Christian Koehler
Overingeniør
-
Seksjon for biokjemi og molekylærbiologi

English version of this page
E-post
christian.koehler@ibv.uio.no
Telefon
+47 22840512
Brukernavn
Besøksadresse
Blindernveien 31
0371 Oslo
Postadresse
Postboks 1066 Blindern
0316 Oslo
http://www.mn.uio.no/ibv/english/people/aca/chriskoe/index.html
Publikasjoner
- Koehler, Christian & Thiede, Bernd (2019). Predominant cleavage of proteins N-terminal to serines and threonines using scandium(III) triflate. Journal of Biological Inorganic Chemistry. ISSN 0949-8257. 25, s 61- 66 . doi: 10.1007/s00775-019-01733-7 Fulltekst i vitenarkiv.
- Bollineni, Ravi Chand; Koehler, Christian; Gislefoss, Randi Elin; Anonsen, Jan Haug & Thiede, Bernd (2018). Large-scale intact glycopeptide identification by Mascot database search. Scientific Reports. ISSN 2045-2322. 8 . doi: 10.1038/s41598-018-20331-2 Fulltekst i vitenarkiv.
- Dugarte, Maria Eugenia Chollet; Andersen, Elisabeth; Skarpen, Ellen; Myklebust, Christiane Filion; Koehler, Christian; Morth, Jens Preben; Chuansumrit, Ampaiwan; Pinotti, Mirko; Bernardi, Francesco; Thiede, Bernd; Sandset, Per Morten & Skretting, Grethe (2018). Factor VII deficiency: Unveiling the cellular and molecular mechanisms underlying Three model alterations of the enzyme catalytic domain. Biochimica et Biophysica Acta - Molecular Basis of Disease. ISSN 0925-4439. 1864(3), s 660- 667 . doi: 10.1016/j.bbadis.2017.12.016
- Tran, Trung; Bollineni, Ravi Chand; Koehler, Christian & Thiede, Bernd (2018). Absolute two-point quantification of proteins using dimethylated proteotypic peptides. The Analyst. ISSN 0003-2654. 143(18), s 4359- 4365 . doi: 10.1039/c8an01081a
- Koehler, Christian; Bollineni, Ravi Chand & Thiede, Bernd (2017). Application of the half decimal place rule to increase the peptide identification rate. Rapid Communications in Mass Spectrometry. ISSN 0951-4198. 31(2), s 227- 233 . doi: 10.1002/rcm.7780 Fulltekst i vitenarkiv.
- Tran, Trung; Bollineni, Ravi Chand; Strozynski, Margarita Anna; Koehler, Christian & Thiede, Bernd (2017). Identification of Alternative Splice Variants Using Unique Tryptic Peptide Sequences for Database Searches. Journal of Proteome Research. ISSN 1535-3893. 16(7), s 2571- 2578 . doi: 10.1021/acs.jproteome.7b00126
- Arntzen, Magnus Øverlie; Boddie, Paul; Frick, Rahel; Koehler, Christian & Thiede, Bernd (2015). Consolidation of proteomics data in the Cancer proteomics database. Proteomics. ISSN 1615-9853. 15(22), s 3765- 3771 . doi: 10.1002/pmic.201500144
- Chymkowitch, Pierre; Nguéa P, Aurélie; Aanes, Håvard; Koehler, Christian; Thiede, Bernd; Lorenz, Susanne; Meza, Leonardo Zepeda; Klungland, Arne & Enserink, Jorrit (2015). Sumoylation of Rap1 mediates the recruitment of TFIID to promote transcription of ribosomal protein genes. Genome Research. ISSN 1088-9051. 25(6), s 897- 906 . doi: 10.1101/gr.185793.114
- Koehler, Christian; Arntzen, Magnus Øverlie & Thiede, Bernd (2015). The impact of carbon-13 and deuterium on relative quantification of proteins using stable isotope diethyl labeling. Rapid Communications in Mass Spectrometry. ISSN 0951-4198. 29(9), s 830- 836 . doi: 10.1002/rcm.7170
- Øverbye, Anders; Skotland, Tore; Koehler, Christian; Thiede, Bernd; Seierstad, Therese; Berge, Viktor; Sandvig, Kirsten & Llorente, Alicia (2015). Identification of prostate cancer biomarkers in urinary exosomes. OncoTarget. ISSN 1949-2553. 6(30), s 30357- 30376 . doi: 10.18632/oncotarget.4851
- Koehler, Christian; Arntzen, Magnus; De Souza, Gustavo Antonio & Thiede, Bernd (2013). An Approach for Triplex-Isobaric Peptide Termini Labeling (Triplex-IPTL). Analytical Chemistry. ISSN 0003-2700. 85(4), s 2478- 2485 . doi: 10.1021/ac3035508
- Størvold, Gro Leite; Landskron, Johannes; Strozynski, Margarita Anna; Arntzen, Magnus; Koehler, Christian; Kalland, Maria Elisabeth; Tasken, Kjetil & Thiede, Bernd (2013). Quantitative profiling of tyrosine phosphorylation revealed changes in the activity of the T cell receptor signaling pathway upon cisplatin-induced apoptosis. Journal of Proteomics. ISSN 1874-3919. 91, s 344- 357 . doi: 10.1016/j.jprot.2013.07.019
- Thiede, Bernd; Koehler, Christian; Strozynski, Margarita Anna; Treumann, Achim; Stein, Robert; Zimny-Arndt, Ursula; Schmid, Monika & Jungblut, Peter R. (2013). High Resolution Quantitative Proteomics of HeLa Cells Protein Species Using Stable Isotope Labeling with Amino Acids in Cell Culture(SILAC), Two-Dimensional Gel Electrophoresis(2DE) and Nano-Liquid Chromatograpohy Coupled to an LTQ-OrbitrapMass Spectrometer. Molecular & Cellular Proteomics. ISSN 1535-9476. 12(2), s 529- 538 . doi: 10.1074/mcp.M112.019372
- Koehler, Christian; Arntzen, Magnus; Treumann, Achim & Thiede, Bernd (2012). A Rapid Approach for Isobaric Peptide Termini Labeling. Methods in molecular biology. ISSN 1064-3745. 893, s 129- 141 . doi: 10.1007/978-1-61779-885-6_10
- Koehler, Christian; Arntzen, Magnus; Treumann, Achim & Thiede, Bernd (2012). Comparison of data analysis parameters and MS/MS fragmentation techniques for quantitative proteome analysis using isobaric peptide termini labeling (IPTL). Analytical and Bioanalytical Chemistry. ISSN 1618-2642. 404(4), s 1103- 1114 . doi: 10.1007/s00216-012-5949-z
- Arntzen, Magnus; Koehler, Christian; Barsnes, Harald; Berven, Frode; Treumann, Achim & Thiede, Bernd (2011). IsobariQ: Software for Isobaric Quantitative Proteomics using IPTL, iTRAQ, and TMT. Journal of Proteome Research. ISSN 1535-3893. 10(2), s 913- 920 . doi: 10.1021/pr1009977
- Arntzen, Magnus; Koehler, Christian; Treumann, Achim & Thiede, Bernd (2011). Quantitative proteome analysis using isobaric peptide termini labeling (IPTL). Methods in molecular biology. ISSN 1064-3745. 753, s 65- 76 . doi: 10.1007/978-1-61779-148-2_5
- Koehler, Christian; Arntzen, Magnus; Strozynski, Margarita Anna; Treumann, Achim & Thiede, Bernd (2011). Isobaric Peptide Termini Labeling Utilizing Site-Specific N-Terminal Succinylation. Analytical Chemistry. ISSN 0003-2700. 83(12), s 4775- 4781 . doi: 10.1021/ac200229w
- Kozielski, Frank; Riaz, Tahira; DeBonis, Salvatore; Koehler, Christian; Panse, Isabel; Strozynski, Margarita Anna; Donaldson, Ian Matthew; Thiede, Bernd & Kroening, Mario (2011). Proteome analysis of microtubule-associated proteins and their interacting partners from mammalian brain. Amino Acids. ISSN 0939-4451. 41(2), s 363- 385 . doi: 10.1007/s00726-010-0649-5
- Schmidt, Frank; Dahlmann, Burkhardt; Hustoft, Hanne Kolsrud; Koehler, Christian; Strozynski, Margarita Anna; Kloss, Alexander; Zimny-Arndt, Ursula; Jungblut, Peter R. & Thiede, Bernd (2011). Quantitative proteome analysis of the 20S proteasome of apoptotic Jurkat T cells. Amino Acids. ISSN 0939-4451. 41(2), s 351- 361 . doi: 10.1007/s00726-010-0575-6
- Dørum, Siri; Arntzen, Magnus; Qiao, Shuo Wang; Holm, Anders; Koehler, Christian; Thiede, Bernd; Sollid, Ludvig Magne & Fleckenstein, Burkhard (2010). The Preferred Substrates for Transglutaminase 2 in a Complex Wheat Gluten Digest Are Peptide Fragments Harboring Celiac Disease T-Cell Epitopes. PLOS ONE. ISSN 1932-6203. 5(11) . doi: 10.1371/journal.pone.0014056 Vis sammendrag
- Kozielski, Frank; Riaz, Tahira; DeBonis, Salvatore; Koehler, Christian; Kröning, Mario; Panse, Isabel; Strozynski, Margarita Anna; Donaldson, Ian M & Thiede, Bernd (2010). Proteome analysis of microtubule-associated proteins and their interacting partners from mammalian brain. Amino Acids. ISSN 0939-4451. . doi: 10.1007/s00726-010-0649-5
- De Souza, Gustavo; Fortuin, Suereta; Aguilar, Diana; Pando, Rogelio Hernandez; McEvoy, Christopher R.E.; van Helden, Paul D.; Koehler, Christian J; Thiede, Bernd; Warren, Robin M & Wiker, Harald G (2010). Using a Label-free Proteomics Method to Identify Differentially Abundant Proteins in Closely Related Hypo- and Hypervirulent Clinical Mycobacterium tuberculosis Beijing Isolates. Molecular & Cellular Proteomics. ISSN 1535-9476. 9(11), s 2414- 2423 . doi: 10.1074/mcp.M900422-MCP200 Vis sammendrag
- Saunders, Threrese Solstad; Bjørgo, Elisa; Koehler, Christian; Strozynski, Margarita Anna; Torgersen, Knut Martin; Tasken, Kjetil & Thiede, Bernd (2010). Quantitative proteome analysis of detergent-resistant membranes identifies the differential regulation of protein kinase C isoforms in apoptotic T cells. Proteomics. ISSN 1615-9853. 10(15), s 2758- 2768 . doi: 10.1002/pmic.201000164
- Schmidt, Frank; Dahlmann, Burkhardt; Hustoft, Hanne Kolsrud; Koehler, Christian; Strozynski, Margarita Anna; Klof, Alexander; Zimmy-Arndt, Ursula; Jungblut, Peter R. & Thiede, Bernd (2010). Quantitative proteome analysis of the 20S proteasome of apoptotic Jurkat T cells. Amino Acids. ISSN 0939-4451. . doi: 10.1007/s00726-010-0575-6
- Tomazella, Gisele Guiqardi; daSilva, Idalete; Thomé, Carolina H.; Greene, Lewis J; Koehler, Christian J; Thiede, Bernd; Wiker, Harald G & De Souza, Gustavo (2010). Analysis of detergent-insoluble and whole cell lysate fractions of resting neutrophils using high-resolution mass spectrometry. Journal of Proteome Research. ISSN 1535-3893. 9(4), s 2030- 2036 . doi: 10.1021/pr1000253 Vis sammendrag
- de Souza, GA; De Souza, Gustavo; Søfteland, Tina; Softeland, T; Koehler, Christian J; Thiede, Bernd & Wiker, Harald G (2009). Validating divergent ORF annotation of the Mycobacterium leprae genome through a full translation dataset and peptide identification by tandem mass spectrometry. Proteomics. ISSN 1615-9853. 9(12), s 3233- 3243 . doi: 10.1002/pmic.200800955 Vis sammendrag
- Koehler, Christian; Strozynski, Margarita Anna; Kozielski, F; Treumann, A & Thiede, Bernd (2009). Isobaric Peptide Termini Labeling for MS/MS-Based Quantitative Proteomics. Journal of Proteome Research. ISSN 1535-3893. 8(9), s 4333- 4341 . doi: 10.1021/pr900425n
- Bollineni, Ravi Chand; Koehler, Christian; Gislefoss, Randi Elin; Anonsen, Jan Haug & Thiede, Bernd (2018). Author Correction: Large-scale intact glycopeptide identification by Mascot database search. Scientific Reports. ISSN 2045-2322. 8 . doi: 10.1038/s41598-018-28147-w
- Thiede, Bernd; Koehler, Christian; Strozynski, Margarita Anna; Treumann, A; Stein, Robert; Zimny-Amdt, Ursula; Schmid, Monika & Jungblut, Peter R. (2012). Protein species high resolution quantitative proteomics of HeLa cells using SILAC-2-DE-nanoLC/LTQ-Orbitrap mass spectrometry. Molecular & Cellular Proteomics. ISSN 1535-9476. . doi: 10.1074/mcp.M112.019372
- Arntzen, Magnus; Koehler, Christian; Barsnes, Harald; Berven, Frode; Treumann, Achim & Thiede, Bernd (2011). IsobariQ: Software for isobaric quantitative proteomics using IPTL, iTRAQ and TMT.
- De Souza, Gustavo; Fortuin, Suereta; McEvoy, Christopher R; Pando, Rogelio Hernandez; Koehler, Christian J; Thiede, Bernd; Warren, Robin M & Wiker, Harald G (2009). A label-free method identified differentially abundant proteins in related M.tuberculosis Beijing strains.
Publisert 1. mars 2016 09:50
- Sist endret 1. mars 2016 14:50