Thomas F Hansen

• Hansen, Thomas F; Solvin, Thomas Mørtvedt & Pavlicev, Mihaela (2019). Predicting evolutionary potential: A numerical test of evolvability measures. Evolution.  ISSN 0014-3820.  73(4), s 689- 703 . doi: 10.1111/evo.13705 Vis sammendrag

  Despite sophisticated mathematical models, the theory of microevolution is mostly treated as a qualitative rather than a quantitative tool. Numerical measures of selection, constraints, and evolutionary potential are often too loosely connected to theory to provide operational predictions of the response to selection. In this paper, we study the ability of a set of operational measures of evolvability and constraint to predict short‐term selection responses generated by individual‐based simulations. We focus on the effects of selective constraints under which the response in one trait is impeded by stabilizing selection on other traits. The conditional evolvability is a measure of evolutionary potential explicitly developed for this situation. We show that the conditional evolvability successfully predicts rates of evolution in an equilibrium situation, and further that these equilibria are reached with characteristic times that are inversely proportional to the fitness load generated by the constraining characters. Overall, we find that evolvabilities and conditional evolvabilities bracket responses to selection, and that they together can be used to quantify evolutionary potential on time scales where the G‐matrix remains relatively constant.

• Toljagic, Olja; Voje, Kjetil L.; Matschiner, Michael; Liow, Lee Hsiang & Hansen, Thomas F (2018). Millions of Years Behind: Slow Adaptation of Ruminants to Grasslands. Systematic Biology.  ISSN 1063-5157.  67(1), s 145- 157 . doi: 10.1093/sysbio/syx059
• Armbruster, W. Scott; Bolstad, Geir Hysing; Hansen, Thomas F; Keller, Barbara; Conti, Elena & Pelabon, Christophe (2017). The measure and mismeasure of reciprocity in heterostylous flowers. New Phytologist.  ISSN 0028-646X.  215, s 906- 917 . doi: 10.1111/nph.14604 Fulltekst i vitenarkiv. Vis sammendrag

  The goal of biological measurement is to capture underlying biological phenomena in numerical form. The reciprocity index applied to heterostylous flowers is meant to measure the degree of correspondence between fertile parts of opposite sex on complementary (inter-compatible) morphs, reflecting the correspondence of locations of pollen placement on, and stigma contact with, pollinators. Pollen of typical heterostylous flowers can achieve unimpeded fertilization only on opposite-morph flowers. Thus, the implicit goal of this measurement is to assess the likelihood of ‘legitimate’ pollinations between compatible morphs, and hence reproductive fitness. Previous reciprocity metrics fall short of this goal on both empirical and theoretical grounds. We propose a new measure of reciprocity based on theory that relates floral morphology to reproductive fitness. This method establishes a scale based on adaptive inaccuracy, a measure of the fitness cost of the deviation of phenotypes in a population from the optimal phenotype. Inaccuracy allows the estimation of independent contributions of maladaptive bias (mean departure from optimum) and imprecision (within-population variance) to the phenotypic mismatch (inaccuracy) of heterostylous morphs on a common scale. We illustrate this measure using data from three species of Primula (Primulaceae). adaptive accuracy, floral dimorphisms, heterostyly, maladaptation, measurement theory, phenotypic load, pollination, Primula.

• Falahati-Anbaran, Mohsen; Stenøien, Hans K.; Bolstad, Geir Hysing; Hansen, Thomas F; Pérez‐Barrales, Rocio; Armbruster, William Scott & Pelabon, Christophe (2017). Novel microsatellite markers for Dalechampia scandens (Euphorbiaceae) and closely related taxa: application to studying a species complex. Plant Species Biology.  ISSN 0913-557X.  32(2), s 179- 186 . doi: 10.1111/1442-1984.12142 Fulltekst i vitenarkiv.
• Hansen, Thomas F (2017). On the definition and measurement of fitness in finite populations. Journal of Theoretical Biology.  ISSN 0022-5193.  419, s 36- 43 . doi: 10.1016/j.jtbi.2016.12.024
• Houle, David; Bolstad, Geir Hysing; van der Linde, Kim & Hansen, Thomas F (2017). Mutation predicts 40 million years of fly wing evolution. Nature.  ISSN 0028-0836.  548(7668), s 447- 450 . doi: 10.1038/nature23473 Fulltekst i vitenarkiv. Vis sammendrag

  Mutation enables evolution, but the idea that adaptation is also shaped by mutational variation is controversial1–4. Simple evolutionary hypotheses predict such a relationship if the supply of mutations constrains evolution5,6, but it is not clear that constraints exist, and, even if they do, they may be overcome by long-term natural selection. Quantification of the relationship between mutation and phenotypic divergence among species will help to resolve these issues. Here we use precise data on over 50,000 Drosophilid fly wings to demonstrate unexpectedly strong positive relationships between variation produced by mutation, standing genetic variation, and the rate of evolution over the last 40 million years. Our results are inconsistent with simple constraint hypotheses because the rate of evolution is very low relative to what both mutational and standing variation could allow. In principle, the constraint hypothesis could be rescued if the vast majority of mutations are so deleterious that they cannot contribute to evolution, but this also requires the implausible assumption that deleterious mutations have the same pattern of effects as potentially advantageous ones. Our evidence for a strong relationship between mutation and divergence in a slowly evolving structure challenges the existing models of mutation in evolution.

• Mayer, Christine & Hansen, Thomas F (2017). Evolvability and Robustness: A paradox restored. Journal of Theoretical Biology.  ISSN 0022-5193.  430, s 78- 85 . doi: 10.1016/j.jtbi.2017.07.004
• Opedal, Øystein Hjorthol; Bolstad, Geir Hysing; Hansen, Thomas F; Armbruster, William Scott & Pelabon, Christophe (2017). The evolvability of herkogamy: Quantifying the evolutionary potential of a composite trait. Evolution.  ISSN 0014-3820.  71(6), s 1572- 1586 . doi: 10.1111/evo.13258
• Grabowski, Mark Walter; Voje, Kjetil L. & Hansen, Thomas F (2016). Evolutionary modeling and correcting for observation error support a 3/5 brain-body allometry for primates. Journal of Human Evolution.  ISSN 0047-2484.  94, s 106- 116 . doi: 10.1016/j.jhevol.2016.03.001
• Hansen, Thomas F (2016). On bias and precision in metaanalysis: the error in the error. Journal of Evolutionary Biology.  ISSN 1010-061X.  29, s 1919- 1921 . doi: 10.1111/jeb.12947
• Malmstrøm, Martin; Matschiner, Michael; Tørresen, Ole Kristian; Star, Bastiaan; Snipen, Lars-Gustav; Hansen, Thomas F; Baalsrud, Helle Tessand; Nederbragt, Alexander Johan; Hanel, Reinhold; Salzburger, Walter; Stenseth, Nils Christian; Jakobsen, Kjetill Sigurd & Jentoft, Sissel (2016). Evolution of the immune system influences speciation rates in teleost fishes. Nature Genetics.  ISSN 1061-4036.  48(10), s 1204- 1210 . doi: 10.1038/ng.3645 Fulltekst i vitenarkiv.
• Bolstad, Geir Hysing; Cassara, Jason A.; Marquez, Eladio; Hansen, Thomas F; van der Linde, Kim; Houle, David & Pelabon, Christophe (2015). Complex constraints on allometry revealed by artificial selection on the wing of Drosophila melanogaster. Proceedings of the National Academy of Sciences of the United States of America.  ISSN 0027-8424.  112(43), s 13284- 13289 . doi: 10.1073/pnas.1505357112 Fulltekst i vitenarkiv. Vis sammendrag

  Precise exponential scaling with size is a fundamental aspect of phenotypic variation. These allometric power laws are often invariant across taxa and have long been hypothesized to reflect developmental constraints. Here we test this hypothesis by investigating the evolutionary potential of an allometric scaling relationship in drosophilid wing shape that is nearly invariant across 111 species separated by at least 50 million years of evolution. In only 26 generations of artificial selection in a population of Drosophila melanogaster, we were able to drive the allometric slope to the outer range of those found among the 111 sampled species. This response was rapidly lost when selection was suspended. Only a small proportion of this reversal could be explained by breakup of linkage disequilibrium, and direct selection on wing shape is also unlikely to explain the reversal, because the more divergent wing shapes produced by selection on the allometric intercept did not revert. We hypothesize that the reversal was instead caused by internal selection arising from pleiotropic links to unknown traits. Our results also suggest that the observed selection response in the allometric slope was due to a component expressed late in larval development and that variation in earlier development did not respond to selection. Together, these results are consistent with a role for pleiotropic constraints in explaining the remarkable evolutionary stability of allometric scaling. allometry | artificial selection | comparative analyses | developmental constraints | pleiotropy

• Hansen, Thomas F (2015). Evolutionary Constraints, In Jonathan Losos (ed.),  Oxford Bibliographies in Evolutionary Biology.  Oxford University Press.  ISBN 9780199941728.  Evolutionary Constraints.  s 1 - 28
• Hansen, Thomas F (2015). Measuring gene interactions. Methods in molecular biology.  ISSN 1064-3745.  1253, s 115- 143 . doi: 10.1007/978-1-4939-2155-3_7
• Le Rouzic, Arnaud; Hansen, Thomas F; Gosden, Thomas P. & Svensson, Erik I. (2015). Evolutionary time-series analysis reveals the signature of frequency-dependent selection on a female mating polymorphism. American Naturalist.  ISSN 0003-0147.  185(6), s E182- E196 . doi: 10.1086/680982 Fulltekst i vitenarkiv.
• Tarka, Maja; Bolstad, Geir Hysing; Wacker, Sebastian; Räsänen, Katja; Hansen, Thomas F & Pelabon, Christophe (2015). Did natural selection make the Dutch taller? A cautionary note on the importance of quantification in understanding evolution.. Evolution.  ISSN 0014-3820.  69(12), s 3204- 3206 . doi: 10.1111/evo.12803
• Armbruster, William Scott; Pelabon, Christophe; Bolstad, Geir Hysing & Hansen, Thomas F (2014). Integrated phenotypes: Understanding trait covariation in plants and animals. Philosophical Transactions of the Royal Society of London. Biological Sciences.  ISSN 0962-8436.  369(1649) . doi: 10.1098/rstb.2013.0245
• Bolstad, Geir Hysing; Hansen, Thomas F; Pelabon, Christophe; Falahati-Anbaran, Mohsen; Perez-Barrales, Rocio & Armbruster, William Scott (2014). Genetic constraints predict evolutionary divergence in Dalechampia blossoms. Philosophical Transactions of the Royal Society of London. Biological Sciences.  ISSN 0962-8436.  369(1649) . doi: 10.1098/rstb.2013.0255
• Firmat, Cyril Joel Patrick; Lozano-Fernandez, I; Agusti, J; Bolstad, Geir Hysing; Cuenca-Bescos, G; Hansen, Thomas F & Pelabon, Christophe (2014). Walk the line: 600 000 years of molar evolution constrained by allometry in the fossil rodent Mimomys savini. Philosophical Transactions of the Royal Society of London. Biological Sciences.  ISSN 0962-8436.  369(1649) . doi: 10.1098/rstb.2014.0057
• Hansen, Thomas F (2014). Use and Misuse of Comparative Methods in the Study of Adaptation, In Garamszegi László Zsolt (ed.),  Modern Phylogenetic Comparative Methods and Their Application in Evolutionary Biology.  Springer.  ISBN 978-3-662-43550-2.  Chapter 14.  s 351 - 379
• Pelabon, Christophe; Firmat, Cyril Joel Patrick; Bolstad, Geir Hysing; Voje, Kjetil L.; Houle, David; Cassara, Jason; Le Rouzic, Arnaud & Hansen, Thomas F (2014). Evolution of morphological allometry. Annals of the New York Academy of Sciences.  ISSN 0077-8923.  1320(1), s 58- 75 . doi: 10.1111/nyas.12470 Fulltekst i vitenarkiv.
• Voje, Kjetil L.; Hansen, Thomas F; Egset, Camilla Kalvatn; Bolstad, Geir Hysing & Pelabon, Christophe (2014). Allometric constraints and the evolution of allometry. Evolution.  ISSN 0014-3820.  68(3), s 866- 885 . doi: 10.1111/evo.12312
• Falahati-Anbaran, Mohsen; Stenøien, Hans K.; Pelabon, Christophe; Bolstad, Geir Hysing; Perez-Barrales, Rocio; Hansen, Thomas F & Armbruster, William Scott (2013). Development of microsatellite markers for the neotropical vine Dalechampia scandens (Euphorbiaceae). American Journal of Botany.  ISSN 0002-9122.  1(6) . doi: 10.3732/apps.1200492
• Hansen, Thomas F (2013). Why epistasis is important for selection and adaptation. Evolution.  ISSN 0014-3820.  67(12), s 3501- 3511 . doi: 10.1111/evo.12214
• Le Rouzic, Arnaud; Alvarez-Castro, Jose M. & Hansen, Thomas F (2013). The Evolution of Canalization and Evolvability in Stable and Fluctuating Environments. Evolutionary biology.  ISSN 0071-3260.  40(3), s 317- 340 . doi: 10.1007/s11692-012-9218-z
• Perez-Barrales, Rocio; Bolstad, Geir Hysing; Pelabon, Christophe; Hansen, Thomas F & Armbruster, William Scott (2013). Pollinators and seed predators generate conflicting selection on Dalechampia blossoms. Oikos.  ISSN 0030-1299.  122(10), s 1411- 1428 . doi: 10.1111/j.1600-0706.2013.20780.x
• Voje, Kjetil Lysne & Hansen, Thomas F (2013). Evolution of static allometries: adaptive change in allometric slopes of eye span in stalk-eyed flies. Evolution.  ISSN 0014-3820.  67(2), s 453- 467 . doi: 10.1111/j.1558-5646.2012.01777.x
• Voje, Kjetil Lysne; Mazzarella, Anna Virginia Black; Hansen, Thomas F; Østbye, Kjartan; Klepaker, Tom Olav; Bass, Arthur; Herland, Anders; Bærum, Kim Magnus; Gregersen, Finn & Vøllestad, Leif Asbjørn (2013). Adaptation and constraint in a stickleback radiation. Journal of Evolutionary Biology.  ISSN 1010-061X.  26(11), s 2396- 2414 . doi: 10.1111/jeb.12240
• Armbruster, W. Scott; Hansen, Thomas F; Bolstad, Geir Hysing; Perez-Barrales, Rocio & Pelabon, Christophe (2012). Adaptive accuracy and adaptive landscapes, In Erik I. Svensson & Ryan Calsbeek (ed.),  The adaptive landscape in evolutionary biology.  Oxford University Press.  ISBN 978-0-19-959537-2.  Chapter 10.  s 150 - 168
• Bartoszek, Krzystof; Pienaar, Jason; Mostad, Petter; Andersson, Staffan & Hansen, Thomas F (2012). A phylogenetic comparative method for studying multivariate adaptation. Journal of Theoretical Biology.  ISSN 0022-5193.  314, s 204- 215 . doi: 10.1016/j.jtbi.2012.08.005
• Egset, Camilla Kalvatn; Hansen, Thomas F; Le Rouzic, Arnaud; Bolstad, Geir Hysing; Rosenqvist, Gunilla & Pelabon, Christophe (2012). Artificial selection on allometry: change in elevation but not slope. Journal of Evolutionary Biology.  ISSN 1010-061X.  25(5), s 938- 948 . doi: 10.1111/j.1420-9101.2012.02487.x Fulltekst i vitenarkiv.
• Escudero, Marcial; Hipp, Andrew L.; Hansen, Thomas F; Voje, Kjetil Lysne & Luceño, Modesto (2012). Selection and inertia in the evolution of holocentric chromosomes in sedges (Carex, Cyperaceae). New Phytologist.  ISSN 0028-646X.  195(1), s 237- 247 . doi: 10.1111/j.1469-8137.2012.04137.x
• Hansen, Thomas F (2012). Adaptive Landscapes and Macroevolutionary Dynamics, In Erik I. Svensson & Ryan Calsbeek (ed.),  The adaptive landscape in evolutionary biology.  Oxford University Press.  ISBN 978-0-19-959537-2.  Chapter 13.  s 205 - 226
• Hansen, Thomas F & Bartoszek, Krzysztof (2012). Interpreting the Evolutionary Regression: The Interplay Between Observational and Biological Errors in Phylogenetic Comparative Studies. Systematic Biology.  ISSN 1063-5157.  61(3), s 413- 425 . doi: 10.1093/sysbio/syr122
• Pelabon, Christophe; Thöne, Patrick; Hansen, Thomas F & Armbruster, William Scott (2012). Signal honesty and cost of pollinator rewards in Dalechampia scandens (Euphorbiaceae). Annals of Botany.  ISSN 0305-7364.  109(7), s 1331- 1339 . doi: 10.1093/aob/mcs091
• Hansen, Thomas F (2011). Epigenetics: Adaptation or Contingency?, In  Epigenetics: Linking genotype and phenotype in development and evolution.  University of California Press.  ISBN 9780520267091.  Chp 20.  s 357 - 376
• Hansen, Thomas F & Voje, Kjetil Lysne (2011). DEVIATION FROM THE LINE OF LEAST RESISTANCE DOES NOT EXCLUDE GENETIC CONSTRAINTS: A COMMENT ON BERNER ET AL. (2010). Evolution.  ISSN 0014-3820.  65(6), s 1821- 1822 . doi: 10.1111/j.1558-5646.2011.01281.x
• Houle, David; Pelabon, Christophe; Wagner, Günter P. & Hansen, Thomas F (2011). Measurement and meaning in biology. The Quarterly review of biology.  ISSN 0033-5770.  86(1), s 3- 34 . doi: 10.1086/658408
• Le Rouzic, Arnaud; Houle, David & Hansen, Thomas F (2011). A modelling framework for the analysis of artificial-selection time series. Genetics Research.  ISSN 0016-6723.  93(2), s 155- 173
• Le Rouzic, Arnaud; Østbye, Kjartan; Klepaker, Tom Olav; Hansen, Thomas F; Bernatchez, Louis; Schluter, Dolph & Vøllestad, Leif Asbjørn (2011). Strong and consistent natural selection associated with armour reduction in sticklebacks. Molecular Ecology.  ISSN 0962-1083.  20, s 2483- 2493 . doi: 10.1111/j.1365-294X.2011.05071.x
• Pavlicev, Mihaela & Hansen, Thomas F (2011). Genotype-Phenotype Maps Maximizing Evolvability: Modularity Revisited. Evolutionary biology.  ISSN 0071-3260.  38(4), s 371- 389 . doi: 10.1007/s11692-011-9136-5
• Pelabon, Christophe; Armbruster, William Scott & Hansen, Thomas F (2011). Experimental evidence for the Berg hypothesis: vegetative traits are more sensitive than pollination traits to environmental variation. Functional Ecology.  ISSN 0269-8463.  25(1), s 247- 257 . doi: 10.1111/j.1365-2435.2010.01770.x
• Uyeda, Josef; Hansen, Thomas F; Arnold, Stevan J & Pienaar, Jason (2011). The million-year wait for macroevolutionary bursts. Proceedings of the National Academy of Sciences of the United States of America.  ISSN 0027-8424.  108(38), s 15908- 15913 . doi: 10.1073/pnas.1014503108
• Labra, Antonieta; Voje, Kjetil Lysne; Seligmann, Hervé & Hansen, Thomas F (2010). Evolution of the third eye: a phylogenetic comparative study of parietal-eye size as an ecophysiological adaptation in Liolaemus lizards. Biological Journal of the Linnean Society.  ISSN 0024-4066.  101(4), s 870- 883 . doi: 10.1111/j.1095-8312.2010.01541.x
• Bolstad, Geir H; Armbruster, W. Scott; Pelabon, Christophe; Pérez-Barrales, R & Hansen, Thomas F (2010). Direct selection at the blossom level on floral reward by pollinators in a natural population of Dalechampia schottii: full-disclosure honesty?. New Phytologist.  ISSN 0028-646X.  188(2), s 370- 384 . doi: 10.1111/j.1469-8137.2010.03429.x Vis sammendrag

  • Both floral rewards and advertisements can be important in the attraction of pollinators, but few studies have separated the individual contributions of rewards and advertisements to fitness. • Here, we investigated selection by pollinators on individual blossoms in Dalechampia schottii. This Neotropical vine, endemic to the Yucata´n Peninsula, rewards bees by secreting fully visible, deep-blue resin from a gland subtended by two conspicuous petaloid bracts that may play the role of advertisement. • We used contextual analysis to build a fitness function for four morphological traits of individual blossoms: the amount of the reward as measured by gland area; the size of the advertisement trait as measured by bract length; the flower-pollinator fit as measured by the shortest distance between reward and stigma; and the potential for self-pollination as measured by the shortest distance between anthers and stigma. • Larger gland area and increased potential for self-pollination directly increased the seed production of individual blossoms. However, bract size or flower-pollinator fit did not influence the number of seeds produced by blossoms. Therefore, in this Dalechampia species, pollinators seem to select directly on the reward of individual blossoms but not on the advertising bracts.

• Fierst, Janna & Hansen, Thomas F (2010). Genetic architecture and postzygotic reproductive isolation: Evolution of Bateson-Dobzhansky-Muller incompatibilities in a polygenic Model. Evolution.  ISSN 0014-3820.  64(3), s 675- 693 . doi: 10.1111/j.1558-5646.2009.00861.x
• Le Rouzic, Arnaud; Skaug, Hans Julius & Hansen, Thomas F. (2010). Estimating genetic architectures from artificial-selection responses: A random-effect framework. Theoretical Population Biology.  ISSN 0040-5809.  77(2), s 119- 130 . doi: 10.1016/j.tpb.2009.12.003
• Pavlicev, Mihaela; Le Rouzic, Arnaud; Cheverud, James; Günter P., Wagner & Hansen, Thomas F (2010). Directionality of Epistasis in a Murine Intercross Population. Genetics.  ISSN 0016-6731.  185(4), s 1489- 1505 . doi: 10.1534/genetics.110.118356
• Pelabon, Christophe; Hansen, TF; Carter, Ashley J.R. & Houle, David (2010). EVOLUTION OF VARIATION AND VARIABILITY UNDER FLUCTUATING, STABILIZING, AND DISRUPTIVE SELECTION. Evolution.  ISSN 0014-3820.  64(7), s 1912- 1925 . doi: 10.1111/j.1558-5646.2010.00979.x
• Labra, Antonieta; Pienaar, Jason & Hansen, Thomas F (2009). Evolution of Thermal Physiology in Liolaemus Lizards: Adaptation, Phylogenetic Inertia, and Niche Tracking. American Naturalist.  ISSN 0003-0147.  174(2), s 204- 220 . doi: 10.1086/600088
• Armbruster, William Scott; Hansen, TF; Pelabon, Christophe; Pérez-Barrales, R; Perez-Barrales, R & Maad, Johanne (2009). The adaptive accuracy of flowers: measurement and microevolutionary patterns. Annals of Botany.  ISSN 0305-7364.  103(9), s 1529- 1545 . doi: 10.1093/aob/mcp095
• Armbruster, William Scott; Pelabon, Christophe; Hansen, Thomas & Bolstad, Geir Hysing (2009). Macroevolutionary patterns of pollination accuracy: a comparison of three genera. New Phytologist.  ISSN 0028-646X.  183(3), s 600- 617 . doi: 10.1111/j.1469-8137.2009.02930.x
• Hansen, Thomas F & Houle, David (2009). Corrigendum. Journal of Evolutionary Biology.  ISSN 1010-061X.  22(4), s 913- 915 . doi: 10.1111/j.1420-9101.2009.01715.x
• Hansen, Thomas F & Houle, D (2008). Measuring and comparing evolvability and constraint in multivariate characters. Journal of Evolutionary Biology.  ISSN 1010-061X.  21, s 1201- 1219 . doi: 10.1111/j.1420-9101.2008.01573.x
• Pelabon, Christophe; Pélabon, Christophe & Hansen, Thomas (2008). On the adaptive accuracy of directional asymmetry in insect wing size. Evolution.  ISSN 0014-3820.  62(11), s 2855- 2867 . doi: 10.1111/j.1558-5646.2008.00495.x
• Hansen, Thomas F; Pienaar, J & Orzack, SH (2008). A comparative method for studying adaptation to a randomly evolving environment. Evolution.  ISSN 0014-3820.  62, s 1965- 1977 . doi: 10.1111/j.1558-5646.2008.00412.x
• Hansen, TF; Pelabon, Christophe & Armbruster, William Scott (2007). Comparing variational properties of homologous floral and vegetative characters in Dalechampia scandens: Testing the Berg hypothesis. Evolutionary biology.  ISSN 0071-3260.  34(1-2), s 86- 98 . doi: 10.1007/s11692-007-9006-3
• Hansen, Thomas F; Pélabon, Christophe & Armbruster, W. Scott (2007). Comparing variational properties of homologous floral and vegetative characters in Dalechampia scandens: Testing the Berg hypothesis. Evolutionary biology.  ISSN 0071-3260.  34, s 86- 98
• Hansen, Thomas & Skjeldestad, Finn Egil (2007). Adolescents: Is there an association between knowledge of oral contraceptives and profession of provider?. European journal of contraception & reproductive health care.  ISSN 1362-5187.  12(4), s 303- 308 . doi: 10.1080/13625180701475558
• Tomaiuolo, Maurizio; Hansen, Thomas F & Levitan, Don R. (2007). A theoretical investigation of sympatric evolution of temporal reproductive isolation as illustrated by marine broadcast spawners. Evolution.  ISSN 0014-3820.  61, s 2584- 2595 . doi: 10.1111/j.1558-5646.2007.00218.x
• Hansen, Thomas F (2006). The evolution of genetic architecture. Annual Review of Ecology and Systematics.  ISSN 0066-4162.  37, s 123- 157
• Hansen, Thomas F (2006). The origins of robustness. Evolution.  ISSN 0014-3820.  60, s 418- 420
• Hansen, Thomas F; Alvarez-Castro, Jose M.; Carter, Ashley J. R.; Hermisson, Joachim & Wagner, Günter P. (2006). Evolution of genetic architecture under directional selection. Evolution.  ISSN 0014-3820.  60, s 1523- 1536
• Hansen, Thomas; Carter, Ashley; Pélabon, Christophe & Pelabon, Christophe (2006). On adaptive accuracy and precision in natural populations. American Naturalist.  ISSN 0003-0147.  168(2), s 168- 181
• Pélabon, Christophe; Pelabon, Christophe; Hansen, Thomas; Carlson, Matthew & Armbruster, William Scott (2006). Patterns of asymmetry in the twining vine Dalechampia scandens (Euphorbiaceae): ontogenetic and hierarchical perspectives. New Phytologist.  ISSN 0028-646X.  170, s 65- 74
• Pélabon, Christophe; Pelabon, Christophe; Hansen, Thomas F; Hansen, Thomas; Carter, Ashley & Houle, David (2006). Response of fluctuating and directional asymmetry to selection on wing shape in Drosophila melanogaster. Journal of Evolutionary Biology.  ISSN 1010-061X.  19, s 764- 776 . doi: 10.1111/j.1420-9101.2005.01054.x
• Carter, AJR; Hermisson, J & Hansen, Thomas F (2005). The role of epistatic gene interactions in the response to selection and the evolution of evolvability. Theoretical Population Biology.  ISSN 0040-5809.  68(3), s 179- 196
• Hansen, Thomas F & Orzack, SH (2005). Assessing current adaptation and phylogenetic inertia as explanations of trait evolution: The need for controlled comparisons. Evolution.  ISSN 0014-3820.  59(10), s 2063- 2072
• Pelabon, C; Carlson, ML; Hansen, Thomas F & Armbruster, WS (2005). Effects of crossing distance on offspring fitness and developmental stability in Dalechampia scandens (Euphorbiaceae). American Journal of Botany.  ISSN 0002-9122.  92(5), s 842- 851
• Pelabon, Christophe; Carlson, ML; Hansen, TF & Armbruster, William Scott (2005). Effects of crossing distance on offspring fitness and developmental stability in Dalechampia scandens (Euphorbiaceae). American Journal of Botany.  ISSN 0002-9122.  92(5), s 842- 851
• Armbruster, William Scott; Pelabon, Christophe; Hansen, TF & Mulder, CPH (2004). Floral integration, modularity and accuracy: distinguishing complex adaptations from genetic constraints, In Massimo Pigliucci & KA Preston (ed.),  Phenotypic Integration: Studying the Ecology and Evolution of Complex Phenotypes.  Oxford University Press.  ISBN 0-19-516043-6.  Section I.  s 23 - 49
• Graae, Bente Jessen; Hansen, Thomas & Sunde, Pernille Bødtker (2004). The importance of recruitment limitation in forest plant species colonization: a seed sowing experiment. Flora: Morphologie, Geobotanik, Oekophysiologie.  ISSN 0367-2530.  199, s 263- 270
• Pelabon, Christophe; Carlson, ML; Hansen, TF; Yoccoz, NG & Armbruster, William Scott (2004). Consequences of inter-population crosses on developmental stability and canalization of floral traits in Dalechampia scandens (Euphorbiaceae). Journal of Evolutionary Biology.  ISSN 1010-061X.  17, s 19- 32
• Pelabon, Christophe; Hansen, TF; Carlson, ML & Armbruster, William Scott (2004). Variational and genetic properties of developmental stability in Dalechampia scandens. Evolution.  ISSN 0014-3820.  58, s 504- 514
• Sommer, Frank; Hansen, Thomas; Feuchtmayr, Heidrun; Santer, Barbara; Tokle, Nils Egil & Sommer, Ulrich (2003). Do calanoid copepods suppress appendicularians in the coastal ocean?. Journal of Plankton Research.  ISSN 0142-7873.  25(7), s 869- 871

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• Hansen, Thomas F (2017). A review of "Genes and Evolution. Current topics in developmental Biology, Volume 119, Edited by Virginie Orgogozo". The Quarterly review of biology.  ISSN 0033-5770.  92, s 479- 480
• Mayer, Christine & Hansen, Thomas F (2017). Evovability and Robustness in Models of Pattern Formation.
• Albertsen, Elena; Pelabon, Christophe; Le Rouzic, Arnaud; Firmat, Cyril; Hansen, Thomas F; Bolstad, Geir Hysing & Armbruster, Scott (2016). Can we predict direct and correlated response to selection beyond the first generation?.
• Hansen, Thomas F (2016). Epistasis, In Laura Nuno de la Rosa & Gerd Müller (ed.),  Evolutionary Developmental Biology. A Reference Guide.  Springer Publishing Company.  ISBN 978-3-319-33038-9.  Epistasis.  s 1 - 14
• Hansen, Thomas F (2016). Evolvability, Quantitative Genetics of, In Richard M. Kliman (ed.),  Encyclopedia of Evolutionary Biology.  Elsevier.  ISBN 9780128000496.  Evolvability, Quantitative Genetics of.  s 83 - 89
• Kopperud, Bjørn Tore & Hansen, Thomas F (2016). Artiodactyl brain size evolution.
• Mayer, Christine & Hansen, Thomas F (2016). Resolving the relationship between evolvability and robustness using Boolean Genotype-Phenotype Maps.
• Svendsen, Ida Krogsgaard & Hansen, Thomas F (2016). Effects of climate change on biogeography.
• Hansen, Thomas F (2015). Fitness, In Jonathan Losos (ed.),  Oxford Bibliographies in Evolutionary Biology.  Oxford University Press.  ISBN 9780199941728.  Chapter.
• Hansen, Thomas F (2015). Forståelse og misforståelse av arvelighet gjennom historien, I: Dag Olav Hessen; Thore Lie & Nils Christian Stenseth (red.),  Mendels arv - Genetikkens æra.  Gyldendal Norsk Forlag A/S.  ISBN 978-82-05-45818-5.  Kapittel.  s 45 - 79
• Kopperud, Bjørn Tore & Hansen, Thomas F (2015). The ungulate brain: A comparative analysis.
• Mayer, Christine & Hansen, Thomas F (2015). Genotype-Phenotype Maps: Exploring evolvability and robustness by combining a multilinear framework with Boolean networks.
• Mayer, Christine & Hansen, Thomas F (2015). Genotype-Phenotype maps: Exploring evolvability and robustness by combining a multilinear framework with Boolean networks.
• Mayer, Christine & Hansen, Thomas F (2015). Modeling Genotype-Phenotype Maps by combining a multilinear model with Boolean Networks.
• Tarka, Maja; Pelabon, Christophe; Hansen, Thomas F & Sæther, Bernt-Erik (2015). Intralocus sexual conflict and the evolution of sexual dimorphism.
• Liow, Lee Hsiang & Hansen, Thomas F (2013). The Macroevolution Group: monkeys, horses, moss- and other animals (and plants).
• Labra, Antonieta; Voje, Kjetil Lysne; Seligmann, Hervé & Hansen, Thomas F (2011). Erratum bij_1599 237..238 Evolution of the third eye: a phylogenetic comparative study of parietal-eye size as an ecophysiological adaptation in Liolaemus lizards. Biological Journal of the Linnean Society.  ISSN 0024-4066.  102(1), s 237- 238 . doi: 10.1111/j.1095-8312.2010.01599.x
• Hessen, Dag Olav; Stenseth, Nils Christian & Hansen, Thomas F (2010, 25. mars). Anmeldelser: Menneskets vei. [Internett].  Tidsskrift for Den norske legeforening.
• Pavlicev, Mihaela; Cheverud, James & Hansen, Thomas F (2010). The relationship between pleiotropy and evolvability. Integrative and Comparative Biology.  ISSN 1540-7063.  50, s E135- E135
• Hansen, Thomas F (2009). Etter neodarwinismen: Hovedtrekk i evolusjonsteorien 1959-2009, I: Dag Olav Hessen; Thore Lie & Nils Christian Stenseth (red.),  Darwin - Verden ble aldri den samme.  Gyldendal Litteratur.  ISBN 9-788205-390348.  kapittel 3.  s 83 - 132
• Fierst, Janna & Hansen, Thomas F (2008). The Genetic Architecture of Reproductive Isolation.
• Hansen, Thomas F (2008). Macroevolutionary quantitative genetics? A comment on Polly (2008). Evolutionary biology.  ISSN 0071-3260.  35, s 182- 185 . doi: 10.1007/s11692-008-9027-6

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