soil DNA: potential for studying past and present ecosystems. Molecular Ecology, 21(8), 1821–1833. https://doi.org/10.1111/j.1365-294X.2012.05537.x
43. Kauserud, H., Heegaard, E., Büntgen, U., Halvorsen, R., Egli, S., Senn-Irlet, B., Krisai-Greilhuber, I., Dämon, W., Sparks, T., Nordén, J., Høiland, K., Kirk, P., Semenov, M., Boddy, L., & Stenseth, N. C. (2012). Warming-induced shift in European mushroom fruiting phenology. Proc. Natl. Acad. Sci. U.S.A., 109(36), 14488–14493. https://doi.org/10.1073/pnas.1200789109
42. Kauserud, H., Kumar, S., Brysting, A. K., Nordén, J., & Carlsen, T. (2012). High consistency between replicate 454 pyrosequencing analyses of ectomycorrhizal plant root samples. Mycorrhiza, 22, 309–315. https://doi.org/10.1007/s00572-011-0403-1
41. Logares, R., Haverkamp, T. H. A., Kumar, S., Lanzén, A., Nederbragt, A. J., Quince, C., & Kauserud, H. (2012). Environmental microbiology through the lens of high-throughput DNA sequencing: Synopsis of current platforms and bioinformatics approaches. Journal of Microbiological Methods, 91(1), 106–113. https://doi.org/10.1016/j.mimet.2012.07.017
40. Skrede, I., Carlsen, T., Stensrud, O., & Kauserud, H. (2012). Genome wide AFLP markers support cryptic species in Coniophora (Boletales). Fungal Biology, 116(7), 778–784. https://doi.org/10.1016/j.funbio.2012.04.009
39. Vik, U., Carlsen, T., Eidesen, P. B., Brysting, A. K., & Kauserud, H. (2012). Microsatellite markers for Bistorta vivipara (Polygonaceae). American Journal of Botany, 99(6), E226–E229. https://doi.org/10.3732/ajb.1100504
38. Vik, U., Halvorsen, R., Ohlson, M., Rydgren, K., Carlsen, T., Korpelainen, H., & Kauserud, H. (2012). Microsatellite markers for Hylocomium splendens (Hylocomiaceae). American Journal of Botany, 99(9), E344–E346. https://doi.org/10.3732/ajb.1200028
37. Carlsen, T., Engh, I. B., Decock, C., Rajchenberg, M., & Kauserud, H. (2011). Multiple cryptic species with divergent substrate affinities in the Serpula himantioides species complex. Fungal Biology, 115(1), 54–61. https://doi.org/10.1016/j.funbio.2010.10.004
36. Eastwood, D. C., Floudas, D., Binder, M., Majcherczyk, A., Schneider, P., Aerts, A., Asiegbu, F. O., Baker, S. E., Barry, K., Bendiksby, M., Blumentritt, M., Coutinho, P. M., Cullen, D., de Vries, R. P., Gathman, A., Goodell, B., Henrissat, B., Ihrmark, K., Kauserud, H., Kohler, A., LaButti, K., Lapidus, A., Lavin, J. L., Lee, Y. H., Lindquist, E., Lilly, W., Lucas, S., Morin, E., Murat, C., Oguiza, J. A., Park, J., Pisabarro, A. G., Riley, R., Rosling, A., Salamov, A., Schmidt, O., Schmutz, J., Skrede, I., Stenlid, J., Wiebenga, A., Xie, X., Kües, U., Hibbett, D. S., Hoffmeister, D., Högberg, N., Martin, F., Grigoriev, I. V., & Watkinson, S. C. (2011). The Plant Cell Wall-Decomposing Machinery Underlies the Functional Diversity of Forest Fungi. Science, 333(6043), 762–765. https://doi.org/10.1126/science.1205411
35. Kauserud, H., Heegaard, E., Halvorsen, R., Boddy, L., Høiland, K., & Stenseth, N. C. (2011). Mushroom's spore size and time of fruiting are strongly related: is moisture important? Biology Letters, 7(2), 273–276. https://doi.org/10.1098/rsbl.2010.0820
34. Kumar, S., Carlsen, T., Mevik, B. H., Enger, P., Blaalid, R., Shalchian-Tabrizi, K., & Kauserud, H. (2011). CLOTU: An online pipeline for processing and clustering of 454 amplicon reads into OTUs followed by taxonomic annotation. BMC Bioinformatics, 12, 182. https://doi.org/10.1186/1471-2105-12-182
33. Nilsson, R. H., Tedersoo, L., Lindahl, B. D., Kjøller, R., Carlsen, T., Quince, C., Abarenkov, K., Pennanen, T., Stenlid, J., Bruns, T., Larsson, K. H., Kõljalg, U., & Kauserud, H. (2011). Towards standardization of the description and publication of next-generation sequencing datasets of fungal communities. New Phytologist, 191(2), 314–318. https://doi.org/10.1111/j.1469-8137.2011.03755.x
32. Skrede, I., Engh, I. B., Binder, M., Carlsen, T., Kauserud, H., & Bendiksby, M. (2011). Evolutionary history of Serpulaceae (Basidiomycota): molecular phylogeny, historical biogeography and evidence for a single transition of nutritional mode. BMC Evolutionary Biology, 11, 230. https://doi.org/10.1186/1471-2148-11-230
31. Bellemain, E., Carlsen, T., Brochmann, C., Coissac, E., Taberlet, P., & Kauserud, H. (2010). ITS as an environmental DNA barcode for fungi: an in silico approach reveals potential PCR biases. BMC Microbiology, 10, 189. https://doi.org/10.1186/1471-2180-10-189
30. Bjorbækmo, M. F. M., Carlsen, T., Brysting, A., Vrålstad, T., Høiland, K., Ugland, K. I., Geml, J., Schumacher, T., & Kauserud, H. (2010). High diversity of root associated fungi in both alpine and arctic Dryas octopetala. BMC Plant Biology, 10, 244. https://doi.org/10.1186/1471-2229-10-244
29. Engh, I. B., Carlsen, T., Sætre, G. P., Högberg, N., Doi, S., & Kauserud, H. (2010). Two invasive populations of the dry rot fungus Serpula lacrymans show divergent population genetic structures. Molecular Ecology, 19(4), 706–715. https://doi.org/10.1111/j.1365-294X.2009.04505.x
28. Engh, I. B., Skrede, I., Sætre, G. P., & Kauserud, H. (2010). High variability in a mating type linked region in the dry rot fungus Serpula lacrymans caused by frequency-dependent selection? BMC Genetics, 11, 64. https://doi.org/10.1186/1471-2156-11-64
27. Kauserud, H., Heegaard, E., Semenov, M. A., Boddy, L., Halvorsen, R., Stige, L. C., Sparks, T. H., Gange, A. C., & Stenseth, N. C. (2010). Climate change and spring-fruiting fungi. Proc. R. Soc. B, 277(1685), 1169–1177. https://doi.org/10.1098/rspb.2009.1537
26. Vik, U., Jørgensen, M. H., Kauserud, H., Nordal, I., & Brysting, A. K. (2010). Microsatellite markers show decreasing diversity but unchanged level of clonality in Dryas octopetala (Rosaceae) with increasing latitude. American Journal of Botany, 97(6), 988–997. https://doi.org/10.3732/ajb.0900215
25. Davey, M. L., Nybakken, L., Kauserud, H., & Ohlson, M. (2009). Fungal biomass associated with the phyllosphere of bryophytes and vascular plants. Mycological Research, 113(111), 1254–1260. https://doi.org/10.1016/j.mycres.2009.08.001
24. Kauserud, H., Colman, J. E., & Ryvarden, L. (2008). Relationship between basidiospore size, shape and life history characteristics: a comparison of polypores. Fungal Ecology, 1(1), 19–23. https://doi.org/10.1016/j.funeco.2007.12.001
23. Kauserud, H., Mathiesen, C., & Ohlson, M. (2008). High diversity of fungi associated with living parts of boreal forest bryophytes. Botany, 86, 11, 1326–1333. https://doi.org/10.1139/B08-102
22. Kauserud, H., Stige, L. C., Vik, J. O., Økland, R. H., Høiland, K., & Stenseth, N. C. (2008). Mushroom fruiting and climate change. Proc. Natl. Acad. Sci. U.S.A., 105, 10, 3811–3814. https://doi.org/10.1073/pnas.0709037105
21. Wollan, A. K., Bakkestuen, V., Kauserud, H., Gulden, G., & Halvorsen, R. (2008). Modelling and predicting fungal distribution patterns using herbarium data. Journal of Biogeography, 35(12), 2298–2310. https://doi.org/10.1111/j.1365-2699.2008.01965.x
20. Kauserud, H., Hofton, T. H., & Sætre, G. P. (2007). Pronounced ecological separation between two closely related lineages of the polyporous fungus Gloeoporus taxicola. Mycological Research, 111(7), 778–786. https://doi.org/10.1016/j.mycres.2007.03.005
19. Kauserud, H., Shalchian-Tabrizi, K., & Decock, C. (2007). Multilocus sequencing reveals multiple geographically structured lineages of Coniophora arida and C. olivacea (Boletales) in North America. Mycologia, 99(5), 705–713. https://doi.org/10.1080/15572536.2007.11832534
18. Kauserud, H., Svegården, I. B., Decock, C., & Hallenberg, N. (2007). Hybridization among cryptic species of the cellar fungus Coniophora puteana (Basidiomycota). Molecular Ecology, 16(2), 389–399. https://doi.org/10.1111/j.1365-294X.2006.03129.x
17. Kauserud, H., Svegården, I. B., Sætre, G. P., Knudsen, H., Stensrud, O., Schmidt, O., Doi, S., Sugiyama, T., & Högberg, N. (2007). Asian origin and rapid global spread of the destructive dry rot fungus Serpula lacrymans. Molecular Ecology, 16(16), 3350–3360. https://doi.org/10.1111/j.1365-294X.2007.03387.x
16. Shalchian-Tabrizi, K., Kauserud, H., Massana, R., Klaveness, D., & Jakobsen, K. S. (2007). Analysis of Environmental 18S Ribosomal RNA Sequences reveals Unknown Diversity of the Cosmopolitan Phylum Telonemia. Protist, 158(2), 173–180. https://doi.org/10.1016/j.protis.2006.10.003
15. Stensrud, O., Schumacher, T., Shalchian-Tabrizi, K., Svegården, I. B., & Kauserud, H. (2007). Accelerated nrDNA evolution and profound AT bias in the medicinal fungus Cordyceps sinensis. Mycological Research, 111(4), 409–415. https://doi.org/10.1016/j.mycres.2007.01.015
14. Högberg, N., Svegården, I. B., & Kauserud, H. (2006). Isolation and characterization of 15 polymorphic microsatellite markers for the devastating dry rot fungus, Serpula lacrymans. Molecular Ecology Notes, 6(4), 1022–1024. https://doi.org/10.1111/j.1471-8286.2006.01416.x
13. Kauserud, H., Stensrud, O., Decock, C., Shalchian-Tabrizi, K., & Schumacher, T. (2006). Multiple gene genealogies and AFLPs suggest cryptic speciation and long-distance dispersal in the basidiomycete Serpula himantioides (Boletales). Molecular Ecology, 15(2), 421–431. https://doi.org/10.1111/j.1365-294X.2005.02768.x
12. Kauserud, H., Sætre, G. P., Schmidt, O., Decock, C., & Schumacher, T. (2006). Genetics of self/nonself recognition in Serpula lacrymans. Fungal Genetics and Biology, 43(7), 503–510. https://doi.org/10.1016/j.fgb.2006.02.004
11. Gulden, G., Stensrud, O., Shalchian-Tabrizi, K., & Kauserud, H. (2005). Galerina Earle: A polyphyletic genus in the consortium of dark-spored agarics. Mycologia, 97(4), 823–837. https://doi.org/10.1080/15572536.2006.11832774
10. Kauserud, H., Lie, M., Stensrud, O., & Ohlson, M. (2005). Molecular characterization of airborne fungal spores in boreal forests of contrasting human disturbance. Mycologia, 97(6), 1215–1224.
9. Kauserud, H. (2004). Widespread vegetative compatibility groups in the dry-rot fungus Serpula lacrymans. Mycologia, 96(2), 232–239. https://doi.org/10.1080/15572536.2005.11832973
8. Kauserud, H., Högberg, N., Knudsen, H., Elborne, S. A., & Schumacher, T. (2004). Molecular phylogenetics suggest a North American link between the anthropogenic dry rot fungus Serpula lacrymans and its wild relative S. himantioides. Molecular Ecology, 13(10), 3137–3146. https://doi.org/10.1111/j.1365-294X.2004.02307.x
7. Kauserud, H., Schmidt, O., Elfstrand, M., & Högberg, N. (2004). Extremely low AFLP variation in the European dry rot fungus (Serpula lacrymans): implications for self/nonself-recognition. Mycological Research, 108(11), 1264–1270. https://doi.org/10.1017/S095375620400108x
6. Stokland, J., & Kauserud, H. (2004). Phellinus nigrolimitatus—a wood-decomposing fungus highly influenced by forestry. Forest Ecology and Management, 187(2-3), 333–343. https://doi.org/10.1016/j.foreco.2003.07.004
5. Kauserud, H., & Schumacher, T. (2003). Genetic structure of Fennoscandian populations of the threatened wood-decay fungus Fomitopsis rosea (Basidiomycota). Mycological Research, 107(2), 155–163. https://doi.org/10.1017/S0953756203007214
4. Kauserud, H., & Schumacher, T. (2003). Regional and local population structure of the pioneer wood-decay fungus Trichaptum abietinum. Mycologia, 95(3), 416–425. https://doi.org/10.1080/15572536.2004.11833086
3. Kauserud, H., & Schumacher, T. (2003). Ribosomal DNA variation, recombination and inheritance in the basidiomycete Trichaptum abietinum: implications for reticulate evolution. Heredity, 91, 163–172. https://doi.org/10.1038/sj.hdy.6800294
2. Kauserud, H., & Schumacher, T. (2002). Population structure of the endangered wood decay fungus Phellinus nigrolimitatus (Basidiomycota). Canadian Journal of Botany, 80, 6, 597–606. https://doi.org/10.1139/b02-040
1. Kauserud, H., & Schumacher, T. (2001). Outcrossing or inbreeding: DNA markers provide evidence for type of reproductive mode in Phellinus nigrolimitatus (Basidiomycota). Mycological Research, 105(6), 676–683. https://doi.org/10.1017/S0953756201004191
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Nov. 3, 2010 3:29 PM
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