• Estensmo, E. L. F., Botnen, S. S., Maurice, S., Martin-Sanchez, P. M., Morgado, L.,  Engh, I. B., Høiland, K., Skrede, I. & Kauserud, H. (2022). The indoor mycobiome of daycare centers is affected by occupancy and climate. Applied and environmental microbiology.
  • Cowan, A., Skrede, I. & Moody, S. C. (2022). Cytochrome P450 complement may contribute to niche adaption in Serpula wood-decay fungi. Journal of fungi. 
  • Lunde, L. F., Birkemoe, T., Kauserud, H., Boddy, L., Jacobsen, R. M., Morgado, L., Sverdrup-Thygeson, A. & Maurice, S. (2022). DNA metabarcoding reveals host-specific communities of arthropods residing in fungal fruit bodies. Proceedings of the Royal Society B.
  • Peris, D., Lu, D. S., Kinneberg, V. B., Methlie, I.-S., Dahl, M. S., James, T. Y., Kauserud, H. & Skrede, I.(2022). Large-scale fungal strain sequencing unravels the molecular diversity in mating loci maintained by long-term balancing selection. PLOS Genetics.
  • Sønstebø, J. H., Trucchi, E., Nordén, J., Skrede, I., Miettinen, O., Haridas, S., Pangilinan, J., Grigoriev, I. V., Martin, F., Kauserud, H. & Maurice, S. (2022). Population genomics of a forest fungus reveals high gene flow and climate adaption sinatures. Molecular Ecology.


  • Andreasen, M., Skrede, I., Jaklitsch, W. M., Voglmayr, H. & Nordén, B. (2021). Multi-locus phylogenetic analysis of lophiostomatoid fungi motivates a broad concept of Lophiostoma and reveals nine new species. Persoonia.
  • Bendixsen, D. P., Peris, D. & Stelkens, R (2021). Patterns of genomic instability in interspecific yeast hybrids with diverse ancestries. Frontiers in Fungal Biology. doi: 10.3389/ffunb.2021.742894. 
  • Danielsen, J. S., Morgado, L., Mundra, S., Nybakken, L., Davey, M., Kauserud, H. (2021). Establishment of spruce plantations in native birch forests reduces soil fungal diversity. FEMS Microbiology Ecology.
  • Estensmo, E. L. F., Maurice, S., Morgado, L., Martin-Sanchez, P. M., Skrede, I., Kauserud, H. (2021). The influence of intraspecific sequence variation during DNA metabarcoding: A case study of eleven fungal species. Molecular Ecology Resources.
  • Estensmo, E. L. F., Botnen, S. S., Maurice, S., Martin-Sanchez, P. M., Morgado, L., Engh, I. B., Høiland, K., Skrede, I., Kauserud, H. The indoor mycobiome of daycare centers is affected by occupancy and climate. BioRxiv. DOI:
  • Estensmo, E. L. F., Morgado, L., Maurice, S., Martin-Sanchez, P. M., Engh, I. B., Mattsson, J., Kauserud, H., Skrede, I. (2021). Spatiotemporal variation of the indoor mycobiome in daycare centers. Microbiome. DOI:
  • Hage, H., Miyauchi, S., Virágh, M., Drula, E., Min, B., Chaduli, D., ...Maurice, S. ... & Rosso, M. N. (2021). Gene family expansions and transcriptome signatures uncover fungal adaptations to wood decay. Environmental microbiology. DOI: 10.1111/1462-2920.15423.
  • Martin-Sanchez, P. M., Estensmo, E.-L. F., Morgado, L. N., Maurice, S., Engh, I. B., Skrede, I., Kauserud, H. (2021). Analyzing indoor mycobiomes through a large-scale citizen science study in Norway. Molecular Ecology.
  • Maurice, S., Arnault, G., Norden, J., Botnen, S. S., Miettinen, O., & Kauserud, H. (2021). Fungal sporocarps house diverse and host-specific communities of fungicolous fungi. Isme Journal.
  • Peris, D., Lu, D. S., Kinneberg, V. B., Methlie, I.-S., Dahl, M. S., James, T. Y., Kauserud, H. & Skrede, I. (2021). Long-term balancing selection in highly dynamic mating loci generates trans-species polymorphisms in fungi. bioRxiv.
  • Skrede, I. (2021). Chapter One - Diversity and distribution of ligniolytic fungi. Advances in Botanical Research, Academic Press.
  • Skrede, I., Murat, C., Hess, J., Maurice, S., Sønstebø, J. H., Kohler, A., Dominique, B.-E., Eastwood, D., Högberg, N., Martin, F. & Kauserud, H. (2021). Contrasting demographic histories revealed in two invasive populations of the dry rot fungus Serpula lacrymans. Molecular Ecology.
  • Tonjer, L. R., Thoen, E., Morgado, L., Botnen, S., Mundra, S., Nybakken, L., ... & Kauserud, H. (2021). Fungal community dynamics across a forest-alpine ecotone. Molecular Ecology.


  • Botnen, S., Mundra, S., Kauserud, H., & Eidesen, P. B. (2020). Glacier retreat in the high arctic: Opportunity or threat for ectomycorrhizal diversity? FEMS Microbiology Ecology, 96(12).
  • Botnen, S., Thoen, E., Eidesen, P. B., Krabberod, A. K., & Kauserud, H. (2020). Community composition of arctic root-associated fungi mirrors host plant phylogeny. FEMS Microbiology Ecology, 96(11).
  • Diez, J., Kauserud, H., Andrew, C., Heegaard, E., Krisai-Greilhuber, I., Senn-Irlet, B., . . . Buntgen, U. (2020). Altitudinal upwards shifts in fungal fruiting in the alps. Proceedings of the Royal Society B-Biological Sciences, 287(1919).
  • Estensmo, E. L., Maurice, S., Morgado, L., Martin-Sanchez, P., Skrede, I., & Kauserud, H. (2020). The influence of intraspecific sequence variation during DNA metabarcoding: A case study of eleven fungal species. Authorea. 10.22541/au.160071155.58915559
  • Hess, J., Balasundaram, S. V., Bakkemo, R. I., Drula, E., Henrissat, B., Hogberg, N., . . . Skrede, I. (2020). Niche differentiation and evolution of the wood decay machinery in the invasive fungus Serpula lacrymans. ISME Journal. 10.1038/s41396-020-00799-5
  • Jenssen, A. L., Kauserud, H., & Maurice, S. (2020). High phenotypic variability in the wood decay fungus Phellopilus nigrolimitatus. Fungal Ecology.
  • Løken, S. B., Skrede, I., & Schumacher, T. (2020). The Helvella corium species aggregate in the nordic countries - phylogeny and species delimitation. FUSE - Fungal Systematics and Evolution, 5, 169-186. 
  • Martin-Sanchez, P. M., Estensmo, E. L. F., Morgado, L. N., Maurice, S., Engh, I. B., Skrede, I., & Kauserud, H. (2020). Analyzing indoor mycobiomes through a large-scale citizen scince study of houses from norway. Research Square. doi:10.21203/
  • Nordén, J., Abrego, N., Boddy, L., Bässler, C., Dahlberg, A., Halme, P., Hällfors, M., Maurice, S., Menkis, A., Miettinen, O. and Mäkipää, R. (2020). Ten principles for conservation translocations of threatened wood-inhabiting fungi. Fungal ecology.
  • Schumacher, T. (2020). The pezizomycetes of Grimsdalen, Dovre, South Norway. AGARICA, 41, 1-71. 
  • Seierstad, K., Fossdal, R., Miettinen, O., Carlsen, T., Skrede, I., & Kauserud, H. (2020). Contrasting genetic structuring in the closely related basidiomycetes Trichaptum abietinum and T. Fuscoviolaceum (Hymenochaetales). Fungal Biology. doi:
  • Skrede, I., Ballester, G. L., Mathiesen, C., & Schumacher, T. (2020). The genera Helvella and Dissingia (Ascomycota: Pezizomycetes) in Europe - notes on species from Spain. FUSE - Fungal Systematics and Evolution, 6, 65-93. 
  • Thoen, E., Harder, C. B., Kauserud, H., Botnen, S. S., Vik, U., Taylor, A. F. S., . . . Skrede, I. (2020). In vitro evidence of root colonization suggests ecological versatility in the genus Mycena. New Phytologist, 227(2), 601-612. doi:10.1111/nph.16545


  • Andrew, C., Buntgen, U., Egli, S., Senn-Irlet, B., Grytnes, J. A., Heilmann-Clausen, J., . . . Kauserud, H. (2019). Open-source data reveal how collections-based fungal diversity is sensitive to global change. Applications in Plant Sciences, 7(3). doi:ARTN e122710.1002/aps3.1227
  • Andrew, C., Diez, J., James, T. Y., & Kauserud, H. (2019). Fungarium specimens: A largely untapped source in global change biology and beyond. Philosophical Transactions of the Royal Society B-Biological Sciences, 374(1763). doi:ARTN 2017039210.1098/rstb.2017.0392
  • Asplund, J., Kauserud, H., Ohlson, M., & Nybakken, L. (2019). Spruce and beech as local determinants of forest fungal community structure in litter, humus and mineral soil. FEMS Microbiology Ecology, 95(2). doi:ARTN fiy23210.1093/femsec/fiy232
  • Botnen, S. S., Davey, M. L., Aas, A. B., Carlsen, T., Thoen, E., Heegaard, E., . . . Kauserud, H. (2019). Biogeography of plant root-associated fungal communities in the North Atlantic region mirrors climatic variability. Journal of Biogeography, 46(7), 1532-1546. doi:10.1111/jbi.13613
  • Hansen, K., Schumacher, T., Skrede, I., Huhtinen, S., & Wang, X. H. (2019). Pindara revisited - evolution and generic limits in Helvellaceae. Persoonia, 42, 186-204. doi:10.3767/persoonia.2019.42.07
  • Krah, F. S., Buntgen, U., Schaefer, H., Muller, J., Andrew, C., Boddy, L., . . . Bassler, C. (2019). European mushroom assemblages are darker in cold climates. Nature Communications, 10. doi:ARTN 289010.1038/s41467-019-10767-z.
  • Maurice, S., Montes, M. S., Nielsen, B. J., Bødker, L., Martin, M. D., Jønck, C. G., ... & Rosendahl, S. (2019). Population genomics of an outbreak of the potato late blight pathogen, Phytophthora infestans, reveals both clonality and high genotypic diversity. DOI: 10.1111/mpp.12819. Molecular plant pathology.
  • Skrede, I., Solbakken, M. H., Hess, J., Fossdal, C. G., Hegnar, O., & Alfredsen, G. (2019). Wood modification by furfuryl alcohol resulted in a delayed decomposition response in Rhodonia (postia) placenta. Applied and Environmental Microbiology, 85(14). doi:ARTN e00338-1910.1128/AEM.00338-19
  • Straumfors, A., Foss, O. A. H., Fuss, J., Mollerup, S. K., Kauserud, H., & Mundra, S. (2019). The inhalable mycobiome of sawmill workers: Exposure characterization and diversity. Applied and Environmental Microbiology, 85(21). doi:ARTN e01448-1910.1128/AEM.01448-19
  • Thoen, E., Aas, A. B., Vik, U., Brysting, A. K., Skrede, I., Carlsen, T., & Kauserud, H. (2019). A single ectomycorrhizal plant root system includes a diverse and spatially structured fungal community. Mycorrhiza, 29(3), 167-180. doi:10.1007/s00572-019-00889-z
  • Zinger, L., Bonin, A., Alsos, I. G., Balint, M., Bik, H., Boyer, F., . . . Taberlet, P. (2019). DNA metabarcoding-need for robust experimental designs to draw sound ecological conclusions. Molecular Ecology, 28(8), 1857-1862. doi:10.1111/mec.15060


  • Andrew, C., Heegaard, E., Gange, A. C., Senn-Irlet, B., Egli, S., Kirk, P. M., . . . Boddy, L. (2018). Congruency in fungal phenology patterns across dataset sources and scales. Fungal Ecology, 32, 9-17. doi:10.1016/j.funeco.2017.11.009
  • Andrew, C., Heegaard, E., Hoiland, K., Senn-Irlet, B., Kuyper, T. W., Krisai-Greilhuber, I., . . . Kauserud, H. (2018). Explaining European fungal fruiting phenology with climate variability. Ecology, 99(6), 1306-1315. doi:10.1002/ecy.2237
  • Asplund, J., Kauserud, H., Bokhorst, S., Lie, M. H., Ohlson, M., & Nybakken, L. (2018). Fungal communities influence decomposition rates of plant litter from two dominant tree species. Fungal Ecology, 32, 1-8. doi:10.1016/j.funeco.2017.11.003
  • Balasundaram, S. V., Hess, J., Durling, M. B., Moody, S. C., Thorbek, L., Progida, C., . . . Skrede, I. (2018). The fungus that came in from the cold: Dry rot's pre-adapted ability to invade buildings. ISME Journal, 12(3), 791-801. doi:10.1038/s41396-017-0006-8
  • Bidartondo, M. I., Ellis, C., Kauserud, H., Kennedy, P. G., Lilleskov, E., Suz, L. M., & Andrew, C. (2018). Climate change: Fungal responses and effects. In K. J. Willis (Ed.), State of the world’s fungi 2018 (pp. 62-69). Kew, UK: Royal Botanical Gardens.
  • Botnen, S. S., Davey, M. L., Halvorsen, R., & Kauserud, H. (2018). Sequence clustering threshold has little effect on the recovery of microbial community structure. Molecular Ecology Resources, 18(5), 1064-1076. doi:10.1111/1755-0998.12894
  • Gange, A. C., Heegaard, E., Boddy, L., Andrew, C., Kirk, P., Halvorsen, R., . . . Kauserud, H. (2018). Trait-dependent distributional shifts in fruiting of common British fungi. Ecography, 41(1), 51-61. doi:10.1111/ecog.03233
  • Hess, J., Skrede, I., De Mares, M. C., Hainaut, M., Henrissat, B., & Pringle, A. (2018). Rapid divergence of genome architectures following the origin of an ectomycorrhizal symbiosis in the genus Amanita. Molecular Biology and Evolution, 35(11), 2786-2804. doi:10.1093/molbev/msy179
  • Jacobsen, R. M., Sverdrup-Thygeson, A., Kauserud, H., & Birkemoe, T. (2018). Revealing hidden insect - fungus interactions; moderately specialized, modular and anti-nested detritivore networks. Proceedings of the Royal Society B-Biological Sciences, 285(1876). doi:ARTN 2017283310.1098/rspb.2017.2833
  • Jacobsen, R. M., Sverdrup-Thygeson, A., Kauserud, H., Mundra, S., & Birkemoe, T. (2018). Exclusion of invertebrates influences saprotrophic fungal community and wood decay rate in an experimental field study. Functional Ecology, 32(11), 2571-2582. doi:10.1111/1365-2435.13196
  • Khomich, M., Cox, F., Andrew, C. J., Andersen, T., Kauserud, H., & Davey, M. L. (2018). Coming up short: Identifying substrate and geographic biases in fungal sequence databases. Fungal Ecology, 36, 75-80. doi:10.1016/j.funeco.2018.08.002


  • Andrew, C., Heegaard, E., Kirk, P. M., Bassler, C., Heilmann-Clausen, J., Krisai-Greilhuber, I., . . . Kauserud, H. (2017). Big data integration: Pan-European fungal species observations' assembly for addressing contemporary questions in ecology and global change biology. Fungal Biology Reviews, 31(2), 88-98. doi:10.1016/j.fbr.2017.01.001
  • Cross, H., Sonstebo, J. H., Nagy, N. E., Timmermann, V., Solheim, H., Borja, I., . . . Hietala, A. M. (2017). Fungal diversity and seasonal succession in ash leaves infected by the invasive ascomycete Hymenoscyphus fraxineus. New Phytologist, 213(3), 1405-1417. doi:10.1111/nph.14204
  • Davey, M. L., Skogen, M. J., Heegaard, E., Halvorsen, R., Kauserud, H., & Ohlson, M. (2017). Host and tissue variations overshadow the response of boreal moss-associated fungal communities to increased nitrogen load. Molecular Ecology, 26(2), 571-588. doi:10.1111/mec.13938
  • Dunthorn, M., Kauserud, H., Bass, D., Mayor, J., & Mahe, F. (2017). Yeasts dominate soil fungal communities in three lowland neotropical rainforests. Environmental Microbiology Reports, 9(5), 668-675. doi:10.1111/1758-2229.12575
  • Grube, M., Gaya, E., Kauserud, H., Smith, A. M., Avery, S. V., Fernstad, S. J., . . . Bendiksby, M. (2017). The next generation fungal diversity researcher. Fungal Biology Reviews, 31(3), 124-130. doi:10.1016/j.fbr.2017.02.001
  • Heegaard, E., Boddy, L., Diez, J. M., Halvorsen, R., Kauserud, H., Kuyper, T. W., . . . Egli, S. (2017). Fine-scale spatiotemporal dynamics of fungal fruiting: Prevalence, amplitude, range and continuity. Ecography, 40(8), 947-959. doi:10.1111/ecog.02256
  • Jacobsen, R. M., Kauserud, H., Sverdrup-Thygeson, A., Bjorbwkmo, M. M., & Birkemoe, T. (2017). Wood-inhabiting insects can function as targeted vectors for decomposer fungi. Fungal Ecology, 29, 76-84. doi:10.1016/j.funeco.2017.06.006
  • Khomich, M., Davey, M. L., Kauserud, H., Rasconi, S., & Andersen, T. (2017). Fungal communities in Scandinavian lakes along a longitudinal gradient. Fungal Ecology, 27, 36-46. doi:10.1016/j.funeco.2017.01.008
  • Khomich, M., Kauserud, H., Logares, R., Rasconi, S., & Andersen, T. (2017). Planktonic protistan communities in lakes along a large-scale environmental gradient. FEMS Microbiology Ecology, 93(4). doi:ARTN fiw23110.1093/femsec/fiw231
  • Lorberau, K. E., Botnen, S. S., Mundra, S., Aas, A. B., Rozema, J., Eidesen, P. B., & Kauserud, H. (2017). Does warming by open-top chambers induce change in the root-associated fungal community of the arctic dwarf shrub Cassiope tetragona (Ericaceae)? Mycorrhiza, 27(5), 513-524. doi:10.1007/s00572-017-0767-y
  • Skrede, I., Carlsen, T., & Schumacher, T. (2017). Molecular phylogenetics and delimitation of species in Helvella (Ascomycota, Pezizales) in Europe. Persoonia - Molecular Phylogeny and Evolution of Fungi, 39, 201-253. 
  • Aas, A. B., Davey, M. L., & Kauserud, H. (2017). ITS all right mama: Investigating the formation of chimeric sequences in the ITS2 region by DNA metabarcoding analyses of fungal mock communities of different complexities. Molecular Ecology Resources, 17(4), 730-741. doi:10.1111/1755-0998.12622


  • Andrew, C., Heegaard, E., Halvorsen, R., Martinez-Pena, F., Egli, S., Kirk, P. M., . . . Kauserud, H. (2016). Climate impacts on fungal community and trait dynamics. Fungal Ecology, 22, 17-25. doi:10.1016/j.funeco.2016.03.005
  • Hoiland, K., & Botnen, S. (2016). A comparison of aboveground sporocarps and belowground ectomycorrhizal structures of Agaricales, Boletales and Russulales in a sand dune ecosystem on Lista, South-Western Norway. AGARICA, 37, 67-77. 
  • Mundra, S., Halvorsen, R., Kauserud, H., Bahram, M., Tedersoo, L., Elberling, B., . . . Eidesen, P. B. (2016). Ectomycorrhizal and saprotrophic fungi respond differently to long-term experimentally increased snow depth in the high arctic. MicrobiologyOpen, 5(5), 856-869. doi:10.1002/mbo3.375
  • Mysterud, I., Koller, G., Hoiland, K., Carlsen, T., & Sletten, A. (2016). The lamb disease alveld: Search for fungi and bacteria on Narthecium ossifragum foliage and roots. Small Ruminant Research, 136, 179-186. doi:10.1016/j.smallrumres.2016.01.025
  • Rama, T., Davey, M., Norden, J., Halvorsen, R., Blaalid, R., Mathiassen, G., . . . Kauserud, H. (2016). Fungi sailing the arctic ocean: Speciose communities in north atlantic driftwood as revealed by high-throughput amplicon sequencing. Microbial Ecology, 72(2), 295-304. doi:10.1007/s00248-016-0778-9


  • Balasundaram, S. V., Engh, I. B., Skrede, I., & Kauserud, H. (2015). How many DNA markers are needed to reveal cryptic fungal species? Fungal Biology, 119(10), 940-945. doi:10.1016/j.funbio.2015.07.006
  • Botnen, S., Kauserud, H., Carlsen, T., Blaalid, R., & Hoiland, K. (2015). Mycorrhizal fungal communities in coastal sand dunes and heaths investigated by pyrosequencing analyses. Mycorrhiza, 25(6), 447-456. doi:10.1007/s00572-014-0624-1
  • Davey, M., Blaalid, R., Vik, U., Carlsen, T., Kauserud, H., & Eidesen, P. B. (2015). Primary succession of Bistorta vivipara (l.) delabre (Polygonaceae) root-associated fungi mirrors plant succession in two glacial chronosequences. Environmental Microbiology, 17(8), 2777-2790. doi:10.1111/1462-2920.12770
  • Kohler, A., Kuo, A., Nagy, L. G., Morin, E., Barry, K. W., Buscot, F., . . . Co, M. G. I. (2015). Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists (vol 47, pg 410, 2015). Nature Genetics, 47(4). 
  • Mundra, S., Bahram, M., Tedersoo, L., Kauserud, H., Halvorsen, R., & Eidesen, P. B. (2015). Temporal variation of Bistorta vivipara-associated ectomycorrhizal fungal communities in the high arctic. Molecular Ecology, 24(24), 6289-6302. doi:10.1111/mec.13458
  • Mundra, S., Halvorsen, R., Kauserud, H., Muller, E., Vik, U., & Eidesen, P. B. (2015). Arctic fungal communities associated with roots of Bistorta vivipara do not respond to the same fine-scale edaphic gradients as the aboveground vegetation. New Phytologist, 205(4), 1587-1597. doi:10.1111/nph.13216
  • Negard, M., Uhlig, S., Kauserud, H., Andersen, T., Hoiland, K., & Vralstad, T. (2015). Links between genetic groups, indole alkaloid profiles and ecology within the grass-parasitic Claviceps purpurea species complex. Toxins, 7(5), 1431-1456. doi:10.3390/toxins7051431
  • Skrede, I., & Durling, M. B. (2015). Population genomic analyses reveal possible drivers of population divergence. Molecular Ecology, 24(11), 2598-2600. doi:10.1111/mec.13209
Published Dec. 22, 2020 3:05 PM - Last modified Apr. 25, 2022 11:31 AM