Bernd Thiede

Bilde av Bernd Thiede
English version of this page
Telefon +47 22840533
Rom 2303A
Brukernavn
Besøksadresse Blindernveien 31 0371 Oslo
Postadresse Postboks 1066 Blindern 0316 Oslo

Faglige interesser

Massespektrometri, proteomikk

Undervisning

BIOS3900

BIOS9980

BIOS4020
 

Bakgrunn

Proteomikk

Priser

 

Verv

 

Samarbeid

 

Emneord: Proteomikk, Massespektrometri, Biokjemi, Molekylærbiologi

Publikasjoner

1. Koehler, C.J., Arntzen, M.Ø., de Souza, G.A., Thiede, B. (2013) An approach for triplex-isobaric peptide termini labeling (Triplex-IPTL). Anal. Chem., 85, 2478-2485.

2. Thiede, B., Koehler, C.J., Strozynski, M., Treumann, A., Stein, R., Zimny-Arndt, U., Schmid, M., Jungblut, P.R. (2013) High resolution quantitative proteomics of HeLa cells protein species using stable isotope labeling with amino acids in cell culture (SILAC), two-dimensional gel electrophoresis (2DE) and nano-liquid chromatography coupled to an LTQ-Orbitrap mass spectrometer. Mol. Cell. Proteomics, 12, 529-538.

3. Arntzen, M.A., Boddie, P., Frick, R., Koehler, C.J., Thiede, B. (2015) Consolidation of proteomics data in the Cancer proteomics database. Proteomics, 15, 3765-3771.

4. Trung, T.T., Strozynski, M.A., Thiede, B. (2017) Quantitative phosphoproteome analysis of cisplatin-induced apoptosis in Jurkat T cells, Proteomics, 17, 1600470.

5. Trung, T.T., Bollineni, R.C., Strozynski, M.A., Koehler, C.J., Thiede, B. (2017) Identification of alternative splice variants using unique tryptic peptide sequences for database searches, J. Proteome Res., 16, 2571-2578.

6. Bollineni, R.C., Koehler, C.J., Gislefoss, R.E., Anonsen, J.H., Thiede, B. (2018) Large-scale intact glycopeptide identification by Mascot database search. Sci. Rep. 8, 2117.

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  • Hanson, Ingunn; Edin, Nina Frederike J; Thiede, Bernd & Altanerova, Ursula (2020). Communication of radioprotective efects by TGF-β3.
  • Berg, Henriette Engen; Halldórsson, Skarphéðinn; Thiede, Bernd; Vik-Mo, Einar O.; Lundanes, Elsa & Wilson, Steven Ray Haakon (2020). Micro pillar array columns for comprehensive proteomics.
  • Hanson, Ingunn; Altanerova, Ursula; Thiede, Bernd & Edin, Nina Frederike J (2020). Radioprotector TGF-β3 is secreted in exosomes and activated by LDR priming.
  • Bollineni, Ravi Chand; Koehler, Christian; Gislefoss, Randi Elin; Anonsen, Jan Haug & Thiede, Bernd (2018). Author Correction: Large-scale intact glycopeptide identification by Mascot database search. Scientific Reports. ISSN 2045-2322. 8. doi: 10.1038/s41598-018-28147-w
  • Khan, Ayyad Ahmad Zartasht; Jackson, Catherine; Reppe, Sjur; Utheim, Tor Paaske; Olstad, Ole Kristoffer & Thiede, Bernd [Vis alle 7 forfattere av denne artikkelen] (2018). Sericin-Induced Melanogenesis in Cultured Retinal Pigment Epithelium is Associated with Elevated Levels of Hydrogen Peroxide.
  • Eriksen, Gunnar Sundstøl; Thiede, Bernd & Solhaug, Anita (2018). Effects of an emerging Fusarium mycotoxin on hepatocytes.
  • Berg, Henriette Engen; Skottvoll, Frøydis Sved; Bjørseth, Kamilla; Sæterdal, Kristina Erikstad; Brandtzaeg, Ole Kristian & Vehus, Tore [Vis alle 11 forfattere av denne artikkelen] (2018). Development of nanoLC column technology for proteomic studies .
  • Sved Skottvoll, Frøydis; Lund, Kaja; Røberg-Larsen, Hanne; Berg, Henriette Sjånes; Thiede, Bernd & Lundanes, Elsa [Vis alle 7 forfattere av denne artikkelen] (2017). Diagnostic potential of exosomes: The purification issue.
  • López-Soop, Graciela; Rønningen, Torunn; Rogala, Agnieszka; Richartz, Nina; Blomhoff, Heidi Kiil & Thiede, Bernd [Vis alle 8 forfattere av denne artikkelen] (2017). AKAP95 interacts with nucleoporin TPR in mitosis and is important for the spindle assembly checkpoint. Cell Cycle. ISSN 1538-4101. 16(10), s. 947–956. doi: 10.1080/15384101.2017.1310350.
  • Jungblut, Peter R.; Thiede, Bernd & Schluter, H (2016). Towards deciphering proteomes via the proteoform, protein speciation, moonlighting and protein code concepts. Journal of Proteomics. ISSN 1874-3919. 134, s. 1–4. doi: 10.1016/j.jprot.2016.01.012
  • Jensen, Janicke Liaaen; Utheim, Øygunn Aass; Chen, Xiangjun; Thiede, Bernd; Aqrawi, Lara Adnan & Rusthen, Shermin [Vis alle 9 forfattere av denne artikkelen] (2016). Searching for Disease Biomarkers for Primary Sjögren’s Syndrome Based on Oral and Ocular Patient Examinations.
  • Lopez Soop, Graciela; Reiner, Andrew Henry; Thiede, Bernd; Collas, Philippe & Küntziger, Thomas Michel (2015). Regulation of Normal Mitotic Progression by A-kinase Anchoring Protein 95 (AKAP95).
  • Bousquet, Paula; Abshiru, Nebiyu; Sandvik, Joe Alexander; Pettersen, Erik O; Thiede, Bernd & Woods, Robert [Vis alle 8 forfattere av denne artikkelen] (2014). Anti-tumor antibodies and hypoxia.
  • Perdreau, Harmonie; Guldsten, Hanne; Progida, Cinzia; Thiede, Bernd; Bakke, Oddmund & Morth, Jens Preben (2014). Molecular and Structural Characterization of Sjögren syndrome/scleroderma autoantigen 1 (SSSCA1).
  • Perdreau, Harmonie; Barfeld, Stefan; Guldsten, Hanne; Thiede, Bernd; Mills, Ian Geoffrey & Morth, Jens Preben (2013). Molecular and Structural Characterization of Sjögren syndrome/scleroderma autoantigen 1, a new binding partner of Tankyrase regulated by the oncogene c-Myc.
  • Bousquet, Paula; Abshiru, Nebiyu; Johansen, Rune Forstrøm; Bjørås, Magnar; Sandvik, Joe Alexander & Pettersen, Erik O [Vis alle 10 forfattere av denne artikkelen] (2013). A structural and functional study of anti-ganglioside antibodies. International Journal of Molecular Medicine. ISSN 1107-3756. 32, s. S42–S42.
  • Arntzen, Magnus & Thiede, Bernd (2013). Cell Death Proteomics.
  • Khan, Rabia; Rukke, Håkon Valen; Filho, Antonio Pedro Ricomini; Fimland, Gunnar; Arntzen, Magnus & Thiede, Bernd [Vis alle 7 forfattere av denne artikkelen] (2012). Extracellular Identification of a Processed Type II ComR/ComS Pheromone of Streptococcus mutans. Journal of Bacteriology. ISSN 0021-9193. 194(15), s. 3781–3788. doi: 10.1128/%E2%80%8BJB.00624-12 Fulltekst i vitenarkiv
  • Demko, Viktor; Ako, Ako Eugene; Perroud, Pierre-Francois; Liang, Zhe; Johansen, Wenche & Wilson, Robert [Vis alle 10 forfattere av denne artikkelen] (2012). Searching for cellular targets of the plant calpain DEK1.
  • Bousquet, Paula; Thiede, Bernd; Moreno, Ernesto & Krengel, Ute (2012). Antitumor antibodies - Crystallization and MS analysis.
  • Arntzen, Magnus & Thiede, Bernd (2012). Apoptoproteomics.
  • Arntzen, Magnus & Thiede, Bernd (2012). ApoptoProteomics: An integrated database for analysis of proteomics data obtained from apoptotic cells.
  • Thiede, Bernd; Koehler, Christian; Strozynski, Margarita Anna; Treumann, A; Stein, Robert & Zimny-Amdt, Ursula [Vis alle 8 forfattere av denne artikkelen] (2012). Protein species high resolution quantitative proteomics of HeLa cells using SILAC-2-DE-nanoLC/LTQ-Orbitrap mass spectrometry. Molecular & Cellular Proteomics. ISSN 1535-9476. doi: 10.1074/mcp.M112.019372
  • Arntzen, Magnus; Koehler, Christian; Barsnes, Harald; Berven, Frode; Treumann, Achim & Thiede, Bernd (2011). IsobariQ: Software for isobaric quantitative proteomics using IPTL, iTRAQ and TMT.
  • Bousquet, Paula; Thiede, Bernd; Moreno, Ernesto & Krengel, Ute (2011). Antitumor antibodies – Crystallization and MS analysis.
  • Köhler, Christian Jeffrey; Thiede, Bernd; Lundanes, Elsa & Greibrokk, Tyge (2013). Isobaric peptide termini labeling (IPTL) - An alternative approach for quantitative proteomics. Universitetet i Oslo.

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Publisert 12. nov. 2015 15:22 - Sist endret 24. nov. 2020 08:26

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