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Publikasjoner
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Pizzi, Eleonora; Halvorsen, Trine Grønhaug; Koehler, Christian & Reubsaet, Leon (2021). Next-Generation Dried Blood Spot Samplers for Protein Analysis: Describing Trypsin-Modified Smart Sampling Paper. Separations. ISSN 2297-8739. 8(5). doi: 10.3390/separations8050066. Fulltekst i vitenarkiv
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Thiede, Bernd & Koehler, Christian (2021). An Approach for Triplex-IPTL. I Marcus, Katrin; Eisenacher, Martin & Sitek, Barbara (Red.), Quantitative Methods in Proteomics. Humana Press. ISSN 978-1-0716-1023-7. s. 133–144. doi: 10.1007/978-1-0716-1024-4_10. Fulltekst i vitenarkiv
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Johannsen, Christina; Koehler, Christian & Thiede, Bernd (2021). Comparison of LFQ and IPTL for Protein Identification and Relative Quantification. Molecules. ISSN 1431-5157. 26(17). doi: 10.3390/molecules26175330. Fulltekst i vitenarkiv
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Koehler, Christian & Thiede, Bernd (2019). Predominant cleavage of proteins N-terminal to serines and threonines using scandium(III) triflate. JBIC Journal of Biological Inorganic Chemistry. ISSN 0949-8257. 25, s. 61–66. doi: 10.1007/s00775-019-01733-7. Fulltekst i vitenarkiv
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Tran, Trung; Bollineni, Ravi Chand; Koehler, Christian & Thiede, Bernd (2018). Absolute two-point quantification of proteins using dimethylated proteotypic peptides. The Analyst. ISSN 0003-2654. 143(18), s. 4359–4365. doi: 10.1039/c8an01081a.
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Bollineni, Ravi Chand; Koehler, Christian; Gislefoss, Randi Elin; Anonsen, Jan Haug & Thiede, Bernd (2018). Large-scale intact glycopeptide identification by Mascot database search. Scientific Reports. ISSN 2045-2322. 8. doi: 10.1038/s41598-018-20331-2. Fulltekst i vitenarkiv
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Dugarte, Maria Eugenia Chollet; Andersen, Elisabeth; Skarpen, Ellen; Myklebust, Christiane Filion; Koehler, Christian & Morth, Jens Preben [Vis alle 12 forfattere av denne artikkelen] (2018). Factor VII deficiency: Unveiling the cellular and molecular mechanisms underlying Three model alterations of the enzyme catalytic domain. Biochimica et Biophysica Acta - Molecular Basis of Disease. ISSN 0925-4439. 1864(3), s. 660–667. doi: 10.1016/j.bbadis.2017.12.016.
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Tran, Trung; Bollineni, Ravi Chand; Strozynski, Margarita Anna; Koehler, Christian & Thiede, Bernd (2017). Identification of Alternative Splice Variants Using Unique Tryptic Peptide Sequences for Database Searches. Journal of Proteome Research. ISSN 1535-3893. 16(7), s. 2571–2578. doi: 10.1021/acs.jproteome.7b00126.
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Koehler, Christian; Bollineni, Ravi Chand & Thiede, Bernd (2017). Application of the half decimal place rule to increase the peptide identification rate. Rapid Communications in Mass Spectrometry. ISSN 0951-4198. 31(2), s. 227–233. doi: 10.1002/rcm.7780. Fulltekst i vitenarkiv
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Chymkowitch, Pierre; Nguéa P, Aurélie; Aanes, Håvard; Koehler, Christian; Thiede, Bernd & Lorenz, Susanne [Vis alle 9 forfattere av denne artikkelen] (2015). Sumoylation of Rap1 mediates the recruitment of TFIID to promote transcription of ribosomal protein genes. Genome Research. ISSN 1088-9051. 25(6), s. 897–906. doi: 10.1101/gr.185793.114.
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Øverbye, Anders; Skotland, Tore; Koehler, Christian; Thiede, Bernd; Seierstad, Therese & Berge, Viktor [Vis alle 8 forfattere av denne artikkelen] (2015). Identification of prostate cancer biomarkers in urinary exosomes. OncoTarget. ISSN 1949-2553. 6(30), s. 30357–30376. doi: 10.18632/oncotarget.4851.
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Arntzen, Magnus Øverlie; Boddie, Paul; Frick, Rahel; Koehler, Christian & Thiede, Bernd (2015). Consolidation of proteomics data in the Cancer proteomics database. Proteomics. ISSN 1615-9853. 15(22), s. 3765–3771. doi: 10.1002/pmic.201500144.
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Koehler, Christian; Arntzen, Magnus Øverlie & Thiede, Bernd (2015). The impact of carbon-13 and deuterium on relative quantification of proteins using stable isotope diethyl labeling. Rapid Communications in Mass Spectrometry. ISSN 0951-4198. 29(9), s. 830–836. doi: 10.1002/rcm.7170.
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Størvold, Gro Leite; Landskron, Johannes; Strozynski, Margarita Anna; Arntzen, Magnus; Koehler, Christian & Kalland, Maria Elisabeth [Vis alle 8 forfattere av denne artikkelen] (2013). Quantitative profiling of tyrosine phosphorylation revealed changes in the activity of the T cell receptor signaling pathway upon cisplatin-induced apoptosis. Journal of Proteomics. ISSN 1874-3919. 91, s. 344–357. doi: 10.1016/j.jprot.2013.07.019.
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Thiede, Bernd; Koehler, Christian; Strozynski, Margarita Anna; Treumann, Achim; Stein, Robert & Zimny-Arndt, Ursula [Vis alle 8 forfattere av denne artikkelen] (2013). High Resolution Quantitative Proteomics of HeLa Cells Protein Species Using Stable Isotope Labeling with Amino Acids in Cell Culture(SILAC), Two-Dimensional Gel Electrophoresis(2DE) and Nano-Liquid Chromatograpohy Coupled to an LTQ-OrbitrapMass Spectrometer. Molecular & Cellular Proteomics. ISSN 1535-9476. 12(2), s. 529–538. doi: 10.1074/mcp.M112.019372.
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Koehler, Christian; Arntzen, Magnus; De Souza, Gustavo Antonio & Thiede, Bernd (2013). An Approach for Triplex-Isobaric Peptide Termini Labeling (Triplex-IPTL). Analytical Chemistry. ISSN 0003-2700. 85(4), s. 2478–2485. doi: 10.1021/ac3035508.
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Koehler, Christian; Arntzen, Magnus; Treumann, Achim & Thiede, Bernd (2012). A Rapid Approach for Isobaric Peptide Termini Labeling. Methods in molecular biology. ISSN 1064-3745. 893, s. 129–141. doi: 10.1007/978-1-61779-885-6_10.
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Koehler, Christian; Arntzen, Magnus; Treumann, Achim & Thiede, Bernd (2012). Comparison of data analysis parameters and MS/MS fragmentation techniques for quantitative proteome analysis using isobaric peptide termini labeling (IPTL). Analytical and Bioanalytical Chemistry. ISSN 1618-2642. 404(4), s. 1103–1114. doi: 10.1007/s00216-012-5949-z.
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Arntzen, Magnus; Koehler, Christian; Treumann, Achim & Thiede, Bernd (2011). Quantitative proteome analysis using isobaric peptide termini labeling (IPTL). Methods in molecular biology. ISSN 1064-3745. 753, s. 65–76. doi: 10.1007/978-1-61779-148-2_5.
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Kozielski, Frank; Riaz, Tahira; DeBonis, Salvatore; Koehler, Christian; Panse, Isabel & Strozynski, Margarita Anna [Vis alle 9 forfattere av denne artikkelen] (2011). Proteome analysis of microtubule-associated proteins and their interacting partners from mammalian brain. Amino Acids. ISSN 0939-4451. 41(2), s. 363–385. doi: 10.1007/s00726-010-0649-5.
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Schmidt, Frank; Dahlmann, Burkhardt; Hustoft, Hanne Kolsrud; Koehler, Christian; Strozynski, Margarita Anna & Kloss, Alexander [Vis alle 9 forfattere av denne artikkelen] (2011). Quantitative proteome analysis of the 20S proteasome of apoptotic Jurkat T cells. Amino Acids. ISSN 0939-4451. 41(2), s. 351–361. doi: 10.1007/s00726-010-0575-6.
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Koehler, Christian; Arntzen, Magnus; Strozynski, Margarita Anna; Treumann, Achim & Thiede, Bernd (2011). Isobaric Peptide Termini Labeling Utilizing Site-Specific N-Terminal Succinylation. Analytical Chemistry. ISSN 0003-2700. 83(12), s. 4775–4781. doi: 10.1021/ac200229w.
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Arntzen, Magnus; Koehler, Christian; Barsnes, Harald; Berven, Frode; Treumann, Achim & Thiede, Bernd (2011). IsobariQ: Software for Isobaric Quantitative Proteomics using IPTL, iTRAQ, and TMT. Journal of Proteome Research. ISSN 1535-3893. 10(2), s. 913–920. doi: 10.1021/pr1009977.
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Schmidt, Frank; Dahlmann, Burkhardt; Hustoft, Hanne Kolsrud; Koehler, Christian; Strozynski, Margarita Anna & Klof, Alexander [Vis alle 9 forfattere av denne artikkelen] (2010). Quantitative proteome analysis of the 20S proteasome of apoptotic Jurkat T cells. Amino Acids. ISSN 0939-4451. doi: 10.1007/s00726-010-0575-6.
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Kozielski, Frank; Riaz, Tahira; DeBonis, Salvatore; Koehler, Christian; Kröning, Mario & Panse, Isabel [Vis alle 9 forfattere av denne artikkelen] (2010). Proteome analysis of microtubule-associated proteins and their interacting partners from mammalian brain. Amino Acids. ISSN 0939-4451. doi: 10.1007/s00726-010-0649-5.
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Dørum, Siri; Arntzen, Magnus; Qiao, Shuo Wang; Holm, Anders; Koehler, Christian & Thiede, Bernd [Vis alle 8 forfattere av denne artikkelen] (2010). The Preferred Substrates for Transglutaminase 2 in a Complex Wheat Gluten Digest Are Peptide Fragments Harboring Celiac Disease T-Cell Epitopes. PLOS ONE. ISSN 1932-6203. 5(11). doi: 10.1371/journal.pone.0014056. Vis sammendrag
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Saunders, Threrese Solstad; Bjørgo, Elisa; Koehler, Christian; Strozynski, Margarita Anna; Torgersen, Knut Martin & Tasken, Kjetil [Vis alle 7 forfattere av denne artikkelen] (2010). Quantitative proteome analysis of detergent-resistant membranes identifies the differential regulation of protein kinase C isoforms in apoptotic T cells. Proteomics. ISSN 1615-9853. 10(15), s. 2758–2768. doi: 10.1002/pmic.201000164.
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Tomazella, Gisele Guiqardi; daSilva, Idalete; Thomé, Carolina H.; Greene, Lewis J; Koehler, Christian J & Thiede, Bernd [Vis alle 8 forfattere av denne artikkelen] (2010). Analysis of detergent-insoluble and whole cell lysate fractions of resting neutrophils using high-resolution mass spectrometry. Journal of Proteome Research. ISSN 1535-3893. 9(4), s. 2030–2036. doi: 10.1021/pr1000253. Vis sammendrag
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De Souza, Gustavo; Fortuin, Suereta; Aguilar, Diana; Pando, Rogelio Hernandez; McEvoy, Christopher R.E. & van Helden, Paul D. [Vis alle 10 forfattere av denne artikkelen] (2010). Using a Label-free Proteomics Method to Identify Differentially Abundant Proteins in Closely Related Hypo- and Hypervirulent Clinical Mycobacterium tuberculosis Beijing Isolates. Molecular & Cellular Proteomics. ISSN 1535-9476. 9(11), s. 2414–2423. doi: 10.1074/mcp.M900422-MCP200. Vis sammendrag
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de Souza, GA; De Souza, Gustavo; Softeland, T; Søfteland, Tina; Koehler, Christian J & Thiede, Bernd [Vis alle 7 forfattere av denne artikkelen] (2009). Validating divergent ORF annotation of the Mycobacterium leprae genome through a full translation dataset and peptide identification by tandem mass spectrometry. Proteomics. ISSN 1615-9853. 9(12), s. 3233–3243. doi: 10.1002/pmic.200800955. Vis sammendrag
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Koehler, Christian; Strozynski, Margarita Anna; Kozielski, F; Treumann, A & Thiede, Bernd (2009). Isobaric Peptide Termini Labeling for MS/MS-Based Quantitative Proteomics. Journal of Proteome Research. ISSN 1535-3893. 8(9), s. 4333–4341. doi: 10.1021/pr900425n.
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Bollineni, Ravi Chand; Koehler, Christian; Gislefoss, Randi Elin; Anonsen, Jan Haug & Thiede, Bernd (2018). Author Correction: Large-scale intact glycopeptide identification by Mascot database search. Scientific Reports. ISSN 2045-2322. 8. doi: 10.1038/s41598-018-28147-w.
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Thiede, Bernd; Koehler, Christian; Strozynski, Margarita Anna; Treumann, A; Stein, Robert & Zimny-Amdt, Ursula [Vis alle 8 forfattere av denne artikkelen] (2012). Protein species high resolution quantitative proteomics of HeLa cells using SILAC-2-DE-nanoLC/LTQ-Orbitrap mass spectrometry. Molecular & Cellular Proteomics. ISSN 1535-9476. doi: 10.1074/mcp.M112.019372.
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Arntzen, Magnus; Koehler, Christian; Barsnes, Harald; Berven, Frode; Treumann, Achim & Thiede, Bernd (2011). IsobariQ: Software for isobaric quantitative proteomics using IPTL, iTRAQ and TMT.
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De Souza, Gustavo; Fortuin, Suereta; McEvoy, Christopher R; Pando, Rogelio Hernandez; Koehler, Christian J & Thiede, Bernd [Vis alle 8 forfattere av denne artikkelen] (2009). A label-free method identified differentially abundant proteins in related M.tuberculosis Beijing strains.
Publisert
1. mars 2016 09:50
- Sist endret
1. mars 2016 14:50